New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 4055975 =37 (0.760)4 (0.090) 3/248 NT 9.4% coding (1687/2406 nt) PP_3575 ferric siderophore receptor
?NC_002947 4056014 = 42 (0.910)coding (1648/2406 nt) PP_3575 ferric siderophore receptor

ATCAAAGGCGATACCGGCTATGACGAAGAAAAGGTCTCGCCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4056017‑4055975
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgccttTGATGCCGTCGCTCCAGTCATCCACCTGCACCCGTTGCCAGCGCGCACCCAGAGTCAACAGCAGGCGGTCGTCAAAAAAGCCAAGGGTATCGGCCAGGGCCACGCCG  >  NC_002947/4056014‑4056120
                                                                                                                                                      
ATCAAAGGCGATACCGGCTATGACGAAGAAAAGGTCTCGCCTTTGATGCCGTCGCTCCAGTCATCCACCTGCACCCGTTGCCAGCGCGCACCCAGAGTCAACAGCAGGCGGTCGTCAAAAAAGCCAAGGGTATCGGCCAGGGCCACGCC   >  3:161234/1‑149
ATCAAAGGCGATACCGGCTATGACGAAGAAAAGGTCTCGCCTTTGATGCCGTCGCTCCAGTCATCCACCTGCACCCGTTGCCAGCGCGCACCCAGAGTCAACAGCAGGCGGTCGTCAAAAAAGCCAAGGGTATCGGCCA             >  5:177233/1‑139
ATCAAAGGCGATACCGGCTATGACGAAGAAAAGGTCTCGCCTTTGATGCCGTCGCTCCAGTCATCCACCTGCACCCGTTGCCAGCGCGCACCCAGAGTCAACAGCAGGCGGTCGTCAAAAAAGCCAAGGGTATCGGCCA             <  6:177233/139‑1
  CAAAGGCGATACCGGCTATGACGAAGAAAAGGTCTCGCCTTTGATGCCGTCGCTCCAGTCATCCACCTGCACCCGTTGCCAGCGCGCACCCAGAGTCAACAGCAGGCGGTCGTCAAAAAAGCCAAGGGTATCGGCCAGGGCCACGCCG  >  7:59577/1‑148
                                                                                                                                                      
ATCAAAGGCGATACCGGCTATGACGAAGAAAAGGTCTCGCCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4056017‑4055975
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgccttTGATGCCGTCGCTCCAGTCATCCACCTGCACCCGTTGCCAGCGCGCACCCAGAGTCAACAGCAGGCGGTCGTCAAAAAAGCCAAGGGTATCGGCCAGGGCCACGCCG  >  NC_002947/4056014‑4056120

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.