| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4059281 | 38 (0.780) | 4 (0.090) | 4/240 | NT | 9.5% | coding (1618/1638 nt) | pgm | phosphoglucomutase |
| ? | NC_002947 | = 4059323 | 41 (0.920) | coding (1576/1638 nt) | pgm | phosphoglucomutase | |||||
CATGAGGAGGGTCCTGCGGCGGAGTAAATAAGATTAATTCTAATTTACATCACACCACAGAACCAAGCGGTTTGTTACCGGTCAGGCAATGGCTTCATCGACCAGCACTTGTGCTTCCTCCACCAGACGCTGCAAATGCGCCTCGTCGATGAAGCTTTCGGCGTAGATCTTGTAGATGTCTTCAGTACCCGACGGGCGCGCGGCGAACCAGCCATTGGCCGTCATCACCTTAAGCCCGCCAATCGCCTGGCCATTGCCTGGGGCGTGGCTGAGGATCTGCACGATCGGCT > NC_002947/4059180‑4059469 | cATGAGGAGGGTCCTGCGGCGGAGTAAATAAGATTAATTCTAATTTACATCACACCACAGAACCAAGCGGTTTGTTACCGGTCAGGCAATGGCTTCATCGACCAGCACTTGTGCTTCCTCCACCAGACGCTGCAAATGCGCCTCgtcga < 4:145809‑M2/149‑6 (MQ=255) aTGAGGAGGGTCCTGCGGCGGAGTAAATAAGATTAATTCTAATTTACATCACACCACAGAACCAAGCGGTTTGTTACCGGTCAGGCAATGGCTTCATCGACCAGCACTTGTGCTTCCTCCACCAGACGCTGCAAATGCGCCTCgtcga > 5:86701‑M2/1‑143 (MQ=255) gaggagGGTCCTGCGGCGGAGTAAATAAGATTAATTCTAATTTACATCACACCACAGAACCAAGCGGTTTGTTACCGGTCAGGCAATGGCTTCATCGACCAGCACTTGTGCTTCCTCCACCAGACGCTGCAAATGCGCCTCgtcgatg < 6:9978‑M2/148‑8 (MQ=255) gaggagGGTCCTGCGGCGGAGTAAATAAGATTAATTCTAATTTACATCACACCACAGAACCAAGCGGTTTGTTACCGGTCAGGCAATGGCTTCATCGACCAGCACTTGTGCTTCCTCCACCAGACGCTGCAAATGCGCCTCgt > 8:179955‑M2/1‑141 (MQ=255) gaggagGGTCCTGCGGCGGAGTAAATAAGATTAATTCTAATTTACATCACACCACAGAACCAAGCGGTTTGTTACCGGTCAGGCAATGGCTTCATCGACCAGCACTTGTGCTTCCTCCACCAGACGCTGCAAATGCGCCTCgt < 7:179955‑M2/143‑3 (MQ=255) ggTCCTGCGGCGGAGTAAATAAGATTAATTCTAATTTACATCACACCACAGAACCAAGCGGTTTGTTACCGGTCAGGCATTGGCTTCATCGACCAGCACTTGTGCTTCCTCCACCAGACGCTGCAAATGCGCCTCGTCGATGAAGCtt > 4:280236/1‑148 (MQ=255) ggAGTAAATAAGATTAATTCTAATTTACATCACACCACAGAACCAAGCGGTTTGTTACCGGTCAGGCAATGGCTTCATCGACCAGCACTTGTGCTTCCTCCACCAGACGCTGCAAATGCGCCTCGTCGATGAAGCTTTCGGCGTAGATc < 3:145809/149‑1 (MQ=255) gTAAATAAGATTAATTCTAATTTACATCACACCACAGAACCAAGCGGTTTGTTACCGGTCAGGCATTGGCTTCATCGACCAGCACTTGTGCTTCCTCCACCAGACGCTGCAAATGCGCCTCGTCGATGAAGCTTTCGGCGTAGATCTTg < 3:280236/149‑1 (MQ=255) aaTAAGATTAATTCTAATTTACATCACACCACAGAACCAAGCGGTTTGTTACCGGTCAGGCAATGGCTTCATCGACCAGCACTTGTGCTTCCTCCACCAGACGCTGCAAATGCGCCTCGTCGATGAAGCTTTCGGCGTAGATCTTg > 6:17474/1‑146 (MQ=255) aaTAAGATTAATTCTAATTTACATCACACCACAGAACCAAGCGGTTTGTTACCGGTCAGGCAATGGCTTCATCGACCAGCACTTGTGCTTCCTCCACCAGACGCTGCAAATGCGCCTCGTCGATGAAGCTTTCGGCGTAGATCTTGTAg < 7:233200/149‑1 (MQ=255) aTAAGATTAATTCTAATTTACATCACACCACAGAACCAAGCGGTTTGTTACCGGTCAGGCAATGGCTTCATCGACCAGCACTTGTGCTTCCTCCACCAGACGCTGCAAATGCGCCTCGTCGATGAAGCTTTCGGCGTAGATCTTGTAGa < 8:290990/149‑1 (MQ=255) tAAGATTAATTCTAATTTACATCACACCACAGAACCAAGCGGTTTGTTACCGGTCAGGCAATGGCTTCATCGACCAGCACTTGTGCTTCCTCCACCAGACGCTGCAAATGCGCCTCGTCGATGAAGCTTTCGGCGTAGATCTTGTAGAt < 2:126102/149‑1 (MQ=255) gATTAATTCTAATTTACATCACACCACAGAACCAAGCGGTTTGTTACCGGTCAGGCAATGGCTTCATCGACCAGCACTTGTGCTTCCTCCACCAGACGCTGCAAATGCGCCTCgtcg > 2:208056‑M2/1‑113 (MQ=255) gATTAATTCTAATTTACATCACACCACAGAACCAAGCGGTTTGTTACCGGTCAGGCAATGGCTTCATCGACCAGCACTTGTGCTTCCTCCACCAGACGCTGCAAATGCGCCTCgtcg < 1:208056‑M2/117‑5 (MQ=255) aTTAATTCTAATTTACATCACACCACAGAACCAAGCGGATTGTTACCGGTCAGGCAATGGCTTCATCGACCAGCACATGTGCTTCCTCCACCAGACGCTGCAAATGCGCCTCGTCGATGAAGCTTTCGGCGTAGATCTTGTAGATGTCt > 2:42256/1‑149 (MQ=255) ttCTAATTTACATCACACCACAGAACCAAGCGGTTTGTTACCGGTCAGGCAATGGCTTCATCGACCAGCACTTGTGCTTCCTCCACCAGACGCTGCAAATGCGCCTCGTCGATGAAGCTTTCGGCGTAGATCTTGTAGATGTCTTCAg > 4:251175/1‑148 (MQ=255) ttCTAATTTACATCACACCACAGAACCAAGCGGTTTGTTACCGGTCAGGCAATGGCTTCATCGACCAGCACTTGTGCTTCCTCCACCAGACGCTGCAAATGCGCCTCGTCGATGAAGCTTTCGGCGTAGATCTTGTAGATGTCTTCAGt < 5:17474/149‑1 (MQ=255) aTTTACATCACACCACAGAACCAAGCGGTTTGTTACCGGTCAGGCAATGGCTTCATCGACCAGCACTTGTGCTTCCTCCACCAGACGCTGCAAATGCGCCTCGTCGATGAAGCTTTCGGCGTAGATCTTGTAGATGTCTTCAGTAccc > 4:296278/1‑148 (MQ=255) aTTTACATCACACCACAGAACCAAGCGGTTTGTTACCGGTCAGGCAATGGCTTCATCGACCAGCACTTGTGCTTCCTCCACCAGACGCTGCAAATGCGCCTCGTCGATGAAGCTTTCGGCGTAGATCTTGTAGATGTCTTCAGTACCCg > 4:291662/1‑149 (MQ=255) aTCACACCACAGAACCAAGCGGTTTGTTACCGGTCAGGCAATGGCTTCATCGACCAGCACTTGTGCTTCCTCCACCAGACGCTGCAAATGCGCCTCGTCGATGAAGCTTTCGGCGTAGATCTTGTAGATGTCTTCAGTACCCGACGGgc < 5:9978/149‑1 (MQ=255) tCACACCACAGAACCAAGCGGTTTGTTACCGGTCAGGCAATGGCTTCATCGACCAGCACTTGTGCTTCCTCCACCAGACGCTGCAAATGCGCCTCGTCGATGAAGCTTTCGGCGTAGATCTTGTAGATGTCTTCAGTACCCGACGGgcg > 3:96657/1‑149 (MQ=255) cAAGCGGTTTGTTACCGGTCAGGCAATGGCTGCATCGACCAGCACTTGTGCTTCCTCCACCAGACGCTGCAAATGCGCCTCGTCGATGACGCGTTCGGCGTAGATCTTGTAGCTGTCGTCAGTACCCGCCGGGCGCGCGGCGCACCacc > 6:261177/1‑147 (MQ=255) gTTTGTTACCGGTCAGGCAATGGCTTCATCGACCAGCACTTGTGCTTCCTCCACCAGACGCTGCAAATGCGCCTCGTCGATGAAGCTTTCGGCGTAGATCTTGTAGATGTCtt > 2:98313/1‑113 (MQ=255) gTTTGTTACCGGTCAGGCAATGGCTTCATCGACCAGCACTTGTGCTTCCTCCACCAGACGCTGCAAATGCGCCTCGTCGATGAAGCTTTCGGCGTAGATCTTGTAGATGTCTTCAGTACCCGACGGGCGCGCGGCGAACCAGCCATTgg < 3:72037/149‑1 (MQ=255) gTTTGTTACCGGTCAGGCAATGGCTTCATCGACCACCACTTGTGCTTCCTCCACCAGACGCTGCAAATGCGCCTCGTCGATGAAGCTTTCGGCGTAGATCTTGTAGATGTCtt < 1:98313/113‑1 (MQ=255) gTTACCGGTCAGGCAATGGCTTCATCGACCAGCACTTGTGCTTCCTCCACCAGACGCTGCAAATGCGCCTCGTCGATGAAGCTTTCGGCGTAGATCTTGTAGATGTCTTCAGTACCCGACGGGCGCGCGGCGAACCAGCCATTGGCCGt > 4:302817/1‑149 (MQ=255) ccGGTCAGGCAATGGCTTCATCGACCAGCACTTGTGCTTCCTCCACCAGACGCTGCAAATGCGCCTCGTCGATGAAGCTTTCGGCGTAGATCTTGTAGATGTCTTCAGTACCCGACGGGCGCGCGGCGAACCAGCCATTGGCCGtcat < 4:54853/148‑1 (MQ=255) gCAATGGCTTCATCGACCAGCACTTGTGCTTCCTCCACCAGACGCTGCAAATGCGCCTCGTCGATGAAGCTTTCGGCGTAGATCTTGTAGATGTCTTCAGTACCCGACGGGCGCGCGGCGAACCAGCCATTGGCCGTCATCACCTTAAg > 1:229323/1‑149 (MQ=255) gCAATGGCTTCATCGACCAGCACTTGTGCTTCCTCCACCAGACGCTGCAAATGCGCCTCGTCGATGAAGCTTTCGGCGTAGATCTTGTAGATGTCTTCAGTACCCGACGGGCGCGCGGCGAACCAGCCATTGGCCGTCATCACCTTAAg > 2:193967/1‑149 (MQ=255) gCTTCATCGACCAGCACTTGTGCTTCCTCCACCAGACGCTGCAAATGCGCCTCgtcgatgaagccattgcctgaccggtaacaaaccgcttggttctgtggtgtgatgtaaattagaattaatcttatttactccgccgcagga > 8:136251‑M2/1‑53 (MQ=255) gCTTCATCGACCAGCACTTGTGCTTCCTCCACCAGACGCTGCAAATGCGCCTCgtcgatgaagccattgcctgaccggtaacaaaccgcttggttctgtggtgtgatgtaaattagaattaatcttatttactccgccgcagga < 7:136251‑M2/144‑92 (MQ=255) cTTCATCGACCAGCACTTGTGCTTCCTCCACCAGACGCTGCAAATGCGCCTCgtcgatgaagccattgcctgaccggtaacaaaccgcttggttctgtggtgtga > 5:16899‑M2/1‑52 (MQ=255) cTTCATCGACCAGCACTTGTGCTTCCTCCACCAGACGCTGCAAATGCGCCTCgtcgatgaagccattgcctgaccggtaacaaaccgcttggttctgtggtgtga < 6:16899‑M2/105‑54 (MQ=255) tCGACCAGCACTTGTGCTTCCTCCACCAGACGCTGCAAATGCGCCTCGTCGATGAAGCTTTCGGCGTAGATCTTGTAGATGTCTTCAGTACCCGACGGGCGCGCGGCGAACCAGCCATTGGCCGTCATCACCTTAAGCCCGCCAATCGc < 3:302817/149‑1 (MQ=255) gACCAGCACTTGTGCTTCCTCCACCAGACGCTGCAAATGCGCCTCGTCGATGAAGCTTTCGGCGTAGATCTTGTAGATGTCTTCAGTACCCGACGGGCGCGCGGCGAACCAGCCATTGGCCGTCATCACCTTAAGCCCGCCAATCGCCt > 5:35638/1‑149 (MQ=255) cAGCACTTGTGCTTCCTCCACCAGACGCTGCAAATGCGCCTCGTCGATGAAGCTTTCGGCGTAGATCTTGTAGATGTCTTCAGTACCCGACGGGCGCGCGGCGAACCAGCCATTGGCCGTCATCACCTTAAGCCCGCCAATCGCCTGGc > 5:86784/1‑149 (MQ=255) cAGCACTTGTGCTTCCTCCACCAGACGCTGCAAATGCGCCTCGTCGATGAAGCTTTCGGCGTAGATCTTGTAGATGTCTTCAGTACCCGACGGGCGCGCGGCGAACCAGCCATTGGCCGTCATCACCTTAAGCCCGCCAATCGCCTGGc > 6:58181/1‑149 (MQ=255) gCACTTGTGCTTCCTCCACCAGACGCTGCAAATGCGCCTCGTCGATGAAGCTTTCGGCGTAGATCTTGTAGATGTCTTCAGTACCCGACGGGCGCGCGGCGAACCAGCCATTGGCCGTCATCACCTTAAGCCCGCCAATCGCCTGGCCa < 3:251175/149‑1 (MQ=255) cTTGTGCTTCCTCCACCAGACGCTGCAAATGCGCCTCGTCGATGAAGCTTTCGGCGTAGATCTTGTAGATGTCTTCAGTACCCGACGGGCGCGCGGCGAACCAGCCATTGGCCGTCATCACCTTAAGCCCGCCAATCACCTGGCCATTg > 3:165811/1‑149 (MQ=255) cTTCCTCCACCAGACGCTGCAAATGCGCCTCGTCGATGAAGCTTTCGGCGTAGATCTTGTAGATGTCTTCAGTACCCGACGGGCGCGCGGCGAACCAGCCATTGGCCGTCATCACCTTAAGCCCGCCAATCGCCTGGCCATTGCCTggg > 3:67294/1‑149 (MQ=255) cctccACCAGCCGCTGCAAATGCGCCTCGTCGATGAAGCTTTCGGCGTAGATCTTGTAGATGTCTTCAGTACCCGACGGGCGCGCGGCGAACCAGCCATTGGCCGGCATCACCTTACGCCCGCCAATCGCCTGGCCATTGCCTGGGGc < 5:261177/148‑1 (MQ=255) cctccACCAGACGCTGCAAATGCGCCTCGTCGATGAAGCTTTCGGCGTAGATCTTGTAGATGTCTTCAGTACCCGACGGGCGCGCGGCGAACCAGCCATTGGCCGTCATCACCTTAAGCCCGCCAATCACCTGGCCATTGCCTgggg < 4:165811/147‑1 (MQ=255) ctccACCAGACGCTGCAAATGCGCCTCGTCGATGAAGCTTTCGGCGTAGATCTTGTAGATGTCTTCAGTACCCGACGGGCGCGCGGCGAACCAGCCATTGGCCGTCATCACCTTAAGCCCGCCAATCGCCTGGCCATTGCCTGGGGCGt > 6:312503/1‑149 (MQ=255) ctccACCAGACGCTGCAAATGCGCCTCGTCGATGAAGCTTTCGGCGTAGATCTTGTAGATGTCTTCAGTACCCGACGGCCGCGCGGCGAACCAGCCATTGGCCGTCATCACCTTAAGCCCGCCAATCGCCTGGCCATTGCCTGGGGCGt > 8:254505/1‑149 (MQ=255) caccaGACGCTGCAAATGCGCCTCGTCGATGAAGCTTTCGGCGTAGATCTTGTAGATGTCTTCAGTACCCGACGGGCGCGCGGCGAACCAGCCATTGGCCGTCATCACCTTAAGCCCGCCAATCGCCTGGCCATTGCCTGGGGCGTg < 1:42256/147‑1 (MQ=255) caccaGACGCTGCAAATGCGCCTCGTCGATGAAGCTTTCGGCGTAGATCTTGTAGATGTCTTCAGTACCCGACGGGCGCGCGCCGAACCCGCCATTGGCCGGCATCCCCATACGCCAGCCAATCGCCTGGCCATTGCCAGGGGCCTgcc > 3:212907/1‑147 (MQ=255) ccaGACGCTGCAAATGCGCCTCGTCGATGAAGCTTTCGGCGTAGATCTTGTAGATGTCTTCAGTACCCGACGGGCGCGCGGCGAACCAGCCATTGGCCGTCATCACCTTAAGCCCGCCAATCGCCTGGCCATTGCCTGGGGCGTGGCt > 6:60062/1‑148 (MQ=255) caGACGCTGCAAATGCGCCTCGTCGATGAAGCTTTCGGCGTAGATCTTGTAGATGTCTTCAGTACCCGACGGGCGCGCGGCGAACCAGCCATTGGCCGTCATCACCTTAAGCCCGCCAATCGc < 8:183159/123‑1 (MQ=255) caGACGCTGCAAATGCGCCTCGTCGATGAAGCTTTCGGCGTAGATCTTGTAGATGTCTTCAGTACCCGACGGGCGCGCGGCGAACCAGCCATTGGCCGTCATCACCTTAAGCCCGCCAATCGc > 7:183159/1‑123 (MQ=255) aGACGCTGCAAATGCGCCTCGTCGATGAAGCTTTCGGCGTAGATCTTGTAGATGTCTTCAGTACCCGACGGGCGCGCGGCGAACCAGCCATTGGCCGTCATCACCTTAAGCCCGCCAATCGCCTGGCCATTGCCTGGGGCGTGGCTGAg < 5:58181/149‑1 (MQ=255) tGCAAATGCGCCTCGTCGATGAAGCTTTCGGCGTAGATCTTGTAGATGTCTTCAGTACCCGACGGGCGCGCGGCGAACCAGCCATTGGCCGTCATCACCTTAAGCCCGCCAATCGCCTGGCCATTGCCTGGGGCGTgg < 7:12262/138‑1 (MQ=255) tGCAAATGCGCCTCGTCGATGAAGCTTTCGGCGTAGATCTTGTAGATGTCTTCAGTACCCGACGGGCGCGCGGCGAACCAGCCATTGGCCGTCATCACCTTAAGCCCGCCAATCGCCTGGCCATTGCCTGGGGCGTgg > 8:12262/1‑138 (MQ=255) tGCGCCTCGTCGATGAAGCTTTCGGCGTAGATCTTGTAGATGTCTTCAGTACCCGACGGGCGCGCGGCGAACCAGCCATTGGCCGTCATCACCTTAAGCCCGCCAATCGCCTGGCCCTTGCCTGGGGCGTGGCTGAGGATCTGCACGAt < 1:193967/149‑1 (MQ=255) gcCTCGTCGATGAAGCTTTCGGCGTAGATCTTGTAGATGTCTTCAGTACCCGACGGGCGCGCGGCGAACCAGCCATTGGCCGTCATCACCTTAAGCCCGCCAATCGCCTGGCCATTGCCTGGGGCGTGGCTGAGGAt > 2:190632/1‑137 (MQ=255) gcCTCGTCGATGAAGCTTTCGGCGTAGATCTTGTAGATGTCTTCAGTACCCGACGGGCGCGCGGCGAACCAGCCATTGGCCGTCATCACCTTAAGCCCGCCAATCGCCTGGCCATTGCCTGGGGCGTGGCTGAGGAt < 1:190632/137‑1 (MQ=255) ccTCGTCGATGAAGCTTTCGGCGTAGATCTTGTAGATGTCTTCAGTACCCGACGGGCGCGCGGCGAACCAGCCATTGGCCGTCATCACCTTAAGCCCGCCAATCGCCTGGCCATTGCCTGGGGCGTGGCTGAGGATCTGCACGATCGGc > 4:139035/1‑149 (MQ=255) cTCGTCGATGAAGCTTTCGGCGTAGATCTTGTAGATGTCTTCAGTACCCGACGGGCGCGCGGCGAACCAGCCATTGGCCGTCATCACCTTAAGCCCGCCAATCGCCTGGCCATTGCCTGGGGCGTGGCTGAGGATCTGCACGATCGGCt < 7:254505/149‑1 (MQ=255) tcgtcgATGAAGCTTTCGGCGTAGATCTTGTAGATGTCTTCAGTACCCGACGGGCGCGCGGCGAACCAGCCATTGGCCGTCATCACCTTAAGAACGCCAATCGCCTGGCCATTGCCTGGGGCTTGGCTGAGGATCTGCACGAACTGCt > 7:100539/1‑148 (MQ=255) | CATGAGGAGGGTCCTGCGGCGGAGTAAATAAGATTAATTCTAATTTACATCACACCACAGAACCAAGCGGTTTGTTACCGGTCAGGCAATGGCTTCATCGACCAGCACTTGTGCTTCCTCCACCAGACGCTGCAAATGCGCCTCGTCGATGAAGCTTTCGGCGTAGATCTTGTAGATGTCTTCAGTACCCGACGGGCGCGCGGCGAACCAGCCATTGGCCGTCATCACCTTAAGCCCGCCAATCGCCTGGCCATTGCCTGGGGCGTGGCTGAGGATCTGCACGATCGGCT > NC_002947/4059180‑4059469 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |