| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4055975 = | 37 (0.760) | 4 (0.090) | 3/248 | NT | 9.4% | coding (1687/2406 nt) | PP_3575 | ferric siderophore receptor |
| ? | NC_002947 | 4056014 = | 42 (0.910) | coding (1648/2406 nt) | PP_3575 | ferric siderophore receptor | |||||
ATCAAAGGCGATACCGGCTATGACGAAGAAAAGGTCTCGCCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4056017‑4055975‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgccttTGATGCCGTCGCTCCAGTCATCCACCTGCACCCGTTGCCAGCGCGCACCCAGAGTCAACAGCAGGCGGTCGTCAAAAAAGCCAAGGGTATCGGCCAGGGCCACGCCG > NC_002947/4056014‑4056120 ATCAAAGGCGATACCGGCTATGACGAAGAAAAGGTCTCGCCTTTGATGCCGTCGCTCCAGTCATCCACCTGCACCCGTTGCCAGCGCGCACCCAGAGTCAACAGCAGGCGGTCGTCAAAAAAGCCAAGGGTATCGGCCAGGGCCACGCC > 3:161234/1‑149ATCAAAGGCGATACCGGCTATGACGAAGAAAAGGTCTCGCCTTTGATGCCGTCGCTCCAGTCATCCACCTGCACCCGTTGCCAGCGCGCACCCAGAGTCAACAGCAGGCGGTCGTCAAAAAAGCCAAGGGTATCGGCCA > 5:177233/1‑139ATCAAAGGCGATACCGGCTATGACGAAGAAAAGGTCTCGCCTTTGATGCCGTCGCTCCAGTCATCCACCTGCACCCGTTGCCAGCGCGCACCCAGAGTCAACAGCAGGCGGTCGTCAAAAAAGCCAAGGGTATCGGCCA < 6:177233/139‑1 CAAAGGCGATACCGGCTATGACGAAGAAAAGGTCTCGCCTTTGATGCCGTCGCTCCAGTCATCCACCTGCACCCGTTGCCAGCGCGCACCCAGAGTCAACAGCAGGCGGTCGTCAAAAAAGCCAAGGGTATCGGCCAGGGCCACGCCG > 7:59577/1‑148 ATCAAAGGCGATACCGGCTATGACGAAGAAAAGGTCTCGCCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4056017‑4055975‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgccttTGATGCCGTCGCTCCAGTCATCCACCTGCACCCGTTGCCAGCGCGCACCCAGAGTCAACAGCAGGCGGTCGTCAAAAAAGCCAAGGGTATCGGCCAGGGCCACGCCG > NC_002947/4056014‑4056120 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |