| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3444544 = | 41 (0.840) | 3 (0.060) | 3/254 | NT | 7.3% | coding (24/846 nt) | gpU | tail formation protein |
| ? | NC_002947 | 3444599 = | 37 (0.780) | coding (79/846 nt) | gpU | tail formation protein | |||||
CGCGAGGTGGCTGCGCGCACGTCCTCGGCGCAGCTGTTCGATCAACCCCACGTTTAAGGAGGGCCTATGGCCTACATGGAACTGCTGGAGTCGTCACTTTCCAGCCTGGTTGCAGCGGGGGAAGCCGGCCGGAAAGGCGCCGACGGCATGCTGGTACCGCTCAACGGCGCTATCAGCAGCATTACCGGTGCTGCGTCCGAACTGGAAAGCATCCCGTTTCTACCGCCTGAGATGGGCGCCAAGGCGGGCCGCTTGGTGCGCAGCATCGGCGTTGCGCAAGCCCGTGTCGGG > NC_002947/3444455‑3444745 | atctcaggcggtagaaacgggatgctttccagttcggacgcagcaccggtaatgctgctgatagcgccgttgagcggtaccagcatgccGTCGTCACTTTCCAGCCTGGTTGCAGCGGGGGAAGCCGGCCGGAAAGGCGCCGACGGCAt > 3:101609‑M1/90‑149 (MQ=255) gAGGTGGCTGCGCGCACGTCCTCGGCGCAGCTGTTCGATCAACCCCACGTTTAAGGAGGGCCTATGGCCTACATGGAACTGCTGGAGTCGTCACTTTCCAGCCTGGTTGCAGCGGGGGAAGCCGGCCGGAAAGGCGCCGACg < 1:294582/142‑1 (MQ=255) gAGGTGGCTGCGCGCACGTCCTCGGCGCAGCTGTTCGATCAACCCCACGTTTAAGGAGGGCCTATGGCCTACATGGAACTGCTGGAGTCGTCACTTTCCAGCCTGGTTGCAGCGGGGGAAGCCGGCCGGAAAGGCGCCGACg > 2:294582/1‑142 (MQ=255) gAGGTGGCTGCGCGCACGTCCTCGGCGCAGCTGTTCGATCAACCCCACGTTTAAGGAGGGCCTATGGCCTACATGGAACTGCTGGAGTCGTCACTTTCCAGCCTGGTTGCAGCGGGGGAAGCCGGCCGGAAAGGCGCCGACGGCATGCt < 8:207008/149‑1 (MQ=255) gCTGCGCGCACGTCCTCGGCGCAGCTGTTCGATCAACCCCACGTTTAAGGAGGGCCTATGGCCTACATGGAACTGCTGGAGTCGTCACTTTCCAGCCTGGTTGCAGCGGGGGAAGCCGGCCGGAAAGGCGCCGACGGCATGCTGGTAcc < 6:118213/149‑1 (MQ=255) cGTCCTCGGCGCAGCTGTTCGATCAACCCCACGTTTAAGGAGGGCCTATGGCCTACATGGAACTGCTGGAGTCGTCACTTTCCAGCCTGGTTGCAGCGGGGGAAGCCGGCCGGAAAGGCGCCGACGGCATGCTGGTACCGCTCAACGgc > 3:265800/1‑149 (MQ=255) cTCGGCGCAGCTGTTCGATCAACCCCACGTTTAAGGAGGGCCTATGGCCTACATGGAACTGCTGGAGTCGTCACTTTCCAGCCTGGTTGCAGCGGGGGAAGCCGGCCGGAAAGGCGCCGACGGCATGCTg < 6:49444/130‑1 (MQ=255) cTCGGCGCAGCTGTTCGATCAACCCCACGTTTAAGGAGGGCCTATGGCCTACATGGAACTGCTGGAGTCGTCACTTTCCAGCCTGGTTGCAGCGGGGGAAGCCGGCCGGAAAGGCGCCGACGGCATGCTg > 5:49444/1‑130 (MQ=255) gcgcAGCTGTTCGATCAACCCCACGTTTAAGGAGGGCCTATGGCCTACATGGAACTGCTGGAGTCGTCACTTTCCAGCCTGGTTGCAGCGGGGGAAGCCGGCCGGAAAGGCGCCGACGGCATGCTGGTACCGCTCAACGGCGCTATcag < 3:217954/149‑1 (MQ=255) gcgcAGCTGTTCGATCAACCCCACGTTTAAGGAGGGCCTATGGCCTACATGGAACTGCTGGAGTCGTCACTTTCCAGCCTGGTTGCAGCGGGGGAAGCCGGCCGGAAAGGCGCCGACGGCATGCTGGTACCGCTCAACGGCGCTATcag < 3:213890/149‑1 (MQ=255) aGCTGTTCGATCAACCCCACGTTTAAGGAGGGCCTATGGCCTACATGGAACTGCTGGAGTCGTCACTTTCCAGCCTGGTTGCAGCGGGGGAAGCCGGCCGGAAAGGCGCCGACGGCATGCTGGTACCGCTCAACGGCGCTATcagcag > 2:37994/1‑148 (MQ=255) ttcggacgcagcaccggtaatgctgctgatagcgccgttgagcggtaccagcatgccGTCGTCACTTTCCAGCCTGGTTGCAGCGGGGGAAGCCGGCCGGAAAGGCGCCGACg > 1:185672‑M1/58‑113 (MQ=255) ttcggacgcagcaccggtaatgctgctgatagcgccgttgagcggtaccagcatgccGTCGTCACTTTCCAGCCTGGTTGCAGCGGGGGAAGCCGGCCGGAAAGGCGCCGACg < 2:185672‑M1/56‑1 (MQ=255) tCAACCCCACGTTTAAGGAGGGCCTATGGCCTACATGGAACTGCTGGAGTCGTCACTTTCCAGCCTGGTTGCAGCGGGGGAAGCCGGCCGGAAAGGCGCCGACGGCATGCTGGTACCGCTCAACGGCGCTATCAGCAGCATTACCGGtg > 1:303086/1‑149 (MQ=255) cACGTTTAAGGAGGGCCTATGGCCTACATGGAACTGCTGGAGTCGTCACTTTCCAGCCTGGTTGCAGCGGGGGAAGCCGGCCGGAAAGGCGCCGACGGCATGCTGGTACCGCTCAACGGCGCTATCAGCAGCATTACCGGTGCTGCGTc > 2:140760/1‑149 (MQ=255) gTTTAAGGAGGGCCTATGGCCTACATGGAACTGCTGGAGTCGTCACTTTCCAGCCTGGTTGCAGCGGGGGAAGCCGGCCGGAAAGGCGCCGACGGCATGCTGGTACCGCTCAACGGCGCTATCAGCAGCATTACCGGTGCTGCGTCCg > 1:202380/1‑148 (MQ=255) gTTTAAGGAGGGCCTATGGCCTACATGGAACTGCTGGAGTCGTCACTTTCCAGCCTGGTTGCAGCGGGGGAAGCCGGCCGGAAAGGCGCCGACGGCATGCTGGTACCGCTCAACGGCGCTATCAGCAGCATTACCGGTGCTGCGTCCg > 4:153877/1‑148 (MQ=255) tttAAGGAGGGCCTATGGCCTACATGGAACTGCTGGAGTCGTCACTTTCCAGCCTGGTTGCAGCGGGGGAAGCCGGCCGGAAAGGCGCCGACGGCATGCTGGTACCGCTCAACGGCGCTATCAGCAGCATTACCGGTGCTGCGTCCGaa < 3:19628/149‑1 (MQ=255) ttAAGGAGGGCCTATGGCCTACATGGAACTGCTGGAGTCGTCACTTTCCAGCCTGGTTGCAGCGGGGGAAGCCGGCCGGAAAGGCGCCGACGGCATGCTGGTACCGCTCAACGGCGCTATCAGCAGCATTACCGGTGCTGCGTCCGAAc > 1:298745/1‑149 (MQ=255) aggaggGCCTATGGCCTACATGGAACTGCTGGAGTCGTCACTTTCCAGCCTGGTTGCAGCGGGGGAAGCCGGCCGGAAAGGCGCCGACGGCATGCTGGTACCGCTCAACGGCGCTATCAGCAGCATTACCGGTGCTGCGTCCGAACTg < 3:124769/148‑1 (MQ=255) aggGCCTATGGCCTACATGGAACTGCTGGAGTCGTCACTTTCCAGCCTGGTTGCAGCGGGGGAAGCCGGCCGGAAAGGCGCCGACGGCATGCTGGTACCGCTCAACGGCGCTATCAGCAGCATTACCGGTGCTGCGTCCGAACTGGaaa < 2:298745/149‑1 (MQ=255) aggGCCTATGGCCTACATGGAACTGCTGGAGTCGTCACTTTCCAGCCTGGTTGCAGCGGGGGAAGCCGGCCGGAAAGGCGCCGACGGCATGCTGGTACCGCTCAACGGCGCTATCAGCAGCATTACCGGTGCTGCGTCCGAACTGGaaa < 4:265800/149‑1 (MQ=255) cTATGGCCTACATGGAACTGCTGGAGTCGTCACTTTCCAGCCTGGTTGCAGCGGGGGAAGCCGGCCGGAAAGGCGCCGACGGCATGCTGGTACCGCTCAACGGCGCTATCAGCAGCATTACCGGTGCTGCGTCCGAACTGGAAAGCATc < 2:303086/149‑1 (MQ=255) gCCTACATGGAACTGCTGGAGTCGTCACTTTCCAGCCTGGTTGCAGCGGGGGAAGCCGGCCGGAAAGGCGCCGACGGCATGCTGGTACCGCTCAACGGCGCTATCAGCAGCATTACCGGTGCTGCGTCCGAACTGGAAAGCATCCCGtt > 3:204359/1‑149 (MQ=255) gCCTACATGGAACTGCTGGAGTCGTCACTTTCCAGCCTGGTTGCAGCGGGGGAAGCCGGCCGGAAAGGCGCCGACGGCATGCTGGTACCGCTCAACGGCGCTATCAGCAGCATTACCGGTGCTGCGTCCGAACTGGAAAGCATCCCGt < 2:202380/148‑1 (MQ=255) ctgctgGAGTCGTCACTTTCCAGCCTGGTTGCAGCGGGGGAAGCCGGCCGGAAAGGCGCCGACGGCATGCTGGTACCGCTCAACGGCGCTATCAGCAGCATTACCGGTGCTGCGTCCGAACTGGAAAGCATCCCGTTTCTACCGCCTga < 7:125760/149‑1 (MQ=255) gctgGAGTCGTCACTTTCCAGCCTGGTTGCAGCGGGGGAAGCCGGCCGGAAAGGCGCCGACGGCATGCTGGTACCGCTCAACGGCGCTATCAGCAGCATTACCGGTGCTGCGTCCGAACTGGAAAGCATCCCGTTTCTACCGCCt > 5:108864/1‑145 (MQ=255) atgccgtcggcgcctttccggccggcttcccccgctgcaaccaggctggaaagtgacgacGGCATGCTGGTACCGCTCAACGGCGCTATCAGCAGCATTACCGGTGCTGCGTCCGAACTGGAAAGCATCCCGTTTCTACCGCCTGAGAt > 3:101609‑M2/61‑149 (MQ=255) tgGAGTCGTCACTTTCCAGCCTGGTTGCAGCGGGGGAAGCCGGCCGGAAAGGCGCCGACGGCATGCTGGTACCGCTCAACGGCGCTATCAGCAGCATTACCGGTGCTGCGTCCGAACTGGAAAGCATCCCGTTTCTACCGCCTGAGATg > 6:15824/1‑149 (MQ=255) cgtcggcgcctttccggccggcttcccccgctgcaaccaggctggaaagtgacgacGGCATGCTGGTACCGCTCAACGGCGCTATCAGCAGCATTACCGGTGCTGCGTCCGaa > 1:185672‑M2/57‑113 (MQ=255) cgtcggcgcctttccggccggcttcccccgctgcaaccaggctggaaagtgacgacGGCATGCTGGTACCGCTCAACGGCGCTATCAGCAGCATTACCGGTGCTGCGTCCGaa < 2:185672‑M2/57‑1 (MQ=255) tcACTTTCCAGCCTGGTTGCAGCGGGGGAAGCCGGCCGGAAAGGCGCCGACGGCATGCTGGTACCGCTCAACGGCGCTATCAGCAGCATTACCGGTGCTGCGTCCGAACTGGAAAGCATCCCGTTTCTACCGCCTGAGATGTGCGcc > 8:95969/1‑147 (MQ=255) tcACTTTCCAGCCTGGTTGCAGCGGGGGAAGCCGGCCGGAAAGGCGCCGACGGCATGCTGGTACCGCTCAACGGCGCTATCAGCAGCATTACCGGTGCTGCGTCCGAACTGGAAAGCATCCCGTTTCTACCGCCTGAGATGGGCGcc > 4:60941/1‑147 (MQ=255) cACTTTCCAGCCTGGTTGCAGCGGGGGAAGCCGGCCGGAAAGGCGCCGACGGCATGCTGGTACCGCTCAACGGCGCTATCAGCAGCATTACCGGTGCTGCGTCCGAACTGGAAAGCATCCCGttt < 8:208381/125‑1 (MQ=255) tttCCAGCCTGGTTGCAGCGGGGGAAGCCGGCCGGAAAGGCGCCGACGGCATGCTGGTACCGCTCAACGGCGCTATCAGCAGCATTACCGGTGCTGCGTCCGAACTGGaaa < 6:110344/111‑1 (MQ=255) tCCAGCCTGGTTGCAGCGGGGGAAGCCGGCCGGAAAGGCGCCGACGGCATGCTGGTACCGCTCAACGGCGCTATCAGCAGCATTACCGGTGCTGCGTCCGAACTGGAAAGCATCCCGTTTCTACCGCCTGAGATGGGCGCCAAGGCgg < 1:140760/148‑1 (MQ=255) ccTGGTTGCAGCGGGGGAAGCCGGCCGGAAAGGCGCCGACGGCATGCTGGTACCGCTCAACGGCGCTATCAGCAGCATTACCGGTGCTGCGTCCGAACTGGAAAGCATCCCGTTTCTACCGCCTGAGATGGGCGCCAAGGCGGGCCGCt > 7:239979/1‑149 (MQ=255) gTTGCAGCGGGGGAAGCCGGCCGGAAAGGCGCCGACGGCATGCTGGTACCGCTCAACGGCGCTATCAGCAGCATTACCGGTGCTGCGTCCGAACTGGAAAGCATCCCGTTTCTACCGCCTGAGATGGGCGCCAAGGCGGGCCGCTTg < 3:153877/147‑1 (MQ=255) gTTGCAGCGGGGGAAGCCGGCCGGAAAGGCGCCGACGGCATGCTGGTACCGCTCAACGGCGCTATCAGCAGCATTACCGGTGCTGCGTCCGAACTGGAAAGCATCCCGTTTCTACCGCCTGAGATGGGCGCCAAGGCGGGCCGCTTGGt < 1:37994/149‑1 (MQ=255) gCAGCGGGGGAAGCCGGCCGGAAAGGCGCCGACGGCATGCTGGTACCGCTCAACGGCGCTATCAGCAGCATTACCGGTGCTGCGTCCGAACTGGAAAGCATCCCGTTTCTACCGCCTGAGATGGGCGCCAAGGCGGGCCGCTTGGTgcg > 8:46149/1‑149 (MQ=255) gCGGGGGAAGCCGGCCGGAAAGGCGCCGACGGCATGCTGGTACCGCTCAACGGCGCTATCAGCAGCATTACCGGTGCTGCGTCCGAACTGGAAAGCATCCCGTTTCTACCGCCTGAGATGGGCGCCAAGGCGGGCCGCTTGGTgcgc < 1:248184/147‑1 (MQ=255) gCGGGGGAAGCCGGCCGGAAAGGCGCCGACGGCATGCTGGTACCGCTCAACGGCGCTATCAGCAGCATTACCGGTGCTGCGTCCGAACTGGAAAGCATCCCGTTTCTACCGCCTGAGATGGGCGCCAAGGCGGGCCGCTTGGTgcgc > 2:248184/1‑147 (MQ=255) ccggccggAAAGGCGCCGACGGCATGCTGGTACCGCTCAACGGCGCTATCAGCAGCATTACCGGTGCTGCGTCCGAACTGGAAAGCATCCCGTTTCTACCGCCTGAGATGGGCGCCAAGGCGGGCCGCTTGGTGCGCAGCATCGGCGtt > 5:34204/1‑149 (MQ=255) ggccggAAAGGCGCCGACGTCATGCTGGTACCGCTCAACGGCGCTATCAGCAGCATTACCGGTGCTGCGTCCGAACTGGAAAGCATCCCGTTTCTACCGCCTGAGATGGGCGCCAAGGCGGGCCGCTTGGTGCGCAGCATCGGCGTTgc < 6:84963/149‑1 (MQ=255) ggccggAAAGGCGCCGACGGCATGCTGGTACCGCTCAACGGCGCTATCAGCAGCATTACCGGTGCTGCGTCCGAACTGGAAAGCATCCCGTTTCTACCGCCTGAGATGGGCGCCAAGGCGGGCCGCTTGGTGCGCAGCATCGACGtgac > 5:138945/1‑146 (MQ=255) acGGCATGCTGGTACCGCTCAACGGCGCTATCAGCAGCATTACCGGTGCTGCGTCCGAACTGGAAAGCATCCCGTTTCTACCGCCTGAGATGGGCGCCAAGGCGGGCCGCTTGGTGCGCAGCATCGGCGTTGCGCAAGCCCGTGTCggg < 4:204359‑M2/147‑1 (MQ=255) acGGCATGCTGGTACCGCTCAACGGCGCTATCAGCAGCATTACCGGTGCTGCGTCCGAACTGGAAAGCATCCCGTTTCTACCGCCTGAGATGGGCGCCAAGGCGGGCCGCTTGGTGCGCAGCATCGGCGTTGCGCAAGCCCGTGTCggg < 6:34204‑M2/147‑1 (MQ=255) cGGCATGCTGGTACCGCTCAACGGCGCTATCAGCAGCATTACCGGTGCTGCGTCCGAACTGGAAAGCATCCCGTTTCTACCGCCTGAGATGGGCGCCAAGGCGGGCCGCTTGGt < 5:889‑M2/113‑1 (MQ=255) cGGCATGCTGGTACCGCTCAACGGCGCTATCAGCAGCATTACCGGTGCTGCGTCCGAACTGGAAAGCATCCCGTTTCTACCGCCTGAGATGGGCGCCAAGGCGGGCCGCTTGGt > 6:889‑M2/2‑114 (MQ=255) | CGCGAGGTGGCTGCGCGCACGTCCTCGGCGCAGCTGTTCGATCAACCCCACGTTTAAGGAGGGCCTATGGCCTACATGGAACTGCTGGAGTCGTCACTTTCCAGCCTGGTTGCAGCGGGGGAAGCCGGCCGGAAAGGCGCCGACGGCATGCTGGTACCGCTCAACGGCGCTATCAGCAGCATTACCGGTGCTGCGTCCGAACTGGAAAGCATCCCGTTTCTACCGCCTGAGATGGGCGCCAAGGCGGGCCGCTTGGTGCGCAGCATCGGCGTTGCGCAAGCCCGTGTCGGG > NC_002947/3444455‑3444745 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |