| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3423583 = | 46 (0.940) | 3 (0.060) | 3/252 | NT | 6.2% | coding (1741/2211 nt) | PP_3038 | TraC domain‑containing protein |
| ? | NC_002947 | 3423625 = | 46 (0.980) | coding (1783/2211 nt) | PP_3038 | TraC domain‑containing protein | |||||
TTCTTCCTCCTCACGGGTCACCCACCAGATATCACCGGCCTGGTAGCAGAACATGGCCTCAGCCCACAGCTGGTCACGAGCGCGACGCAATGCTTCAAGGTCCACCTTGACGCAAGCGACCGGCCAATAACGCCGGTTACCGGTGGCGTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3423732‑3423583‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgtcAAGGTGGACCTTGAAGCATTGCGTCGCGCTCGTGACCAGCTGTGGGCTGAGGCCATGTTCTGCTACCAGGCCGGTGATATCTGGTGGGTGACCCGTGAGGAGGAAGAACTGTTCACTGCAGAGCAGGAAGAGCGCTTCGTGGTAGAT > NC_002947/3423625‑3423771 TTCTTCCTCCTCACGGGTCACCCACCAGATATCACCGGCCTGGTAGCAGAACATGGCCTCAGCCCACAGCTGGTCACGAGCGCGACGCAATGCTTCAAGGTCCACCTTGACGCAAGCGACCGGCCAATAACGCCGGTTACCGGTGGCGT > 4:40224/1‑149 TCTTCCTCCTCACGGGTCACCCACCAGATATCACCGGCCTGGTAGCAGAACATGGCCTCAGCCCACAGCTGGTCACGAGCGCGACGCAATGCTTCAAGGTCCACCTTGACGCAAGCGACCGGCCAATAACGCCGGTTACCGGTGGCGT < 3:179562/148‑1 ACCTTGACGCAAGCGACCGGCCAATAACGCCGGTTACCGGTGGCGTCAAGGTGGACCTTGAAGCATTGCGTCGCGCTCGTGACCAGCTGTGGGCTGAGGCCATGTTCTGCTACCAGGCCGGTGATATCTGGTG < 7:78576/133‑1 ACCTTGACGCAAGCGACCGGCCAATAACGCCGGTTACCGGTGGCGTCAAGGTGGACCTTGAAGCATTGAGTCGCGCTCGTGACCAGCTGTGGGCTGAGGCCATGTTCTGCTACCAGGCCGGTGATATCTGGTG > 8:78576/1‑133 CTTGACGCAAGCGACCGGCCAATAACGCCGGTTACCGGTGGCGTCAAGGTGGACCTTGAAGCATTGCGTCGCGCTCGTGACCAGCTGTGGGCTGAGGCCATGTTCTGCTACCAGGCCGGTGATATCTGGTGGGTGACCCGTGAGGAGG > 4:36902/1‑148 TCAAGGTGGACCTTGAAGCATTGCGTCGCGCTCGTGACCAGCTGTGGGCTGAGGCCATGTTCTGCTACCAGGCCGGTGATATCTGGTGGGTGACCCGTGAGGAGGAAGAACTGTTCACTGCAGAGCAGGAAGAGCGCTTCGTGGTAGAT < 8:289218/149‑1 TTCTTCCTCCTCACGGGTCACCCACCAGATATCACCGGCCTGGTAGCAGAACATGGCCTCAGCCCACAGCTGGTCACGAGCGCGACGCAATGCTTCAAGGTCCACCTTGACGCAAGCGACCGGCCAATAACGCCGGTTACCGGTGGCGTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3423732‑3423583‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgtcAAGGTGGACCTTGAAGCATTGCGTCGCGCTCGTGACCAGCTGTGGGCTGAGGCCATGTTCTGCTACCAGGCCGGTGATATCTGGTGGGTGACCCGTGAGGAGGAAGAACTGTTCACTGCAGAGCAGGAAGAGCGCTTCGTGGTAGAT > NC_002947/3423625‑3423771 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |