| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4639237 | 42 (0.860) | 3 (0.060) | 3/250 | NT | 7.1% | coding (541/696 nt) | PP_4104 | glutathione S‑transferase family protein |
| ? | NC_002947 | = 4639263 | 38 (0.810) | coding (515/696 nt) | PP_4104 | glutathione S‑transferase family protein | |||||
GCCCGGGATTTTCAGGCCACGCTGCACGGCTGGCCGTTCGAGGAAATTCGCCAGCACGCGCTGCACTTCCTTGAACTGGTCGAAGCCCACCAGGTCACGGGCGTTGTAGCGCTCCACCAGGTTACGCACCCAAGGGAAGATGGCGATGTCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4639085‑4639237‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtcggcAGTGGATGGCTGAGGAATACAGCATCGCCGACATCGCCATCTTCCCTTGGGTGCGTAACCTGGTGGAGCGCTACAACGCCCGTGACCTGGTGGGCTTCGACCAGTTCAAGGAAGTGCAGCGCGTGCTGGCGAATTTCCTCGAACGGC < NC_002947/4639263‑4639117 GCCCGGGATTTTCAGGCCACGCTGCACGGCTGGCGGTTCGAGGAAATTCGCCAGCACGGTCTTCACTTCCTTGAACTGGTCGAAGCCCACCAGGTCACGGGCGTTGTAGCGCTCCACCAGGTTACGCACCCAAGGGAAGATGGCGATGT < 7:260661/149‑1GCCCGGGATTTTCAGGCCACGCTGCACGGCTGGCCGTTCGAGGAAATTCGCCAGCACGCGCTGCACTTCCTTGAACTGGTCGAAGCCAACCAGGTCACGGGCGTTGTAGCGCTCCACCAGGTTACGCACCCAAGGGAAGATGGCGATG > 8:113786/1‑148 CCCGGGATTTTCAGGCCACGCTGCACGGCTGGCCGTTCGAGGAAATTCGCCAGCACGCGCTGCACTTCCTTGAACTGGTCGAAGCCCACCAGGTCACGGGCGTTGTAGCGCTCCACCAGGTTACGCACCCAAGGGAAGATGGCGATGTC > 8:224725/1‑149 CGGGATTTTCAGGCCACGCTGCACGGCTGGCCGTTCGAGGAAATTCGCCAGCACGCGCTGCACTTCCTTGAACTGGTCGAAGCCCACCAGGTCACGGGCGTTGTAGCGCTCCACCAGGTTACGCACCCAAGGGAAGATGGCGATGTCGG < 3:22842/149‑1 CGAGGAAATTCGCCAGCACGCGCTGCACTTCATTGAACTGGTCGAAGCCCACCAGGTCACGGGCGTTGTAGCGCTCCACCAGGTTACGCACCCAAGGGAAGATGGCGATGTCGGCAGTGGATGGCTGAGGAATACAGCATCGCCGACA < 1:276442/148‑1 AGGAAATTCGCCAGCACGCGCTGCACTTCCTTGAACTGGTCGAAGCCCACCAGGTCACGGGCGTTGTAGCGCTCCACCAGGTTACGCACCCAAGGGAAGATGGCGATGTCGGCAGTGGATGGCTGAGGAATACAGCATCGCCGACAT < 1:132614/147‑1 AGGAAATTCGCCAGCACGCGCTGCACTTCCTTGAACTGGTCGAAGCCCACCAGGTCACGGGCGTTGTAGCGCTCCACCAGGTTACGCACCCAAGGGAAGATGGCGATGTCGGCAGTGGATGGCTGAGGAATACAGCATCGCCGACAT > 2:132614/1‑147 GGCAGTGGATGGCTGAGGAATACAGCATCGCCGACATCGCCATCTTCCCTTGGGTGCGTAACCTGGTGGAGCGCTACAACGCCCGTGACCTGGTGGGCTTCGACCAGTTCAAGGAAGTGCAGCGCGTGCTGGCGAATTTCCTCGAACGG > 3:169123/1‑149 GCAGTGGATGGCTGAGGAATACAGCATCGCCGACATCGCCATCTTCCCTTGGGTGCGTAACCTGGTGGAGCGCTACAACGCCCGTGACCTGGTGGGCTTCGACCAGTTCAAGGAAGTGCAGCGCGTGCTGGCGAATTTCCTCGAACGGC > 7:20548/1‑149 GCCCGGGATTTTCAGGCCACGCTGCACGGCTGGCCGTTCGAGGAAATTCGCCAGCACGCGCTGCACTTCCTTGAACTGGTCGAAGCCCACCAGGTCACGGGCGTTGTAGCGCTCCACCAGGTTACGCACCCAAGGGAAGATGGCGATGTCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4639085‑4639237‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtcggcAGTGGATGGCTGAGGAATACAGCATCGCCGACATCGCCATCTTCCCTTGGGTGCGTAACCTGGTGGAGCGCTACAACGCCCGTGACCTGGTGGGCTTCGACCAGTTCAAGGAAGTGCAGCGCGTGCTGGCGAATTTCCTCGAACGGC < NC_002947/4639263‑4639117 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |