New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4585056 =	47 (0.960)	3 (0.060)	3/252	NT	6.4%	coding (528/1986 nt)	glgE	alpha‑1,4‑glucan:maltose‑1‑phosphate maltosyltransferase
	?	NC_002947	4585084 =	43 (0.910)					coding (500/1986 nt)	glgE	alpha‑1,4‑glucan:maltose‑1‑phosphate maltosyltransferase

CCGATGATCAGGTGGCCGTGTTTCTCGACCCGACCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4585093‑4585056 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccaccTGATCATCGGTACTGAGCGTGGCCAGGCGGCTCTGCACAGCCTCGAGCGCCTCGCGCAGGGCGCCGCTGCACAGCTCGATGCCTTTGCCCAGCATCAAGCGGCCTTCTTCCAGTTCCAGTTTTACCTCGACGCCGGCGTGGTACTTC  >  NC_002947/4585084‑4585230                                                                                                                                                                                           CCGATGATCAGGTGGCCGTGTTTCTCGACCCGACCACCTGATCATCGGTACTGAGCGTGGCCAGGCGGCTCTGCACAGCCTCGAGCGCCTCGCGCAGGGCGCCGCTGCACAGCTCGATGCCTTTGCCCAGCATCAAGCGGCCTTCTTC                                       >  2:228002/1‑148         CAGGTGGCCGTGTTTCTCGACCCGACCACCTGATCATCGGTACTGAGCGTGGCCAGGCGGCTCTGCACAGCCTCGAGCGCCTCGCGCAG                                                                                          >  3:165323/1‑89         CAGGTGGCCGTGTTTCTCGACCCGACCACCTGATCATCGGTACTGAGCGTGGCCAGGCGGCTCTGCACAGCCTCGAGCGCCTCGCGCAG                                                                                          <  4:165323/89‑1                                  CCACCTGATCATCGGTACTGAGCGTGGCCAGGCGGCTCTGCACAGCCTCGAGCGCGTCGCGCAGGGCGCCGCTGCACAGCTCGATGCCTTTGCCCAGCATCAAGCGGCCTTCTTCCAGTTCCAGTTTTACCTCGACGCCGGCGTGGTAC     <  2:276379/149‑1                                     CCTGATCATCGGTACTGAGCGTGGCCAGGCGGCTCTGCACAGCCTCGAGCGCCTCGCGCAGGGCGCCGCTGCACAGCTCGATGCCTTTGCCCAGCATCAAGCGGCCTTCTTCCAGTTCCAGTTTTACCTCGACGCCGGCGTGGTACTTC  <  5:262801/149‑1                                     CCTGATCATCGGTACTGAGCGTGGCCAGGCGGCTCTGCACAGCCTCGAGCGCCTCGCGCAGGGCGCCGCTGCACAGCTCGATGCCTTTGCCCAGCATCAAGCGGCCTTCTTCCAGTTCCAGTTTTACCACGCCGGCGTCGAGGTAaaac  <  7:18048/149‑5                                                                                                                                                                                           CCGATGATCAGGTGGCCGTGTTTCTCGACCCGACCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4585093‑4585056 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccaccTGATCATCGGTACTGAGCGTGGCCAGGCGGCTCTGCACAGCCTCGAGCGCCTCGCGCAGGGCGCCGCTGCACAGCTCGATGCCTTTGCCCAGCATCAAGCGGCCTTCTTCCAGTTCCAGTTTTACCTCGACGCCGGCGTGGTACTTC  >  NC_002947/4585084‑4585230

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.