New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4095364	51 (1.040)	3 (0.060)	3/248	NT	6.0%	coding (120/765 nt)	PP_3603	GntR family transcriptional regulator
	?	NC_002947	= 4095423	45 (0.970)					coding (61/765 nt)	PP_3603	GntR family transcriptional regulator

CCGGTGCATCCAGCACGAATGTACCGATGCCGTGGCGAGTCTCTACCTGCCCGGCGGCCTGCAACCGCGAGATCGCCTCACGCACCACCGTGCGACTGACGCCCTCTTCGGCCATGATCTGCGATTCGGTCGGCAGCTTGTCGCCGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4095216‑4095364 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgcgcAGTCTGGCCCAGGAACTGGTCACGGTGCTGACCGAACGCATTCGCAGCGGCCAGCTCAAGCGCGGCGACAAGCTGCCGACCGAATCGCAGATCATGGCCGAAGAGGGCGTCAGTCGCACGGTGGTGCGTGAGGCGATCTCGCGGTTG  <  NC_002947/4095423‑4095277                                                                                                                                                                                                                                                                                                          CCGGTGCATCCAGCACGAATGTACCGATGCCGTGGCGAGTCTCTACCTGCCCGGCGGCCTGCAACCGCGAGATCGCCTCACGCACCACCGTGCGACTGACGCCCTCTTCGGCCATGATCTGCGATTCGGTCGGCAGCTTGTCGCCGCGC                                                                                                                                                     >  4:34829/1‑149                                                                 CCGCGAGATCGCCTCACGCACCACCGTGCGACTGACGCCCTCTTCGGCCATGATCTGCGATTCGGTCGGCAGCTTGTCGCCGCGCAGTCTGGCCCAGGAACTGGTCACGGTGCTGACCGAACGCATTCGCAGCGGCCAGCTCAAGCGCG                                                                                     <  1:305675/149‑1                                                                                                 TGACGCCCTCTTCGGCCATGATCTGCGATTCGGTCGGCAGCTTGTCGCCGCGCAGTCTGGCCCAGGAACTGGTCACGGTGCTGACCGAACGCATTCGCAGCGGCCAGCTCAAGCGCGG                                                                                    <  5:253293/118‑1                                                                                                 TGACGCCCTCTTCGGCCATGATCTGCGATTCGGTCGGCAGCTTGTCGCCGCGCAGTCTGGCCCAGGAACTGGTCACGGTGCTGACCGAACGCATTCGCAGCGGCCAGCTCAAGCGCGG                                                                                    >  6:253293/1‑118                                                                                                                                                  GCGCAGTCTGGCCCAGGAACTGGTCACGGTGCTGACCGAACGCATTCGCAGCGGCCAGCTCAAGCGCGGCGACAAGCTGCCGACCGAATCGCAGA                                                          >  7:137880/1‑95                                                                                                                                                  GCGCAGTCTGGCCCAGGAACTGGTCACGGTGCTGACCGAACGCATTCGCAGCGGCCAGCTCAAGCGCGGCGACAAGCTGCCGACCGAATCGCAGA                                                          <  8:137880/95‑1                                                                                                                                                    GCAGTCTGGCCCAGGAACTGGTCACGGTGCTGACCGAACGCATTCGCAGCGGCCAGCTCAAGCGCGGCGACAAGCTGCCGACCGAATCGCAGATCATGGCCGAAGAGGGCGTCAGTCGCACGGTGGTGCGTGAGGCGATCTCGCGGTTG  <  5:55779/149‑1                                                                                                                                                    GCAGTCTGGCCCAGGAACTGGTCACGGTGCTGACCGAACGCATTCGCAGCGGCCAGCTCAAGCGCGGCGACAAGCTGCCGACCGAATCGCAGATCATGGCCGAAGAGGGCGTCAGTCGCACGGTGGTGCGTGAGGCGATCTCGCGGTTG  <  7:214554/149‑1                                                                                                                                                                                                                                                                                                          CCGGTGCATCCAGCACGAATGTACCGATGCCGTGGCGAGTCTCTACCTGCCCGGCGGCCTGCAACCGCGAGATCGCCTCACGCACCACCGTGCGACTGACGCCCTCTTCGGCCATGATCTGCGATTCGGTCGGCAGCTTGTCGCCGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4095216‑4095364 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgcgcAGTCTGGCCCAGGAACTGGTCACGGTGCTGACCGAACGCATTCGCAGCGGCCAGCTCAAGCGCGGCGACAAGCTGCCGACCGAATCGCAGATCATGGCCGAAGAGGGCGTCAGTCGCACGGTGGTGCGTGAGGCGATCTCGCGGTTG  <  NC_002947/4095423‑4095277

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.