New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 390028430 (0.610)6 (0.130) 4/246 NT 16.6% coding (692/1620 nt) PP_3443 glyceraldehyde‑3‑phosphate dehydrogenase
?NC_002947 = 3900313 32 (0.700)coding (721/1620 nt) PP_3443 glyceraldehyde‑3‑phosphate dehydrogenase

CCTGTGCATGGGGCCCTACAACTACCCGCTGAACGAGACCTTCACCACGCTCATCCCGGCGCTGATCATGGGCAACACGGTGGTGTTCAAGCCGGCCAAGTTCGGCGTACTGCTGATCCGACCCTTGCTCGAAGCGTTCCGCGACAGCTTCCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3900129‑3900284
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcccggcCGCGTCCATAGATGACATTGATCACGCCTGCCGGGAAGCTGTCGCGGAACGCTTCGAGCAAGGGTCGGATCAGCAGTACGCCGAACTTGGCCGGCTTGAACACCACCGTGTTGCCCATGATCAGCGCCGGGATGAGCGTGGTGAA  <  NC_002947/3900313‑3900169
                                                                                                                                                                                                                                                                                                             
CCTGTGCATGGGGCCCTACAACTACCCGCTGAACGAGACCTTCACCACGCTCATCCCGGCGCTGATCATGGGCAACACGGTGGTGTTCAAGCCGGCCAAGTTCGGCGTACTGCTGATCCGACCCTTGCTCGAAGCGTTCCGCGACAGCT                                                                                                                                                          >  6:289641/1‑149
    TGCATGGGGCCCTACAACTACCCGCTGAACGAGACCTTCACCACGCTCATCCCGGCGCTGATCATGGGCAACACGGTGGTGTTCAAGCCGGCCAAGTTCGGCGTACTGCTGATCCGACCCTTGCTCGAAGCGTTCCGCGACAGCTTC                                                                                                                                                        <  7:4714/147‑1
                     CTACCCGCTGAACGAGACCTTCACCACGCTCATCCCGGCGCTGATCATGGGCAACACGGTGGTGTTCAAGCCGGCCAAGTTCGGCGTACTGCTGATCCGACCCTTGCTCGAAGCGTTCCGCGACAGCTTCCCGGCCGCGTCCATAGAT                                                                                                                                      >  7:200194/1‑148
                                          CACCACGCTCCTCCCGGCGCTGCTCATGGGCAACACGGCGGTGTTCAAGCCGCCCCAGTTCGGCGTACTGCTGATCCGACCCTTGCTCGAAGCGTTCCGCGACAGCTTCCCGGCCGCGTCCATAGATGACATTGATCACGCCTGCCGG                                                                                                                 <  2:272940/148‑1
                                          CACCACGCTCATCCCGGCGCTGATCATGGGCAACACGGTGGTGTTCAAGCCGGCCAAGTTCGGCGTACTGCTGATCCGACCCTTGCTCGAAGCGTTCCGCGACAGCTTCCCGGCCGCGTCCATAGATGACATTGATCACGCCTGCCGG                                                                                                                 <  6:186056/148‑1
                                            CCACGCTCATCCCGGCGCTGATCATGTTCAACAAGGTGGTTTTCAAGCCGGCCAAGTTCGGCGTACTGCTGATCCGACCCTTGCTCGAAGCGTTCCGCGACAGCTTCCCGGCCGCGTCCATAGATGACATTGATCACGCCTGCCGGGAA                                                                                                              <  8:200194/149‑1
                                                                                                CAAGTTCGGCGTACTGCTGATCCGACCCTTGCTCGAAGCGTTCCGCGACAGCTTCCCGGCCGCGTCCATAGATGACATTGATCACGCCTGCCGG                                                                                                                 <  3:266300/94‑1
                                                                                                CAAGTTCGGCGTACTGCTGATCCGACCCTTGCTCGAAGCGTTCCGCGACAGCTTCCCGGCCGCGTCCATAGATGACATTGATCACGCCTGCCGG                                                                                                                 >  4:266300/1‑94
                                                                                                                                                    TTCCCGGCCGCGTCCATAGATGACATTGATCACGCCTGCCGGGAAGCTGTCGCGGAACGCTTCGAGCAAGGGTCGGATCAGCAGTACGCCGAACTTGGCCGGCTTGAACACCACCGTGTTGCCCATGATCAGCGCCGGGATGAGCGTGG      >  4:192206/1‑149
                                                                                                                                                        CGGCCGCGTCCATAGATGACATTGATCACGCCTGCCGGGAAGCTGTCGCGGAACGCTTCGAGCAAGGGTCGGATCAGCAGTACGCCGAACTTGGCCGGCTTGAACACCACCGTGTTGCCCATGATCAGCGCCGGGATGAGCGTGGTGAA  <  4:109421/149‑1
                                                                                                                                                                                                                                                                                                             
CCTGTGCATGGGGCCCTACAACTACCCGCTGAACGAGACCTTCACCACGCTCATCCCGGCGCTGATCATGGGCAACACGGTGGTGTTCAAGCCGGCCAAGTTCGGCGTACTGCTGATCCGACCCTTGCTCGAAGCGTTCCGCGACAGCTTCCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3900129‑3900284
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcccggcCGCGTCCATAGATGACATTGATCACGCCTGCCGGGAAGCTGTCGCGGAACGCTTCGAGCAAGGGTCGGATCAGCAGTACGCCGAACTTGGCCGGCTTGAACACCACCGTGTTGCCCATGATCAGCGCCGGGATGAGCGTGGTGAA  <  NC_002947/3900313‑3900169

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.