New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4251800 =	39 (0.800)	3 (0.070)	3/246	NT	7.9%	coding (233/795 nt)	PP_3726	enoyl‑CoA hydratase/isomerase family protein
	?	NC_002947	4251852 =	33 (0.720)					coding (181/795 nt)	PP_3726	enoyl‑CoA hydratase/isomerase family protein

CGCAGCTTCTGCGCTGGCGCCGACCTGGCCGAATGGGCTGCCGCCGAAGCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4251852‑4251800 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaagctgcGGCCGCTACCGGTCAGCACCACCACGCGTACGGCGGGGTCGTCGGCATGGCTGTCGAGCAAGGCGTGCAGTTGCTTGAGGGTGGGAATGTCCAGCGCGTTGCGCTGCTCGGGGCGGTTGAGGGTGATCCAGGCAACGCCGGCTTCGA  >  NC_002947/4251852‑4251998                                                                                                                                                                                                          CGCAGCTTCTGCGCTGGCGCCGACCTGGCCGAATGGGCTGCCGCCGAAGCTGCGGCCGCTACCGGTCAGCACCACCACGCGTACGGCGGGGTCGTCGGCATGGCTGTCGAGCAAGGCGTGCAGTTGCTTGAGGGTGGGATTGTCCAGCG                                                     >  1:255511/1‑149         CTGCGCTGGCGCCGACCTGGCCGAATGGGCTGCCGCCGAAGCTGCGGCCGCTACCGGTCAGCACCACCACGCGTACGGCGGGGTCGTCGGCATGGCTGTCGAGCAAGGCGTGCAGTTGC                                                                           <  5:203536/119‑1         CTGCGCTGGCGCCGACCTGGCCGAATGGGCTGCCGCCGAAGCTGCGGCCGCTACCGGTCAGCACCACCACGCGTACGGCGGGGTCGTCGGCATGGCTGTCGAGCAAGGCGTGCAGTTGC                                                                           >  6:203536/1‑119                                      ccagCGCCGAAGCTGCGGCCGCTACCGGTCAGCACCACCCCGCGTACGGCGGGGTCGTCGGCATGGCTGTCGCGCAAGGCGTGCAGGTGCTTGAGGGTGGGAATGTCCAGCGCGTTGCGCTGCTCGGGGCGGTT                               <  6:309762/130‑1                                              GAAGCTGCGGCCGCTACCGGTCAGCACCACCACGCGTACGGCGGGGTCGTCGGCATGGCTGTCGAGCAAGGCGTGCAGTTGCTTGAGGGTGGGAATGTCCAGCGCGTTGCGCTGCTCGGGGCGGTTGAGGGTGATCCAGGCAACGCCGG        >  3:81242/1‑149                                                   TGCGGCCGCTACCGGTCAGCACCACCACGCGTACGGCGGGGTCGTCGGCATGGCTGTCGAGCAAGGCGTGCAGTTGCTTGAGGGTGGGAATGTCCAGCGCGTTGCGCTGCTCGGGGCGGTTGAGGGTGATCCAGGCAACGCCGGCTTC    >  2:252952/1‑148                                                     CGGCCGCTACCGGTCAGCACCACCACGCGTACGGCGGGGTCGTCGGCATGGCTGTCGAGCAAGGCGTGCAGTTGCTTGAGGGTGGGAATGTCCAGCGCGTTGCGCTGCTCGGGGCGGTTGAGGGTGATCCAGGCAACGCCGGCTTCGA  <  7:93698/148‑1                                                                                                                                                                                                          CGCAGCTTCTGCGCTGGCGCCGACCTGGCCGAATGGGCTGCCGCCGAAGCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4251852‑4251800 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaagctgcGGCCGCTACCGGTCAGCACCACCACGCGTACGGCGGGGTCGTCGGCATGGCTGTCGAGCAAGGCGTGCAGTTGCTTGAGGGTGGGAATGTCCAGCGCGTTGCGCTGCTCGGGGCGGTTGAGGGTGATCCAGGCAACGCCGGCTTCGA  >  NC_002947/4251852‑4251998

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.