New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3900284	30 (0.610)	6 (0.130)	4/246	NT	16.6%	coding (692/1620 nt)	PP_3443	glyceraldehyde‑3‑phosphate dehydrogenase
	?	NC_002947	= 3900313	32 (0.700)					coding (721/1620 nt)	PP_3443	glyceraldehyde‑3‑phosphate dehydrogenase

TTCACCACGCTCATCCCGGCGCTGATCATGGGCAACACGGTGGTGTTCAAGCCGGCCAAGTTCGGCGTACTGCTGATCCGACCCTTGCTCGAAGCGTTCCGCGACAGCTTCCCGGCAGGCGTGATCAATGTCATCTATGGACGCGGCCGGGAAACGGTGAGCGCGCTGATGGCCAGCGGCAAGGTCGATGTATTCGCCTTCATCGGCACCCACAAGGCCGCCAGCGACCTGAAGAAACTGCACCCACGCCCGCATCGTCTGCGCGCCGCACTGGGCCTGGACGCCAA  >  NC_002947/3900169‑3900455                                                                                                                                                 |                                                                                                                                               ttCACCACGCTCATCCCGGCGCTGATCATGGGCAACACGGTGGTGTTCAAGCCGGCCAAGTTCGGCGTACTGCTGATCCGACCCTTGCTCGAAGCGTTCCGCGACAGCTTCCCGGCAGGCGTGATCAATGTCATCTATGGACGCGgccg                                                                                                                                            <  4:109421‑M2/149‑5 (MQ=255)     ccacGCTCATCCCGGCGCTGATCATGGGCAACACGGTGGTGTTCAAGCCGGCCAAGTTCGGCGTACTGCTGATCCGACCCTTGCTCGAAGCGTTCCGCGACAGCTTCCCGGCAGGCGTGATCAATGTCATCTATGGACGCGgccgggaa                                                                                                                                        >  4:192206‑M2/1‑141 (MQ=255)              tCCCGGCGCTGATCATGGGCAACACGGTGGTGTTCAAGCCGGCCAAGTTCGGCGTACTGCTGATCCGACCCTTGCTCGAAGCGTTCCGCGACAGCTTCCCGGCAGGCGTGATCAATGTCATCTATGGACGCGGCCGGGAAACGGTGAgc                                                                                                                               >  7:195671/1‑149 (MQ=255)                  ggCGCTGATCATGGGCAACACGGTGGTGTTCAAGCCGGCCAAGTTCGGCGTACTGCTGATCCGACCCTTGCTCGAAGCGTTCCGCGACAGCTTCCCGGCAGGCGTGATCAATGTCATCTATGGACGCGGCCGGGAAACGGTGAgcgcgc                                                                                                                           <  2:158313/149‑1 (MQ=255)                    cgcTGATCATGGGCAACACGGTGGTGTTCAAGCCGGCCAAGTTCGGCGTACTGCTGATCCTACCCTTGCTCGAAGCGTTCCGCGACAGCTTCCCGGCAGGCGTGATCAATGTCATCTATGGACGCGGCCGGGAAACGGTGAGCGCGCTg                                                                                                                         <  2:221452/149‑1 (MQ=255)                     gcTGATCATGGGCAACACGGTGGTGTTCAAGCCGGCCAAGTTCGGCGTACTGCTGATCCGACCCTTGCTCGAAGCGTTCCGCGACAGCTTCCCGGCAGGCGTGATCAATGTCATCTATGGACGCGGCCGGGAAACGGTGAGCGCGCTGa                                                                                                                        <  4:7421/149‑1 (MQ=255)                       tGATCATGGGCAACACGGTGGTGTTCAAGCCGGCCAAGTTCGGCGTACTGCTGATCCGACCCTTGCTCGAAGCGTTCCGCGACAGCTTCCCGGCAGGCGTGATCAATGTCATCTATGGACGCGGCCGGGAAACGGTGAGCGCGCTGATg                                                                                                                      >  3:280787/1‑149 (MQ=255)                         aTCATGGGCAACACGGTGGTGTTCAAGCCGGCCAAGTTCGGCGTACTGCTGATCCGACCCTTGCTCGAAGCGTTCCGCGACAGCTTCCCGGCAGGCGTGATCAATGTCATCTATGGACGCGGCCGGGAAACGGTGAGCGCGCTGATg                                                                                                                      <  8:127697/147‑1 (MQ=255)                         aTCATGGGCAACACGGTGGTGGTCAAGCCGGCCAAGTTCGGCGTACTGCTGATCCGACCCTTGCTCGAAGCGTTCCGCGACAGCTTCCCGGCAGGCGTGATCAATGTCATCTATGGACGCGGCCGGGAAACGGTGAGCGCGCTGATg                                                                                                                      <  4:167261/147‑1 (MQ=255)                          tCATGGGCAACACGGTGGTGTTCAAGCCGGCCAAGTTCGGCGTACTGCTGATCCGACCCTTGCTCGAAGCGTTCCGCGACAGCTTCCCGGCAGGCGTGATCAATGTCATCTATGGACGCGGCCGGGAAACGGTGAGCGCGCTGATGGc                                                                                                                    >  6:298106/1‑148 (MQ=255)                               ggCAACAGGGTGGTGTTCAAGCCGGCCAAGTTCGGCGTACTGCTGATCCGACCCTTGCTCGAAGCGTTCCGCGACAGCTTCCCGGCAGGCGTGATCAATGTCATCTATGGACGCGGCCGGGAAACGGTGAGCGCGCTGATGGCCAGCg                                                                                                               <  8:283774/148‑1 (MQ=255)                                    cacGGTGGTGTTCAAGCCGGCCAAGTTCGGCGTACTGCTGATCCGACCCTTGCTCGAAGCGTTCCGCGACAGCTTCCCGGCAGGCGTGATCAATGTCATCTATGGACGCGGCCGGGAAACGGTGAGCGCGCTGATGGCCAGCGGCAAgg                                                                                                         >  8:5041/1‑149 (MQ=255)                                        gtggtgTTCAAGCCGGCCAAGTTCGGCGTACTGCTGATCCGACCCTTGCTCGAAGCGTTCCGCGACAGCTTCCCGGCAGGCGTGATCAATGTCATCTATGGACGCGGCCGGGAAACGGTGAGCGCGCTGATGGCCAGCGGCAAGGTCGa                                                                                                     <  5:6299/149‑1 (MQ=255)                                               tCAAGCCGGCCAAGTTCGGCGTACTGCTGATCCGACCCTTGCTCGAAGCGTTCCGCGACAGCTTCCCGGCAGGCGTGATCAATGTCATCTATGGACGCGGCCGGGAAACGGTGAGCGCGCTGATGGCCAGCGGCAAGGTCGATGTATTc                                                                                              <  8:195671/149‑1 (MQ=255)                                                     cGGCCAAGTTCGGCGTACTGCTGATCCGACCCTTGCTCGAAGCGTTCCGCGACAGCTTCCCGGCAGGCGTGATCAATGTCATCTATGGACGCGGCCGGGAAACGGTGAGCGCGCTGATGGCCAGCGGCAAGGTCGATGTATTCGCCTTc                                                                                        <  1:29858/149‑1 (MQ=255)                                                         cAAGTTCGGCGTACTGCTGATCCGACCCTTGCTCGAAGCGTTCCGCGACAGCTTCCCGGCAGGCGTGATCAATGTCATCTATGGACGCGGCCGGGAAACGGTGAGCGCGCTGATGGCCAGCGGCAAGGTCGATGTATTCGCCTTCATCg                                                                                    >  8:194731/1‑149 (MQ=255)                                                                 gCGTACTGCTGATCCGACCCTTGCTCGAAGCGTTCCGCGACAGCTTCCCGGCAGGCGTGATCAATGTCATCTATGGACGCGGCCGGGAAACGGTGAGCGCGCTGATGGCCAGCGGCAAGGTCGATGTATTCGCCTTCATCGGCACCca                                                                             >  6:8481/1‑148 (MQ=255)                                                                   gTACTGCTGATCCGACCCTTGCTCGAAGCGTTCCGCGACAGCTTCCCGGCAGGCGTGATCAATGTCATCTATGGACGCGGCCGGGAAACGGTGAGCGCGCTGATGGCCAGCGGCAAGGTCGATGTATTCGCCTTCATCGGCACCCACaa                                                                          <  5:289641/149‑1 (MQ=255)                                                                         ctgATCCGACCCTTGCTCGAAGCGTTCCGCGACAGCTTCCCGGCAGGCGTGATCAATGTCATCTATGGACGCGGCCGGGAAACGGTGAGCGCGCTGATGGCCAGCGGCAAGGTCGATGTATTCGCCTTCATCGGCACCCACAAGgccgc                                                                    >  3:174656/1‑149 (MQ=255)                                                                            aTCCGACCCTTGCTCGAAGCGTTCCGCGACAGCTTCCCGGCAGGCGTGATCAATGTCATCTATGGACGCGGGCGGGAAACGGTGAGCGCGCTGATGGCCAGCGGCAAGGTCGATGTATTCGCCTTCATCGGCACCCACAAGGCCGCCa                                                                  <  5:35607/148‑1 (MQ=255)                                                                                   ccTTGCTCGAAGCGTTCCGCGACAGCTTCCCGGCAGGCGTGATCAATGTCATCTATGGACGCGGCCGGGAAACGGTGAGCGCGCTGATGGCCAGCGGCAAGGTCGATGTATTCGCCTTCATCGGCACCCACAAGGCCGCCAGCGACCt                                                           >  2:163135/1‑148 (MQ=255)                                                                                       gCTCGAAGCGTTCCGCGACAGCTTCCCGGCAGGCGTGATCAATGTCATCTATGGACGCGGCCGGGAAACGGTGAGCGCGCTGATGGCCAGCGGCAAGGTCGATGTATTCGCCTTCATCGGCACCCACAAGGCCGCCAGCGACCTgaa                                                        <  4:280787/147‑1 (MQ=255)                                                                                           gAAGCGTTCCGCGACAGCTTCCCGGCAGGCGTGATCAATGTCATCTATGGACGCGGCCGGGAAACGGTGAGCGCGCTGATGGCCAGCGGCAAGGTCGATGTATTCGCCTTCATCGGCACCCACAAGGCCGCCAGCGACCTGAAGAAACt                                                  <  5:298106/149‑1 (MQ=255)                                                                                                             ttCCCGGCAGGCGTGATCAATGTCATCTATGGACGCGgccgggaagctgtcgcggaacgcttcgagcaagggtcggatcagcagtacgccgaacttggccggcttgaaaaccaccttgttgaacatgatcagcgccgggatgagcgtgg                                <  8:200194‑M2/149‑113 (MQ=255)                                                                                                             ttCCCGGCAGGCGTGATCAATGTCATCTATGGACGCGGCCGGGAAACGGTGAGCGCGCTGATGGCCAGCGGCAAg                                                                                                          >  7:172230/1‑75 (MQ=255)                                                                                                             ttCCCGGCAGGCGTGATCAATGTCATCTATGGACGCGGCCGGGAAACGGTGAGCGCGCTGATGGCCAGCGGCAAg                                                                                                          <  8:172230/75‑1 (MQ=255)                                                                                                                ccGGCAGGCGTGATCAATGTCATCTATGGACGCGgccgggaagctgtcgcggaacgcttcgagcaagggtcggatcagcagtacgccgaacttggccggcttgaacaccaccgtgttgcccatgatcagcgccgggatgagcgtggtg                              <  6:186056‑M2/148‑115 (MQ=255)                                                                                                                ccGGCAGGCGTGATCAATGTCATCTATGGACGCGgccgggaagctgtcgcggaacgcttcgagcaagggtcggatcagcagtacgccgaacttg                                                                                    <  3:266300‑M2/94‑61 (MQ=255)                                                                                                                ccGGCAGGCGTGATCAATGTCATCTATGGACGCGgccgggaagctgtcgcggaacgcttcgagcaagggtcggatcagcagtacgccgaacttg                                                                                    >  4:266300‑M2/1‑34 (MQ=255)                                                                                                                ccGGCAGGCGTGATCAATGTCATCTATGGACGCGgccgggaagctgtcgcggaacgcttcgagcaagggtcggatcagcagtacgccgaactggggcggcttgaacaccgccgtgttgcccatgagcagcgccgggaggagcgtggtg                              <  2:272940‑M2/148‑115 (MQ=255)                                                                                                                ccGGCAGGCGTGATCAATGTCATCTATGGACGCGGCCGGGAAACGGTGAGCGCGCTGATGGCCAGCGGCAAGGTCGATGTATTCGCCTTCATCGGCACCCACAAGGCCGCCAGCGACCTGAAGAAACTGCACCCACGCCCGCATCGTCt                             <  1:163135/149‑1 (MQ=255)                                                                                                                 cGGCAGGCGTGATCAATGTCATCTATGGACGCGGCCGGGAAACGGTGAGCGCGCTGATGGCCAGCGGCAAGGTCGATGTATTCGCCTTCATCGGCACCCACAAGGCCGCCAGCGACCTGAAGaaa                                                    >  6:285705/1‑125 (MQ=255)                                                                                                                             tCAATGTCATCTATGGACGCGGCCGGGAAACGGTGAGCGCGCTGATGGCCAGCGGCAAGGTCGATGTATTCGCCTTCATCGGCACCCACAAGGCCGCCAGCGACCTGAAGAAACTGCACCCACGCCCGCATCGTCTGCGCGCCGCACTg                >  3:140637/1‑149 (MQ=255)                                                                                                                               aaTGTCATCTATGGACGCGGCCGGGAAACGGTGAGCGCGCTGATGGCCAGCGGCAAGGTCGATGTATTCGCCTTCATCGGCACCCACAAGGCCGCCAGCGACCTGAAGAAACTGCACCCACGCCCGCATCGTCTGCGCGCCGCACTggg              >  5:160359/1‑149 (MQ=255)                                                                                                                                   tCATCTATGGACGCGGCCGGGAAACGGTGAGCGCGCTGATGGCCAGCGGCAAGGTCGATGTATTCGCCTTCATCGGCACCCACAAGGCCGCCAGCGACCTGAAGAAACTGCACCCACGCCCGCATCGTCTGCGCGCCGCACTGGGCCTg          <  7:5041/149‑1 (MQ=255)                                                                                                                                     aTCTATGGACGCGgccgggaagctgtcgcggaacgcttcgagcaagggtcggatcagcagtacgccgaacttggccggcttgaacaccaccgtgttgcccatgatcagcgccgggatgagcgtggtgaaggtctcgttcagcgggtag         >  7:200194‑M2/1‑13 (MQ=255)                                                                                                                                     aTCTATGGACGCGGCCGGGAAACGGTGAGCGCGCTGATGGCCAGCGGCAAGGTCGATGTATTCGCCTTCATCGGCACCCACAAGGCCGCCAGCGACCTGAAGAAACTGCACCCACGCCCGCATCGTCTGCGCGCCGCACTGGGCCTGGa        <  4:174656/149‑1 (MQ=255)                                                                                                                                      tCTATGGACGCGGCCGGGAAACGGTGAGCGCGCTGATGGCCAGCGGCAAGGTCGATGTATTCGCCTTCATCGGCACCCACAAGGCCGCCAGCGACCTGAAGAAACTGCACCCACGCCCGCATCGTCTGCGCGCCGCACTGGGCCTGGAc       >  7:220158/1‑149 (MQ=255)                                                                                                                                          tGGACGCGGCCGGGAAACGGTGAGCGCGCTGATGGCCAGCGGCAAGGTCGATGTATTCGCCTTCATCGGCACCCACAAGGCCGCCAGCGACCTGAAGAAACTGCACCCACGCCCGCATCGTCCGCGCGCCGCACTGGGCCTGGAc       <  7:194731/145‑1 (MQ=255)                                                                                                                                            gACGCGGCCGGGAAACGGTGAGCGCGCTGATGGCCAGCGGCAAGGTCGATGTATTCGCCTTCATCGGCACCCACAAGGCCGCCAGCGACCTGAAGAAACTGCACCCACGCCCGCATCGTCTGCGCGCCGCACTGGGCCTGGACGCCaa  <  4:140637/148‑1 (MQ=255)                                                                                                                                                 |                                                                                                                                               TTCACCACGCTCATCCCGGCGCTGATCATGGGCAACACGGTGGTGTTCAAGCCGGCCAAGTTCGGCGTACTGCTGATCCGACCCTTGCTCGAAGCGTTCCGCGACAGCTTCCCGGCAGGCGTGATCAATGTCATCTATGGACGCGGCCGGGAAACGGTGAGCGCGCTGATGGCCAGCGGCAAGGTCGATGTATTCGCCTTCATCGGCACCCACAAGGCCGCCAGCGACCTGAAGAAACTGCACCCACGCCCGCATCGTCTGCGCGCCGCACTGGGCCTGGACGCCAA  >  NC_002947/3900169‑3900455

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.