New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 380268142 (0.860)4 (0.090) 4/248 NT 8.8% coding (1236/3048 nt) PP_3361 aminotransferase
?NC_002947 = 3802739 43 (0.930)coding (1178/3048 nt) PP_3361 aminotransferase

CGGTGCCGGCAATCGGTGCGTACAGCGGCGTACCTGCTGGCATCAGCAAATCTACTCCCACATGCAGGGTCCGGTGCTGCCCCTTGATGAAGCGAGACTCAAAGGCGCTGTCGGTATAGACGGCACGTACCTCGCCCCATGGCCCGATGCCCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3802527‑3802681
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccagcAGCGCCCTGCAGATGCGACGCGGTGGTGGAATGAATTCTCTGCCGCGCACAAGGCCCCGCTGGGCATCGGGCCATGGGGCGAGGTACGTGCCGTCTATACCGACAGCGCCTTTGAGTCTCGCTTCATCAAGGGGCAGCACCGGACC  <  NC_002947/3802739‑3802594
                                                                                                                                                                                                                                                                                                             
CGGTGCCGGCAATCGGTGCGTACAGCGGCGTACCTGCTGGCATCAGCAAATCTACTCCCACATGCAGGGTCCGGTGCTGCCCCTTGATGAAGCGAGACTCAAAGGCGCTGTCGGTATAGACGGCACGTACCTCGCCCCATGGCCCGATG                                                                                                                                                          <  3:111251/149‑1
  GTGCCGGCAATCGGTGCGTACAGCGGCGTAGCTGCTGGCATCAGCAAATCTACTCCCACATGCCGGGTCCGTTGCTGCCCCTTGATGATGCGAGACTCAATGGCGCTGGCGGTATAGACGGCACGTACCTCGCCCCATGGCCCGATGCC                                                                                                                                                        <  6:206570/149‑1
                                       GCATCAGCAAATCTACTCCCACATGCAGGGTCCGGTGCTGCCCCTTGATGAAGCGAGACTCAAAGGCGCTGTCGGTATAGACGGCACGTACCTCGCCCCATGGCCCGATGCCC                                                                                                                                                       <  7:207820/113‑1
                                       GCATCAGCAAATCTACTCCCACATGCAGGGTCCGGTGCTGCCCCTTGATGAAGCGAGACTCAAAGGCGCTGTCGGTATAGACGGCACGTACCTCGCCCCATGGCCCGATGCCC                                                                                                                                                       >  8:207820/1‑113
                                                         CCACATGCAGGGTCCGGTGCTGCCCCTTGATGAAGCGAGACTCAAAGGCGCTGTCGGTATAGACGGCACGTATCTCGCCCCATGGCCCGATGCCCAGCAGCGCCCTGCAGATGCGACGCGGTGGTGGAATGAATTCTCTGCCGCGCAC                                                                                                  >  3:138618/1‑148
                                                                     TCCGGTGCTGCCCCTTGATGAAGCGAGACTCAAAGGCGCTGTCGGTATAGACGGCACGTACCTCGCCCCATGGCCCGATGCCCAGCAGCGCCCTGCAGATGCGACGCGGTGGTGGAATGAATTCTCTGCCGCGCACAAGGCCCCGCTGG                                                                                     <  7:32610/149‑1
                                                                       CGGTGCTGCCCCTTGATGAAGCGAGACTCAAAGGCGCTGTCGGTATAGACGGCACGTATCTCGCCCCATGGCCCGATGCCCAGCAGCGCCCTGCAGATGCGACGCGGTGGTGGAATGAATTCTCTGCCGCGCACAAGGCCCCGCTGGG                                                                                    <  4:138618/148‑1
                                                                                     GATGAAGCGAGACTCAAAGGCGCTGTCGGTATAGACGGCACGTACCTCGCCCCATTG‑CCTCGGCCCAGCAGCGCCCTGCAGATGCGACGCGGTGGTGGAATGAATTCTCTGCCGCGCACAAGGCCCCGCTGGGCATCGGGCCATGGGG                                                                     <  3:269702/148‑1
                                                                                                                                                      CCAGCAGCGCCCTGCAGATGCGACGCGGTGGTGGAATGAATTCTCTGCCGCGCACAAGGCCCCGCTGGGCATCGGGCCATGGGGCGAGGTACGTGCCGTCTATACCGACAGCGCCTTTGAGTCTCGCTTCATCAAGGGGCAGCACCGGA    <  4:197497/149‑1
                                                                                                                                                        AGCAGCGCCCTGCAGATGCGACGCGGTGGTGGAATGAATTCTCTGCCGCGCACAAGGCCCCGCTGGGCATCGGGCCATGGGGCGAGGTACGTGCCGTCTATACCGACAGCGCCTTTGAGTCTCGCTTCATCAAGGGGCAGCACCGGACC  <  2:141397/149‑1
                                                                                                                                                                                                                                                                                                             
CGGTGCCGGCAATCGGTGCGTACAGCGGCGTACCTGCTGGCATCAGCAAATCTACTCCCACATGCAGGGTCCGGTGCTGCCCCTTGATGAAGCGAGACTCAAAGGCGCTGTCGGTATAGACGGCACGTACCTCGCCCCATGGCCCGATGCCCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3802527‑3802681
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccagcAGCGCCCTGCAGATGCGACGCGGTGGTGGAATGAATTCTCTGCCGCGCACAAGGCCCCGCTGGGCATCGGGCCATGGGGCGAGGTACGTGCCGTCTATACCGACAGCGCCTTTGAGTCTCGCTTCATCAAGGGGCAGCACCGGACC  <  NC_002947/3802739‑3802594

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.