New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3444544 =	41 (0.840)	3 (0.060)	3/254	NT	7.3%	coding (24/846 nt)	gpU	tail formation protein
	?	NC_002947	3444599 =	37 (0.780)					coding (79/846 nt)	gpU	tail formation protein

ATGCCGTCGGCGCCTTTCCGGCCGGCTTCCCCCGCTGCAACCAGGCTGGAAAGTGACGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3444603‑3444544 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgacGGCATGCTGGTACCGCTCAACGGCGCTATCAGCAGCATTACCGGTGCTGCGTCCGAACTGGAAAGCATCCCGTTTCTACCGCCTGAGATGGGCGCCAAGGCGGGCCGCTTGGTGCGCAGCATCGGCGTTGCGCAAGCCCGTGTCGGG  >  NC_002947/3444599‑3444745                                                                                                                                                                                                                 ATGCCGTCGGCGCCTTTCCGGCCGGCTTCCCCCGCTGCAACCAGGCTGGAAAGTGACGACGGCATGCTGGTACCGCTCAACGGCGCTATCAGCAGCATTACCGGTGCTGCGTCCGAACTGGAAAGCATCCCGTTTCTACCGCCTGAGAT                                                            >  3:101609/1‑149     CGTCGGCGCCTTTCCGGCCGGCTTCCCCCGCTGCAACCAGGCTGGAAAGTGACGACGGCATGCTGGTACCGCTCAACGGCGCTATCAGCAGCATTACCGGTGCTGCGTCCGAA                                                                                            >  1:185672/1‑113     CGTCGGCGCCTTTCCGGCCGGCTTCCCCCGCTGCAACCAGGCTGGAAAGTGACGACGGCATGCTGGTACCGCTCAACGGCGCTATCAGCAGCATTACCGGTGCTGCGTCCGAA                                                                                            <  2:185672/113‑1                                                           ACGGCATGCTGGTACCGCTCAACGGCGCTATCAGCAGCATTACCGGTGCTGCGTCCGAACTGGAAAGCATCCCGTTTCTACCGCCTGAGATGGGCGCCAAGGCGGGCCGCTTGGTGCGCAGCATCGGCGTTGCGCAAGCCCGTGTCGGG  <  4:204359/149‑1                                                           ACGGCATGCTGGTACCGCTCAACGGCGCTATCAGCAGCATTACCGGTGCTGCGTCCGAACTGGAAAGCATCCCGTTTCTACCGCCTGAGATGGGCGCCAAGGCGGGCCGCTTGGTGCGCAGCATCGGCGTTGCGCAAGCCCGTGTCGGG  <  6:34204/149‑1                                                            CGGCATGCTGGTACCGCTCAACGGCGCTATCAGCAGCATTACCGGTGCTGCGTCCGAACTGGAAAGCATCCCGTTTCTACCGCCTGAGATGGGCGCCAAGGCGGGCCGCTTGGT                                    <  5:889/114‑1                                                            CGGCATGCTGGTACCGCTCAACGGCGCTATCAGCAGCATTACCGGTGCTGCGTCCGAACTGGAAAGCATCCCGTTTCTACCGCCTGAGATGGGCGCCAAGGCGGGCCGCTTGGT                                    >  6:889/1‑114                                                                                                                                                                                                                 ATGCCGTCGGCGCCTTTCCGGCCGGCTTCCCCCGCTGCAACCAGGCTGGAAAGTGACGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3444603‑3444544 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgacGGCATGCTGGTACCGCTCAACGGCGCTATCAGCAGCATTACCGGTGCTGCGTCCGAACTGGAAAGCATCCCGTTTCTACCGCCTGAGATGGGCGCCAAGGCGGGCCGCTTGGTGCGCAGCATCGGCGTTGCGCAAGCCCGTGTCGGG  >  NC_002947/3444599‑3444745

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.