New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4059281	38 (0.780)	4 (0.090)	4/240	NT	9.5%	coding (1618/1638 nt)	pgm	phosphoglucomutase
	?	NC_002947	= 4059323	41 (0.920)					coding (1576/1638 nt)	pgm	phosphoglucomutase

CCCGGTACAGGGCAGGCAGGCCAGGCTCCGGTGGCGGCGCGGCGTCGATCATGAGGAGGGTCCTGCGGCGGAGTAAATAAGATTAATTCTAATTTACATCACACCACAGAACCAAGCGGTTTGTTACCGGTCAGGCAATGGCTTCATCGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4059131‑4059281 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcttcatcgacGAGGCGCATTTGCAGCGTCTGGTGGAGGAAGCACAAGTGCTGGTCGATGAAGCCATTGCCTGACCGGTAACAAACCGCTTGGTTCTGTGGTGTGATGTAAATTAGAATTAATCTTATTTACTCCGCCGCAGGACCCTCCTCATG  <  NC_002947/4059323‑4059180                                                                                                                                                                                                                                                                                                         CCCGGTACAGGGCAGGCAGGCCAGGCTCCGGTGGCGGCGCGGCGTCGATCATGAGGAGGGTCCTGCGGCGGAGTAAATAAGATTAATTCTAATTTACATCACACCACAGAACCAAGCGGTTTGTTACCGGTCAGGCAATGGCTTCATC                                                                                                                                                     >  7:290990/1‑148  CCGGTACAGGGCAGGCAGGCCAGGCTCCGGTGGCGGCGCGGCGTCGATCATGAGGAGGGTCCTGCGGCGGAGTAAATAAGATTAATTCTAATTTACATCACACCACAGAACCAAGCGGTTTGTTACCGGTCAGGCAATGGCTTCATC                                                                                                                                                     <  6:229350/147‑1   CGGTACAGGGCAGGCAGGCCAGGCTCCGGTGGCGGCGCGGCGTCGATCATGAGGAGGGTCCTGCGGCGGAGTAAATAAGATTAATTCTAATTTACATCACACCACAGAACCAAGCGGTTTGTTACCGGTCAGGCAATGGCTTCATCGAC                                                                                                                                                  <  6:249481/149‑1   CGGTACAGGGCAGGCAGGCCAGGCTCCGGTGGCGGCGCGGCGTCGATCATGAGGAGGGTCCTGCGGCGGAGTAAATAAGATTAATTCTAATTTACATCACACCACAGAACCAAGCGGTTTGTTACCGGTCAGGCAATGGCTTCATCGAC                                                                                                                                                  <  8:72286/149‑1                                                             TCCTGCGGCGGAGTAAATAAGATTAATTCTAATTTACATCACACCACAGAACCAAGCGGTTTGTTACCGGTCAGGCAATGGCTTCATCGACGAGGCGCATTTGCAGCGTCTGGTGGAGGAAGCACAAGTGCTGGTCGATGAAGC                                                                                             <  7:136251/144‑1                                                             TCCTGCGGCGGAGTAAATAAGATTAATTCTAATTTACATCACACCACAGAACCAAGCGGTTTGTTACCGGTCAGGCAATGGCTTCATCGACGAGGCGCATTTGCAGCGTCTGGTGGAGGAAGCACAAGTGCTGGTCGATGAAGC                                                                                             >  8:136251/1‑144                                                                                                   TCACACCACAGAACCAAGCGGTTTGTTACCGGTCAGGCAATGGCTTCATCGACGAGGCGCATTTGCAGCGTCTGGTGGAGGAAGCACAAGTGCTGGTCGATGAAG                                                                                              >  5:16899/1‑105                                                                                                   TCACACCACAGAACCAAGCGGTTTGTTACCGGTCAGGCAATGGCTTCATCGACGAGGCGCATTTGCAGCGTCTGGTGGAGGAAGCACAAGTGCTGGTCGATGAAG                                                                                              <  6:16899/105‑1                                                                                                                                                 CATCGACGAGGCGCATTTGCAGCGTCTGGTGGAGGAAGCACAAGTGCTGGTCGATGAAGCCATTGCCTGACCGGTAACAAACCGCTTGGTTCTGTGGTGTGATGTAAATTAGAATTAATCTTATTTACTCCGCCGCAGGACCCTCCTC     <  6:9978/148‑1                                                                                                                                                   TCGACGAGGCGCATTTGCAGCGTCTGGTGGAGGAAGCACAAGTGCTGGTCGATGAAGCCATTGCCTGACCGGTAACAAACCGCTTGGTTCTGTGGTGTGATGTAAATTAGAATTAATCTTATTTACTCCGCCGCAGGACCCTCCTCATG  <  4:145809/149‑1                                                                                                                                                   TCGACGAGGCGCATTTGCAGCGTCTGGTGGAGGAAGCACAAGTGCTGGTCGATGAAGCCATTGCCTGACCGGTAACAAACCGCTTGGTTCTGTGGTGTGATGTAAATTAGAATTAATCTTATTTACTCCGCCGCAGGACCCTCCTCAT   >  5:86701/1‑148                                                                                                                                                    CGACGAGGCGCATTTGCAGCGTCTGGTGGAGGAAGCACAAGTGCTGGTCGATGAAGCCATTGCCTGACCGGTAACAAACCGCTTGGTTCTGTGGTGTGATGTAAATTAGAATTAATC                                 <  1:208056/117‑1                                                                                                                                                    CGACGAGGCGCATTTGCAGCGTCTGGTGGAGGAAGCACAAGTGCTGGTCGATGAAGCCATTGCCTGACCGGTAACAAACCGCTTGGTTCTGTGGTGTGATGTAAATTAGAATTAATC                                 >  2:208056/1‑117                                                                                                                                                      ACGAGGCGCATTTGCAGCGTCTGGTGGAGGAAGCACAAGTGCTGGTCGATGAAGCCATTGCCTGACCGGTAACAAACCGCTTGGTTCTGTGGTGTGATGTAAATTAGAATTAATCTTATTTACTCCGCCGCAGGACCCTCCTC     <  7:179955/143‑1                                                                                                                                                      ACGAGGCGCATTTGCAGCGTCTGGTGGAGGAAGCACAAGTGCTGGTCGATGAAGCCATTGCCTGACCGGTAACAAACCGCTTGGTTCTGTGGTGTGATGTAAATTAGAATTAATCTTATTTACTCCGCCGCAGGACCCTCCTC     >  8:179955/1‑143                                                                                                                                                                                                                                                                                                         CCCGGTACAGGGCAGGCAGGCCAGGCTCCGGTGGCGGCGCGGCGTCGATCATGAGGAGGGTCCTGCGGCGGAGTAAATAAGATTAATTCTAATTTACATCACACCACAGAACCAAGCGGTTTGTTACCGGTCAGGCAATGGCTTCATCGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4059131‑4059281 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcttcatcgacGAGGCGCATTTGCAGCGTCTGGTGGAGGAAGCACAAGTGCTGGTCGATGAAGCCATTGCCTGACCGGTAACAAACCGCTTGGTTCTGTGGTGTGATGTAAATTAGAATTAATCTTATTTACTCCGCCGCAGGACCCTCCTCATG  <  NC_002947/4059323‑4059180

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.