| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3555318 = | 31 (0.630) | 3 (0.060) | 3/248 | NT | 9.2% | coding (934/1203 nt) | PP_3139 | group 1 family glycosyl transferase |
| ? | NC_002947 | 3555365 = | 30 (0.650) | coding (981/1203 nt) | PP_3139 | group 1 family glycosyl transferase | |||||
CAGGCAGTCGGCCATGGCTGTTGCCAACTCGTCCACGGCACCGGCTGGGAACAGCCAGCCGTTTTCGCCAGGCCGCACCAGCTCGGGGATACCCGCTACATAGGTGGTCAGCACGGGCCGGCGCAAGGCCATGGCCTCCATGATGACCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3555467‑3555318‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgaccacCTATGTAGCGGGTATCCCCGAGCTGGTGCGGCCTGGCGAAAACGGCTGGCTGTTCCCAGCCGGTGCCGTGGACGAGTTGGCAACAGCCATGGCCGACTGCCTGGCGCAACCGGCCGAGGTACTGCAGCGCATGGGCGAGGTGG > NC_002947/3555365‑3555507 CAGGCAGTCGGCCATGGCTGTTGCCAACTCGTCCACGGCACCGGCTGGGAACAGCCAGCCGTTTTCGCCAGGCCGCACCAGCTCGGGGATACCCGCTACATAGGTGGTCAGCACGGGCCGGCGCAAGGCCATGGCCTCCATGATGACCA > 6:278733/1‑149 GGTGGTCAGCACGGGCCGGCGCAAGGCCATGGCCTCCATGATGACCACCTATGTAGCGGGTATCCCCGAGCTGGTGCGGCCTGGCGAAAACGGCTGGCTGTTCCCAGCCGGTGCCGTGGACGAGTTGGCAACAGCCATGGCCGACTGCC > 5:30359/1‑149 TGGTCAGCACGGGCCGGCGCAAGGCCATGGCCTCCATGATGACCACCTATGTAGCGGGTATCCCCGAGCTGGTGCGGCCTGGCGAAAACGGCTGGCTGTTCCCAGCCGGTGCCGTGGACGAGTTGGCAACAGCCATGGCCGACTGCCTG > 4:287235/1‑149 GTCAGCACGGGCCGGCGCAAGGCCATGGCCTCCATGATGACCACCTATGTAGCGGGTATCCCCGAGCTGGTGCGGCCTGGCGAAAACGGCTGGCTGTTCCCAGCCGGTGCCGTGGACGAGTTGGCAACAGCCATGGCCGACTGCCTGGC < 3:287235/149‑1 GACCACCTATGTAGCGGGTATCCCCGAGCTGGTGCGGCCTGGCGAAAACGGCTGGCTGTTCCCAGCCGGTGCCGTGGACGAGTTGGCAACAGCCATGGCCGACTGCCTGGCGCAACCGGCCGAGGTACTGCAGCGCATGGGCGAGGTGG > 1:32515/1‑149 ACCACCTATGTAGCGGGTATCCCCGAGCTGGTGCGGCCTGGCGAAAACGGCTGGCTGTTCCCAGCCGGTGCCGTGGACGAGTTGGCAACAGCCATGGCCGACTGCCTGGCGCAACCGGCCGAGGTACTGC > 7:217514/1‑130 ACCACCTATGTAGCGGGTATCCCCGAGCTGGTGCGGCCTGGCGAAAACGGCTGGCTGTTCCCAGCCGGTGCCGTGGACGAGTTGGCAACAGCCATGGCCGACTGCCTGGCGCAACCGGCCGAGGTACTGC < 8:217514/130‑1 CAGGCAGTCGGCCATGGCTGTTGCCAACTCGTCCACGGCACCGGCTGGGAACAGCCAGCCGTTTTCGCCAGGCCGCACCAGCTCGGGGATACCCGCTACATAGGTGGTCAGCACGGGCCGGCGCAAGGCCATGGCCTCCATGATGACCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3555467‑3555318‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgaccacCTATGTAGCGGGTATCCCCGAGCTGGTGCGGCCTGGCGAAAACGGCTGGCTGTTCCCAGCCGGTGCCGTGGACGAGTTGGCAACAGCCATGGCCGACTGCCTGGCGCAACCGGCCGAGGTACTGCAGCGCATGGGCGAGGTGG > NC_002947/3555365‑3555507 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |