New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 392161234 (0.690)4 (0.090) 4/246 NT 10.3% coding (154/1689 nt) acs acyl‑CoA synthetase
?NC_002947 = 3921702 38 (0.830)coding (64/1689 nt) acs acyl‑CoA synthetase

CCGGGTTGATGTTGACCAGGATCGCGCCAACCTTGGCGCTGGCGAACTGGGTAATGCACCACTCGGCGCAGTTGGGTGCCCAGATGCCAAGACGGTCACCGGGCTGCACGCCCAGGGCCATCAGCGCGCGGGCGTGCTGGTCGACGGCATCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3921459‑3921612
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcatcggcGACGCCTTCGACGCCACCGTAGCCCGCTTCCCCGACCGTGAGGCGCTGGTGGTTCACCATCAGGCCCTGCGCTACACGTGGCGGCAACTGGCCGATGCCGTCGACCAGCACGCCCGCGCGCTGATGGCCCTGGGCGTGCAGCCCG  <  NC_002947/3921702‑3921558
                                                                                                                                                                                                                                                                                                           
CCGGGTTGATGTTGACCAGGATCGCGCCAACCTTGGCGCTGGCGAACTGGGTAATGCACCACTCGGCGCAGTTGGGTGCCCAGATGCCAAGACGGTCACCGGGCTGCACGCCCAGGGCCATCAGCGCGCGGGCGTGCTGGTCGACGGCA                                                                                                                                                        <  2:114261/149‑1
 CGGGTTGATGTTGACCAGGATCGCGCCAACCTTGGCGCTGGCGAACTGGGTAATGCACCACTCGGCGCAGTTGGGTGCCCAGATGCCAAGACGGTCACCGGGCTGCACGCCCAGGGCCATCAGCGCGCGGGCGTGCTGGTCGACGGCAT                                                                                                                                                       <  4:143484/149‑1
 CGGGTTGATGTTGACCAGGATCGCGCCAACCTTGGCGCTGGCGAACTGGGTAATGCACCACTCGGCGCAGTTGGGTGCCCAGATGCCAAGACGGTCACCGGGCTGCACGCCCAGGGCCATCAGCGCGCGGGCGTGCTGGTCGACGGCAT                                                                                                                                                       <  4:148119/149‑1
 CGGGTTGATGTTGACCAGGATCGCGCCAACCTTGGCGCTGGCGAACTGGGTAATGCACCACTCGGCGCAGTTGGGTGCCCAGATGCCAAGACGGTCACCGGGCTGCACGCCCAGGGCCATCAGCGCGCGGGCGTGCTGGTCGACGGCAT                                                                                                                                                       >  4:234368/1‑149
                                                                                                   CGGGCTGCACGCCCAGGGCCATCAGCGCGCGGGCGTGCTGGTCGACGGCATCGGCGACGCCTTCGACGCCACCGTAGCCCGCTTCCCCGACCGTG                                                                                                           <  7:35842/95‑1
                                                                                                   CGGGCTGCACGCCCAGGGCCATCAGCGCGCGGGCGTGCTGGTCGACGGCATCGGCGACGCCTTCGACGCCACCGTAGCCCGCTTCCCCGACCGTG                                                                                                           >  8:35842/1‑95
                                                                                                     GGCTGCACGCCCAGGGCCATCAGCGCGCGGGCGTGCTGGTCGACGGCATCGGCGACGCCTTCGACGCCACCGTAGCCCGCTTCCCCGACCGTGAGGCGCTGGTGGTTCACCATCAGGCCCTGCGCTACACGTGGCGGCAACTGGCCGAT                                                   >  7:284643/1‑149
                                                                                                           ACGCCCAGGGCCATCAGCGCGCGGGCGTGCTGGTCGACGGCATCGGCGACGCCTTCGACGCCACCGTAGCCCGCTTCCCCGACCGTGAGGCGCTGGTGGTTCACCATCAGGCCCTGCGCTACACGTGGCGGCAACTGGCCGATGCCGTC                                             <  8:284643/149‑1
                                                                                                                                                  GCATCGGCGACGCCTTCGACGCCACCGTAGCCCGCTTCCCCGACCGTGAGGCGCTGGTGGTTCACCATCAGGCCCTGCGCTACACGTGGCGGCAACTGGCCGATGCCGTCGACCAGCACGCCCGCGCGCTGATGGCCCTGGGCGTGCAG      >  3:234368/1‑149
                                                                                                                                                       GGCGACTCCTTCGACGCCACCGTAGCCCGCTTCCCCGACCGTGAGGCGCTGGTGGTTCACCATCAGGCCCTGCGCTACACGTGGCGGCAACTGGCCGATGCCGTCGACCAGCACGCCCGCGCGCTGATGGCCCTGGGCGTGCAGCCCG  <  4:13496/148‑1
                                                                                                                                                       GGCGACGCCTTCGACGCCACCGTAGCCCGCTTCCCCGACCGTGAGGCGCTGGTGGTTCACCATCAGGCCCTGCGCTACACGTGGCGGCAACTGGCCGATGCCGTCGACCAGCACGCCCGCGCGCTGATGGCCCTGGGCGTGCAGCCCG  <  2:99367/148‑1
                                                                                                                                                                                                                                                                                                           
CCGGGTTGATGTTGACCAGGATCGCGCCAACCTTGGCGCTGGCGAACTGGGTAATGCACCACTCGGCGCAGTTGGGTGCCCAGATGCCAAGACGGTCACCGGGCTGCACGCCCAGGGCCATCAGCGCGCGGGCGTGCTGGTCGACGGCATCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3921459‑3921612
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcatcggcGACGCCTTCGACGCCACCGTAGCCCGCTTCCCCGACCGTGAGGCGCTGGTGGTTCACCATCAGGCCCTGCGCTACACGTGGCGGCAACTGGCCGATGCCGTCGACCAGCACGCCCGCGCGCTGATGGCCCTGGGCGTGCAGCCCG  <  NC_002947/3921702‑3921558

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.