| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4059281 | 38 (0.780) | 4 (0.090) | 4/240 | NT | 9.5% | coding (1618/1638 nt) | pgm | phosphoglucomutase |
| ? | NC_002947 | = 4059323 | 41 (0.920) | coding (1576/1638 nt) | pgm | phosphoglucomutase | |||||
CGGTACAGGGCAGGCAGGCCAGGCTCCGGTGGCGGCGCGGCGTCGATCATGAGGAGGGTCCTGCGGCGGAGTAAATAAGATTAATTCTAATTTACATCACACCACAGAACCAAGCGGTTTGTTACCGGTCAGGCAATGGCTTCATCGACCAGCACTTGTGCTTCCTCCACCAGACGCTGCAAATGCGCCTCGTCGATGAAGCTTTCGGCGTAGATCTTGTAGATGTCTTCAGTACCCGACGGGCGCGCGGCGAACCAGCCATTGGCCGTCATCACCTTAAGCCCGCCAATCGCCT > NC_002947/4059133‑4059427 | cGGTACAGGGCAGGCAGGCCAGGCTCCGGTGGCGGCGCGGCGTCGATCATGAGGAGGGTCCTGCGGCGGAGTAAATAAGATTAATTCTAATTTACATCACACCACAGAACCAAGCGGTTTGTTACCGGTCAGGCAATGGCTTCATCGAC < 8:72286‑M1/149‑1 (MQ=255)cGGTACAGGGCAGGCAGGCCAGGCTCCGGTGGCGGCGCGGCGTCGATCATGAGGAGGGTCCTGCGGCGGAGTAAATAAGATTAATTCTAATTTACATCACACCACAGAACCAAGCGGTTTGTTACCGGTCAGGCAATGGCTTCATCGAC < 6:249481‑M1/149‑1 (MQ=255) gcaggcCAGGCTCCGGTGGCGGCGCGGCGTCGATCATGAGGAGGGTCCTGCGGCGGAGTAAATAAGATTAATTCTAATTTACATCACACCACAGAACCAAGCGGTTTGTTACCGGTCAGGCAATGGCTTCATCGACCAGCACTTGTGCt < 5:142046/149‑1 (MQ=255) gccaggcTCCGGTGGCGGCGCGGCGTCGATCATGAGGAGGGTCCTGCGGCGGAGTAAATAAGATTAATTCTAATTTACATCACACCACAGAACCAAGCGGTTTGTTACCGGTCAGGCAATGGCTTCATCGACCAGCACTTGTGCTtcct > 3:54853/1‑149 (MQ=255) gccaggcTCCGGTGGCGGCGCGGCGTCGATCATGAGGAGGGTCCTGCGGCGGAGTAAATAAGATTAATTCTAATTTACATCACACCACAGAACCAAGCGGTTTGTTACCGGTCAGGCAATGGCTTCATCGACCAGCACTTGTGCTtcct > 4:72037/1‑149 (MQ=255) ccaggcTCCGGTGGCGGCGCGGCGTCGATCATGAGGAGGGTCCTGCGGCGGAGTAAATAAGATTAATTCTAATTTACATCACACCACAGAACCAAGCGGTTTGTTACCGGTCAGGCAATGGCTTCATCGACCAGCACTTGTGCTtcctc > 8:12686/1‑149 (MQ=255) caggcTCCGGTGGCGGCGCGGCGTCGATCATGAGGAGGGTCCTGCGGCGGAGTAAATAAGATTAATTCTAATTTACATCACACCACAGAACCAAGCGGTTTGTTACCGGTCAGGCAATGGCTTCATCGACCAGCACTTGTGCTtcctc > 1:126102/1‑148 (MQ=255) tCCGGTGGCGGCGCGGCGTCGATCATGAGGAGGGTCCTGCGGCGGAGTAAATAAGATTAATTCTAATTTACATCACACCACAGAACCAAGCGGTTTGTTACCGGTCAGGCAATGGCTTCATCGACCAGCACTTGTGCTTCCTccac > 8:233200/1‑146 (MQ=255) ggcgcggcgTCGATCATGAGGAGGGTCCTGCGGCGGAGTAAATAAGATTAATTCTAATTTACATCACACCACAGAACCAAGCGGTTTGTTACCGGTCAGGCAATGGCTTCATCGACCAGCACTTGTGCTTCCTCCACCAGACGCTGCaa < 7:12686/149‑1 (MQ=255) gcggcgTCGATCATGAGGAGGGTCCTGCGGCGGAGTAAATAAGATTAATTCTAATTTACATCACACCACAGAACCAAGCGGTTTGTTACCGGTCAGGCAATGGCTTCATCGACCAGCACTTGTGCTTCCTCCACCAGACGCTGCAAATg < 7:14215/149‑1 (MQ=255) ggctTCTATCATTATGAGTGTCCTGCGGCGGAGTAAATAAGATTAATTCTAATTTACATCAAACCACAGAACCAACCGGTTAGTTACCTGTCAGCCAATCGCTTCATCGACCAGCACTTGTGCTTCCTCCACCACACGCCCCAAATg < 5:74168/147‑1 (MQ=255) gTCGATCATGAGGAGGGTCCTGCGGCGGAGTAAATAAGATTAATTCTAATTTACATCACACCACAGAACCAAGCGGTTTGTTACCGGTCAGGCAATGGCTTCATCGACCAGCACTTGTGCTTCCTCCACCAGACGCTGCAAATGCGCCt > 8:20062/1‑149 (MQ=255) gATCATGAGGAGGGTCCTGCGGCGGAGTAAATAAGATTAATTCTAATTTACATCACACCACAGAACCAAGCGGTTTGTTACCGGTCAGGCAATGGCTTCATCGACCAGCACTTGTGCTTCCTcca > 8:115178/1‑125 (MQ=255) gATCATGAGGAGGGTCCTGCGGCGGAGTAAATAAGATTAATTCTAATTTACATCACACCACAGAACCAAGCGGTTTGTTACCGGTCAGGCAATGGCTTCATCGACCAGCACTTGTGCTTCCTcca < 7:115178/125‑1 (MQ=255) cATGAGGAGGGTCCTGCGGCGGAGTAAATAAGATTAATTCTAATTTACATCACACCACAGAACCAAGCGGTTTGTTACCGGTCAGGCAATGGCTTCATCGACCAGCACTTGTGCTTCCTCCACCAGACGCTGCAAATGCGCCTCgtcga < 4:145809‑M2/149‑6 (MQ=255) aTGAGGAGGGTCCTGCGGCGGAGTAAATAAGATTAATTCTAATTTACATCACACCACAGAACCAAGCGGTTTGTTACCGGTCAGGCAATGGCTTCATCGACCAGCACTTGTGCTTCCTCCACCAGACGCTGCAAATGCGCCTCgtcga > 5:86701‑M2/1‑143 (MQ=255) gaggagGGTCCTGCGGCGGAGTAAATAAGATTAATTCTAATTTACATCACACCACAGAACCAAGCGGTTTGTTACCGGTCAGGCAATGGCTTCATCGACCAGCACTTGTGCTTCCTCCACCAGACGCTGCAAAt < 5:210903/134‑1 (MQ=255) gaggagGGTCCTGCGGCGGAGTAAATAAGATTAATTCTAATTTACATCACACCACAGAACCAAGCGGTTTGTTACCGGTCAGGCAATGGCTTCATCGACCAGCACTTGTGCTTCCTCCACCAGACGCTGCAAAt > 6:210903/1‑134 (MQ=255) gaggagGGTCCTGCGGCGGAGTAAATAAGATTAATTCTAATTTACATCACACCACAGAACCAAGCGGTTTGTTACCGGTCAGGCAATGGCTTCATCGACCAGCACTTGTGCTTCCTCCACCAGACGCTGCAAATGCGCCTCgtcgatg < 6:9978‑M2/148‑8 (MQ=255) gaggagGGTCCTGCGGCGGAGTAAATAAGATTAATTCTAATTTACATCACACCACAGAACCAAGCGGTTTGTTACCGGTCAGGCAATGGCTTCATCGACCAGCACTTGTGCTTCCTCCACCAGACGCTGCAAATGCGCCTCgt > 8:179955‑M2/1‑141 (MQ=255) gaggagGGTCCTGCGGCGGAGTAAATAAGATTAATTCTAATTTACATCACACCACAGAACCAAGCGGTTTGTTACCGGTCAGGCAATGGCTTCATCGACCAGCACTTGTGCTTCCTCCACCAGACGCTGCAAATGCGCCTCgt < 7:179955‑M2/143‑3 (MQ=255) ggTCCTGCGGCGGAGTAAATAAGATTAATTCTAATTTACATCACACCACAGAACCAAGCGGTTTGTTACCGGTCAGGCATTGGCTTCATCGACCAGCACTTGTGCTTCCTCCACCAGACGCTGCAAATGCGCCTCGTCGATGAAGCtt > 4:280236/1‑148 (MQ=255) tCCTGCGGCGGAGTAAATAAGATTAATTCTAATTTACATCACACCACAGAACCAAGCGGTTTGTTACCGGTCAGGCAATGGCTTCATCGACgaggcgcatttgcagcgtctggtggaggaagcacaagtgctggtcgatgaagc > 8:136251‑M1/1‑91 (MQ=255) tCCTGCGGCGGAGTAAATAAGATTAATTCTAATTTACATCACACCACAGAACCAAGCGGTTTGTTACCGGTCAGGCAATGGCTTCATCGACgaggcgcatttgcagcgtctggtggaggaagcacaagtgctggtcgatgaagc < 7:136251‑M1/144‑54 (MQ=255) tGCGGCGGAGTAAATAAGATTAATTCTAATTTACATCACACCACAGAACCAAGCGGTTTGTTACCGGTCAGGCAATGGCTTCATCGACCAGCACTtgt < 3:183618/98‑1 (MQ=255) tGCGGCGGAGTAAATAAGATTAATTCTAATTTACATCACACCACAGAACCAAGCGGTTTGTTACCGGTCAGGCAATGGCTTCATCGACCAGCACTtgt > 4:183618/1‑98 (MQ=255) ggAGTAAATAAGATTAATTCTAATTTACATCACACCACAGAACCAAGCGGTTTGTTACCGGTCAGGCAATGGCTTCATCGACCAGCACTTGTGCTTCCTCCACCAGACGCTGCAAATGCGCCTCGTCGATGAAGCTTTCGGCGTAGATc < 3:145809/149‑1 (MQ=255) gTAAATAAGATTAATTCTAATTTACATCACACCACAGAACCAAGCGGTTTGTTACCGGTCAGGCATTGGCTTCATCGACCAGCACTTGTGCTTCCTCCACCAGACGCTGCAAATGCGCCTCGTCGATGAAGCTTTCGGCGTAGATCTTg < 3:280236/149‑1 (MQ=255) aaTAAGATTAATTCTAATTTACATCACACCACAGAACCAAGCGGTTTGTTACCGGTCAGGCAATGGCTTCATCGACCAGCACTTGTGCTTCCTCCACCAGACGCTGCAAATGCGCCTCGTCGATGAAGCTTTCGGCGTAGATCTTg > 6:17474/1‑146 (MQ=255) aaTAAGATTAATTCTAATTTACATCACACCACAGAACCAAGCGGTTTGTTACCGGTCAGGCAATGGCTTCATCGACCAGCACTTGTGCTTCCTCCACCAGACGCTGCAAATGCGCCTCGTCGATGAAGCTTTCGGCGTAGATCTTGTAg < 7:233200/149‑1 (MQ=255) aTAAGATTAATTCTAATTTACATCACACCACAGAACCAAGCGGTTTGTTACCGGTCAGGCAATGGCTTCATCGACCAGCACTTGTGCTTCCTCCACCAGACGCTGCAAATGCGCCTCGTCGATGAAGCTTTCGGCGTAGATCTTGTAGa < 8:290990/149‑1 (MQ=255) tAAGATTAATTCTAATTTACATCACACCACAGAACCAAGCGGTTTGTTACCGGTCAGGCAATGGCTTCATCGACCAGCACTTGTGCTTCCTCCACCAGACGCTGCAAATGCGCCTCGTCGATGAAGCTTTCGGCGTAGATCTTGTAGAt < 2:126102/149‑1 (MQ=255) gATTAATTCTAATTTACATCACACCACAGAACCAAGCGGTTTGTTACCGGTCAGGCAATGGCTTCATCGACCAGCACTTGTGCTTCCTCCACCAGACGCTGCAAATGCGCCTCgtcg > 2:208056‑M2/1‑113 (MQ=255) gATTAATTCTAATTTACATCACACCACAGAACCAAGCGGTTTGTTACCGGTCAGGCAATGGCTTCATCGACCAGCACTTGTGCTTCCTCCACCAGACGCTGCAAATGCGCCTCgtcg < 1:208056‑M2/117‑5 (MQ=255) aTTAATTCTAATTTACATCACACCACAGAACCAAGCGGATTGTTACCGGTCAGGCAATGGCTTCATCGACCAGCACATGTGCTTCCTCCACCAGACGCTGCAAATGCGCCTCGTCGATGAAGCTTTCGGCGTAGATCTTGTAGATGTCt > 2:42256/1‑149 (MQ=255) ttCTAATTTACATCACACCACAGAACCAAGCGGTTTGTTACCGGTCAGGCAATGGCTTCATCGACCAGCACTTGTGCTTCCTCCACCAGACGCTGCAAATGCGCCTCGTCGATGAAGCTTTCGGCGTAGATCTTGTAGATGTCTTCAg > 4:251175/1‑148 (MQ=255) ttCTAATTTACATCACACCACAGAACCAAGCGGTTTGTTACCGGTCAGGCAATGGCTTCATCGACCAGCACTTGTGCTTCCTCCACCAGACGCTGCAAATGCGCCTCGTCGATGAAGCTTTCGGCGTAGATCTTGTAGATGTCTTCAGt < 5:17474/149‑1 (MQ=255) aTTTACATCACACCACAGAACCAAGCGGTTTGTTACCGGTCAGGCAATGGCTTCATCGACCAGCACTTGTGCTTCCTCCACCAGACGCTGCAAATGCGCCTCGTCGATGAAGCTTTCGGCGTAGATCTTGTAGATGTCTTCAGTAccc > 4:296278/1‑148 (MQ=255) aTTTACATCACACCACAGAACCAAGCGGTTTGTTACCGGTCAGGCAATGGCTTCATCGACCAGCACTTGTGCTTCCTCCACCAGACGCTGCAAATGCGCCTCGTCGATGAAGCTTTCGGCGTAGATCTTGTAGATGTCTTCAGTACCCg > 4:291662/1‑149 (MQ=255) aTCACACCACAGAACCAAGCGGTTTGTTACCGGTCAGGCAATGGCTTCATCGACCAGCACTTGTGCTTCCTCCACCAGACGCTGCAAATGCGCCTCGTCGATGAAGCTTTCGGCGTAGATCTTGTAGATGTCTTCAGTACCCGACGGgc < 5:9978/149‑1 (MQ=255) tCACACCACAGAACCAAGCGGTTTGTTACCGGTCAGGCAATGGCTTCATCGACgaggcgcatttgcagcgtctggtggaggaagcacaagtgctggtcgatgaag < 6:16899‑M1/105‑53 (MQ=255) tCACACCACAGAACCAAGCGGTTTGTTACCGGTCAGGCAATGGCTTCATCGACgaggcgcatttgcagcgtctggtggaggaagcacaagtgctggtcgatgaag > 5:16899‑M1/1‑53 (MQ=255) tCACACCACAGAACCAAGCGGTTTGTTACCGGTCAGGCAATGGCTTCATCGACCAGCACTTGTGCTTCCTCCACCAGACGCTGCAAATGCGCCTCGTCGATGAAGCTTTCGGCGTAGATCTTGTAGATGTCTTCAGTACCCGACGGgcg > 3:96657/1‑149 (MQ=255) cAAGCGGTTTGTTACCGGTCAGGCAATGGCTGCATCGACCAGCACTTGTGCTTCCTCCACCAGACGCTGCAAATGCGCCTCGTCGATGACGCGTTCGGCGTAGATCTTGTAGCTGTCGTCAGTACCCGCCGGGCGCGCGGCGCACCacc > 6:261177/1‑147 (MQ=255) gTTTGTTACCGGTCAGGCAATGGCTTCATCGACCAGCACTTGTGCTTCCTCCACCAGACGCTGCAAATGCGCCTCGTCGATGAAGCTTTCGGCGTAGATCTTGTAGATGTCtt > 2:98313/1‑113 (MQ=255) gTTTGTTACCGGTCAGGCAATGGCTTCATCGACCAGCACTTGTGCTTCCTCCACCAGACGCTGCAAATGCGCCTCGTCGATGAAGCTTTCGGCGTAGATCTTGTAGATGTCTTCAGTACCCGACGGGCGCGCGGCGAACCAGCCATTgg < 3:72037/149‑1 (MQ=255) gTTTGTTACCGGTCAGGCAATGGCTTCATCGACCACCACTTGTGCTTCCTCCACCAGACGCTGCAAATGCGCCTCGTCGATGAAGCTTTCGGCGTAGATCTTGTAGATGTCtt < 1:98313/113‑1 (MQ=255) gTTACCGGTCAGGCAATGGCTTCATCGACCAGCACTTGTGCTTCCTCCACCAGACGCTGCAAATGCGCCTCGTCGATGAAGCTTTCGGCGTAGATCTTGTAGATGTCTTCAGTACCCGACGGGCGCGCGGCGAACCAGCCATTGGCCGt > 4:302817/1‑149 (MQ=255) ccGGTCAGGCAATGGCTTCATCGACCAGCACTTGTGCTTCCTCCACCAGACGCTGCAAATGCGCCTCGTCGATGAAGCTTTCGGCGTAGATCTTGTAGATGTCTTCAGTACCCGACGGGCGCGCGGCGAACCAGCCATTGGCCGtcat < 4:54853/148‑1 (MQ=255) gCAATGGCTTCATCGACCAGCACTTGTGCTTCCTCCACCAGACGCTGCAAATGCGCCTCGTCGATGAAGCTTTCGGCGTAGATCTTGTAGATGTCTTCAGTACCCGACGGGCGCGCGGCGAACCAGCCATTGGCCGTCATCACCTTAAg > 2:193967/1‑149 (MQ=255) gCAATGGCTTCATCGACCAGCACTTGTGCTTCCTCCACCAGACGCTGCAAATGCGCCTCGTCGATGAAGCTTTCGGCGTAGATCTTGTAGATGTCTTCAGTACCCGACGGGCGCGCGGCGAACCAGCCATTGGCCGTCATCACCTTAAg > 1:229323/1‑149 (MQ=255) gCTTCATCGACCAGCACTTGTGCTTCCTCCACCAGACGCTGCAAATGCGCCTCgtcgatgaagccattgcctgaccggtaacaaaccgcttggttctgtggtgtgatgtaaattagaattaatcttatttactccgccgcagga < 7:136251‑M2/144‑92 (MQ=255) gCTTCATCGACCAGCACTTGTGCTTCCTCCACCAGACGCTGCAAATGCGCCTCgtcgatgaagccattgcctgaccggtaacaaaccgcttggttctgtggtgtgatgtaaattagaattaatcttatttactccgccgcagga > 8:136251‑M2/1‑53 (MQ=255) cTTCATCGACCAGCACTTGTGCTTCCTCCACCAGACGCTGCAAATGCGCCTCgtcgatgaagccattgcctgaccggtaacaaaccgcttggttctgtggtgtga < 6:16899‑M2/105‑54 (MQ=255) cTTCATCGACCAGCACTTGTGCTTCCTCCACCAGACGCTGCAAATGCGCCTCgtcgatgaagccattgcctgaccggtaacaaaccgcttggttctgtggtgtga > 5:16899‑M2/1‑52 (MQ=255) cATCGACgaggcgcatttgcagcgtctggtggaggaagcacaagtgctggtcgatgaagccattgcctgaccggtaacaaaccgcttggttctgtggtgtgatgtaaattagaattaatcttatttactccgccgcaggaccctcctc < 6:9978‑M1/148‑142 (MQ=255) tCGACgaggcgcatttgcagcgtctggtggaggaagcacaagtgctggtcgatgaagccattgcctgaccggtaacaaaccgcttggttctgtggtgtgatgtaaattagaattaatcttatttactccgccgcaggaccctcctcatg < 4:145809‑M1/149‑145 (MQ=255) tCGACgaggcgcatttgcagcgtctggtggaggaagcacaagtgctggtcgatgaagccattgcctgaccggtaacaaaccgcttggttctgtggtgtgatgtaaattagaattaatcttatttactccgccgcaggaccctcctcat > 5:86701‑M1/1‑5 (MQ=255) tCGACCAGCACTTGTGCTTCCTCCACCAGACGCTGCAAATGCGCCTCGTCGATGAAGCTTTCGGCGTAGATCTTGTAGATGTCTTCAGTACCCGACGGGCGCGCGGCGAACCAGCCATTGGCCGTCATCACCTTAAGCCCGCCAATCGc < 3:302817/149‑1 (MQ=255) cgacgaggcgcatttgcagcgtctggtggaggaagcacaagtgctggtcgatgaagccattgcctgaccggtaacaaaccgcttggttctgtggtgtgatgtaaattagaattaatc > 2:208056‑M1/1‑4 (MQ=255) cgacgaggcgcatttgcagcgtctggtggaggaagcacaagtgctggtcgatgaagccattgcctgaccggtaacaaaccgcttggttctgtggtgtgatgtaaattagaattaatc < 1:208056‑M1/117‑114 (MQ=255) gACCAGCACTTGTGCTTCCTCCACCAGACGCTGCAAATGCGCCTCGTCGATGAAGCTTTCGGCGTAGATCTTGTAGATGTCTTCAGTACCCGACGGGCGCGCGGCGAACCAGCCATTGGCCGTCATCACCTTAAGCCCGCCAATCGCCt > 5:35638/1‑149 (MQ=255) acgaggcgcatttgcagcgtctggtggaggaagcacaagtgctggtcgatgaagccattgcctgaccggtaacaaaccgcttggttctgtggtgtgatgtaaattagaattaatcttatttactccgccgcaggaccctcctc > 8:179955‑M1/1‑2 (MQ=255) acgaggcgcatttgcagcgtctggtggaggaagcacaagtgctggtcgatgaagccattgcctgaccggtaacaaaccgcttggttctgtggtgtgatgtaaattagaattaatcttatttactccgccgcaggaccctcctc < 7:179955‑M1/143‑142 (MQ=255) | CGGTACAGGGCAGGCAGGCCAGGCTCCGGTGGCGGCGCGGCGTCGATCATGAGGAGGGTCCTGCGGCGGAGTAAATAAGATTAATTCTAATTTACATCACACCACAGAACCAAGCGGTTTGTTACCGGTCAGGCAATGGCTTCATCGACCAGCACTTGTGCTTCCTCCACCAGACGCTGCAAATGCGCCTCGTCGATGAAGCTTTCGGCGTAGATCTTGTAGATGTCTTCAGTACCCGACGGGCGCGCGGCGAACCAGCCATTGGCCGTCATCACCTTAAGCCCGCCAATCGCCT > NC_002947/4059133‑4059427 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |