New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 4055975 = | 37 (0.760) | 4 (0.090) | 3/248 | NT | 9.4% | coding (1687/2406 nt) | PP_3575 | ferric siderophore receptor |
? | NC_002947 | 4056014 = | 42 (0.910) | coding (1648/2406 nt) | PP_3575 | ferric siderophore receptor |
ATCAAAGGCGATACCGGCTATGACGAAGAAAAGGTCTCGCCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4056017‑4055975 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgccttTGATGCCGTCGCTCCAGTCATCCACCTGCACCCGTTGCCAGCGCGCACCCAGAGTCAACAGCAGGCGGTCGTCAAAAAAGCCAAGGGTATCGGCCAGGGCCACGCCG > NC_002947/4056014‑4056120 ATCAAAGGCGATACCGGCTATGACGAAGAAAAGGTCTCGCCTTTGATGCCGTCGCTCCAGTCATCCACCTGCACCCGTTGCCAGCGCGCACCCAGAGTCAACAGCAGGCGGTCGTCAAAAAAGCCAAGGGTATCGGCCAGGGCCACGCC > 3:161234/1‑149 ATCAAAGGCGATACCGGCTATGACGAAGAAAAGGTCTCGCCTTTGATGCCGTCGCTCCAGTCATCCACCTGCACCCGTTGCCAGCGCGCACCCAGAGTCAACAGCAGGCGGTCGTCAAAAAAGCCAAGGGTATCGGCCA > 5:177233/1‑139 ATCAAAGGCGATACCGGCTATGACGAAGAAAAGGTCTCGCCTTTGATGCCGTCGCTCCAGTCATCCACCTGCACCCGTTGCCAGCGCGCACCCAGAGTCAACAGCAGGCGGTCGTCAAAAAAGCCAAGGGTATCGGCCA < 6:177233/139‑1 CAAAGGCGATACCGGCTATGACGAAGAAAAGGTCTCGCCTTTGATGCCGTCGCTCCAGTCATCCACCTGCACCCGTTGCCAGCGCGCACCCAGAGTCAACAGCAGGCGGTCGTCAAAAAAGCCAAGGGTATCGGCCAGGGCCACGCCG > 7:59577/1‑148 ATCAAAGGCGATACCGGCTATGACGAAGAAAAGGTCTCGCCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4056017‑4055975 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgccttTGATGCCGTCGCTCCAGTCATCCACCTGCACCCGTTGCCAGCGCGCACCCAGAGTCAACAGCAGGCGGTCGTCAAAAAAGCCAAGGGTATCGGCCAGGGCCACGCCG > NC_002947/4056014‑4056120 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |