| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4211401 = | 31 (0.630) | 3 (0.070) | 3/246 | NT | 10.0% | coding (91/366 nt) | PP_3693 | transcriptional regulator MvaT |
| ? | NC_002947 | 4211445 = | 25 (0.540) | coding (47/366 nt) | PP_3693 | transcriptional regulator MvaT | |||||
GCTTCCTGGTTTAGGATACTCAATTTACATGCCCATCTAAATCATTGAGGATCACTAATGTCTCGTCTGGCCGAATTCCGCAAGCTGGAACAATCTTTGGCTGCGCAGCTCGCTGAGCTTGAAGCCATGAAGGGCAGCTCCGAGCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4211548‑4211401‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgagctgcGCAGCCAAAGATTGTTCCAGCTTGCGGAATTCGGCCAGACGAGACATTAGTGATCCTCAATGATTTAGATGGGCATGTAAATTGAGTATCCTAAACCAGGAAGCAAGGTTCTGCTACGTTGGTTTCTCTTTTTTTGACTTGAAGCTTC > NC_002947/4211445‑4211592 GCTTCCTGGTTTAGGATACTCAATTTACATGCCCATCTAAATCATTGAGGATCACTAATGTCTCGTCTGGCCGAATTCCGCAAGCTGGAACAATCTTTGGCTGCGCAGCTCGCTGAGCTTGAAGCCATGAAGGGCAGCTCCGAGCTGC < 4:95287/148‑1 CACTAATGTCTCGTCTGGCCGAATTCCGCAAGCTGGAACAATCTTTGGCTGCGCAGCTCGCTGAGCTTGAAGCCATGAAGGGCAGCTCCGAG > 7:147877/1‑92 CACTAATGTCTCGTCTGGCCGAATTCCGCAAGCTGGAACAATCTTTGGCTGCGCAGCTCGCTGAGCTTGAAGCCATGAAGGGCAGCTCCGAG < 8:147877/92‑1 TGCGCAGCTCGCTGAGCTTGAAGCCATGAAGGGCAGCTCCGAGCTGCGCAGCCAAAGATTGTTCCAGCTTGCGGAATTCGGCCAGACGAGACATTAGTGATCCTCAATGATTTAGATGGGCATGTAAATTGAGTATCCTAAACCAGG > 3:235301/1‑147 AGCTCGCTGAGCTTGAAGCCATGAAGGGCAGCTCCGAGCTGCGCAGCCAAAGATTGTTCCAGCTTGCGGAATTCGGCCAGACGAGACATTAGTGATCCTCAATGATTTAGATGGGCATGTAAATTGAGT > 3:215443/1‑129 AGCTCGCTGAGCTTGAAGCCATGAAGGGCAGCTCCGAGCTGCGCAGCCAAAGATTGTTCCAGCTTGCGGAATTCGGCCAGACGAGACATTAGTGATCCTCAATGATTTAGATGGGCATGTAAATTGAGT < 4:215443/129‑1 CGCAGCCAAAGATTGTTCCAGCTTGCGGAATTCGGCCAGACGAGACATTAGTGATCCTCAATGATTTAGATGGGCATGTAAATTGAGTATCCTAAACCAGGAAGCAAGGTTCTGCTACGTTGGTTTCTCTTTTTTTGACTTGAAGCTTC < 3:95287/149‑1 GCTTCCTGGTTTAGGATACTCAATTTACATGCCCATCTAAATCATTGAGGATCACTAATGTCTCGTCTGGCCGAATTCCGCAAGCTGGAACAATCTTTGGCTGCGCAGCTCGCTGAGCTTGAAGCCATGAAGGGCAGCTCCGAGCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4211548‑4211401‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgagctgcGCAGCCAAAGATTGTTCCAGCTTGCGGAATTCGGCCAGACGAGACATTAGTGATCCTCAATGATTTAGATGGGCATGTAAATTGAGTATCCTAAACCAGGAAGCAAGGTTCTGCTACGTTGGTTTCTCTTTTTTTGACTTGAAGCTTC > NC_002947/4211445‑4211592 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |