New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4639237	42 (0.860)	3 (0.060)	3/250	NT	7.1%	coding (541/696 nt)	PP_4104	glutathione S‑transferase family protein
	?	NC_002947	= 4639263	38 (0.810)					coding (515/696 nt)	PP_4104	glutathione S‑transferase family protein

GCCGTTCGAGGAAATTCGCCAGCACGCGCTGCACTTCCTTGAACT‑GGTCGAAGCCCACCAGGTCACGGGCGTTGTAGCGCTCCACCAGGTTACGCACCCAAGGGAAGATGGCGATGTCGGCGATGCTGTATTCCTCAGCCATCCACTGCCGACCTTTCAAATGCCGATCCAGCACGCCCAGCAGCCGCTTGGACTCGTTGACATAGCGGTCGCGCGGGCGCTTGTCTTCATATTCCTTGCCAGCAAAGAAATGGAAGAACCCGACCTGGCCGAACATCGGCCCGATGCCGCC  >  NC_002947/4639117‑4639408                                                                                                                                                    |                                                                                                                                                  gCCGTTCGAGGAAATTCGCCAGCACGCGCTGCACTTCCTTGAACT‑GGTCGAAGCCCACCAGGTCACGGGCGTTGTAGCGCTCCACCAGGTTACGCACCCAAGGGAAGATGGCGATGTCGGCGATGCTGTATTCCTCAGCCATCCACTgc                                                                                                                                                 >  7:20548‑M2/1‑147 (MQ=255)  ccGTTCGAGGAAATTCGCCAGCACGCGCTGCACTTCCTTGAACT‑GGTCGAAGCCCACCAGGTCACGGGCGTTGTAGCGCTCCACCAGGTTACGCACCCAAGGGAAGATGGCGATGTCGGCGATGCTGTATTCCTCAGCCATCCACTgcc                                                                                                                                                >  3:169123‑M2/1‑146 (MQ=255)       cGAGGAAATTCGCCAGCACGCGCTGCACTTCCTTGAACT‑GGTCGAAGCCCACCAGGTCACGGGCGTTGTAGCGCTCCACCAGGTTACGCACCCAAGGGAAGATGGCGATGTCGGCGATGCTGTATTCCTCAGCCATCCACTGCCGAcc                                                                                                                                            <  4:104097/148‑1 (MQ=255)         agtaaaTTCGCCAGCACGCGCTGCACTTCCTTGAACT‑GGTCGAAGCCCACCAGGTCACGGGCGTTGTAGCGCTCCACCAGGTTACGCACCCAAGGGAAGATGGCGATGTCGGCGATGCTGTATTCCTCAGCCATCCACTGCCGACCttt                                                                                                                                         >  2:308609/4‑149 (MQ=255)         aGGAAATTCGCCAGCACGCGCTGCACTTCCTTGAACT‑GGTCGAAGCCCACCAGGTCACGGGCGTTGTAGCGCTCCACCAGGTTACGCACCCAAGGGAAGATGGCGATGTCGGCGATGCTGTATTCCTCAGCCATCCACTGCCGACCttt                                                                                                                                         <  3:114376/149‑1 (MQ=255)           gAAATTCGCCAGCACGCGCTGCACTTCCTTGAACT‑GGTCGAAGCCCACCAGGTCACGGGCGTTGTAGCGCTCCACCAGGTTACGCACCCAAGGGAAGATGGCGATGTCGGCGATGCTGTATTCCTCAGCCATCCACTGCCGACCTTTCa                                                                                                                                       <  2:274467/149‑1 (MQ=255)              aTTCGCCAGCACGCGCTGCACTTCCTTGAACT‑GGTCGAAGCCCACCAGGTCACGGGCGTTGTAGCGCTCCACCAGGTTACGCACCCAAGGGAAGATGGCGATGTCGGCGATGCTGTATTCCTCAGCCATCCACTGCCGACCTTTCAAAt                                                                                                                                    <  1:152329/149‑1 (MQ=255)                   ccAGCACGCGCTGCACTTCCTTGAACTGGGTCGAAGCCCACCAGGTCACGGGCGTTGTAGCGCTCCACCAGGTTACGCACCAAAGGGAAGATGGCGATGTCGCCGATGATGTATTCCTCAGCCATCAACTGCCGACCTTTCAAATGcc                                                                                                                                 >  1:178947/1‑148 (MQ=255)                     aGCACGCGCTGCACTTCCTTGAACT‑GGTCGAAGCCCACCAGGTCACGGGCGTTGTAGCGCTCCACCAGGTTACGCACCCAAGGGAAGATGGCGATGTCGGCGATGCTGTATTCCTCAGCCATCCACTGCCGACCTTTCAAATGCCGATc                                                                                                                             >  6:313629/1‑149 (MQ=255)                     aGCACGCGCTGCACTTCCTTGAACT‑GGTCGAAGCCCACCAGGTCACGGGCGTTGTAGCGCTCCACCAGGTTACGCACCCAAGGGAAGATGGCGATGTCGGCGATGCTGTATTCCTCAGCCATCCACTGCCGACCTTTCAAATGCCGATc                                                                                                                             <  2:50260/149‑1 (MQ=255)                            gcTGCACTTCCTTGAACT‑GGTCGAAGCCCACCAGGTCACGGGCGTTATAGCGCTCCACCAGGTTACGCACCCAAGGGAAGATGGCGATGTCGGCGATGCTGTATTCCTCAGCCATCCACTGCCGACCTTTCAAATGCCGATCCacccc                                                                                                                       >  1:68179/1‑144 (MQ=255)                                      cTTGAACT‑GGTCGAAGCCCACCAGGTCACGGGCGTTGTAGCGCTCCACCAGGTTACGCACCCAAGGGAAGATGGCGATGTCGGCGATGCTGTATTCCTCAGCCATCCACTGCCGACCTTTCAAATGCCGATCCAGCACGCCCagcagc                                                                                                             <  7:224725/148‑1 (MQ=255)                                       ttGAACT‑GGTCGAAGCCCACCAGGTCACGGGCGTTGTAGCGCTCCACCAGGTTACGCACCCAAGGGAAGATGGCGATGTCGGCGATGCTGTATTCCTCAGCCATCCACTGCCGACCTTTCAAATGCCGATCCAGCACGCCCAGCAGCCg                                                                                                           >  3:111942/1‑149 (MQ=255)                                           aCT‑GGTCGAAGCCGACCAGGTCACGGGCGTTGTAGCGCTCCACGAGGTTACGCACCCAAGGGAATATGGCCTTGTCGGCGATGCTGTATTCCTCAGCCATCCACTGCCGACCTTTCAAATGCCGATCCAGCACGCCCAGCAGCCGCTTg                                                                                                       <  7:113786/149‑1 (MQ=255)                                                  cGAAGCCCACCAGGTCACGGGCGTTGTAGCGCTCCACCAGGTTACGCACCCAAGGGAAGATGGCGATGTCGGCGATGCTGTATTCCTCAGCCATCCACTGCCGACCTTTCAAATGCCGATCCAGCACGCCCAGCAGCCGCTTGGACTCg                                                                                                 >  8:198820/1‑149 (MQ=255)                                                  cGAAGCCCACCAGGTCACGGGCGTTGTAGCGCTCCACCAGGTTACGCACCCAAGGGAAGATGGCGATGTCGGCGATGCTGTATTCCTCAGCCATCCACTGCCGACCTTTCAAATGCCGATCCAGCACGCCCAGCAGCCGCTTGGACTCg                                                                                                 >  4:20060/1‑149 (MQ=255)                                                   gAAGCCCACCAGGTCACGGGCGTTGTAGCGCTCCACCAGGTTACGCACCCAAGGGAAGATGGCGATGTCGGCGATGCTGTATTCCTCAGCCATCCACTGCCGACCTTTCAAATGCCGa                                                                                                                               >  6:259017/1‑118 (MQ=255)                                                   gAAGCCCACCAGGTCACGGGCGTTGTAGCGCTCCACCAGGTTACGCACCCAAGGGAAGATGGCGATGTCGGCGATGCTGTATTCCTCAGCCATCCACTGCCGACCTTTCAAATGCCGa                                                                                                                               <  5:259017/118‑1 (MQ=255)                                                   gAAGCCCACCAGGTCACGGGCGTTGTAGCGCTCCACCAGGTTACGCACCCAAGGGAAGATGGCGATGTCGGCGATGCTGTATTCCTCAGCCATCCACTGCCGACCTTTCAAATGCCGATCCAGCACGCCCAGCAGCCGCTTGGACTCg                                                                                                 <  5:313629/148‑1 (MQ=255)                                                           ccaGGTCACGGGCGTTGTAGCGCTCCACCAGGTTACGCACCCAAGGGAAGATGGCGATGTCGGCGATGCTGTATTCCTCAGCCATCCACTGCCGACCTTTCAAATGCCGATCCAGCACGCCCAGCAGCCGCTTGGACTCGTTGACATAg                                                                                        <  2:293432/149‑1 (MQ=255)                                                               gTCACGTGCGTTGTAGCGCTCCACCAGGTTACGCACCCAAGGGAAGATGGCGATGTCGGCGATGCTGTATTCCTCAGCCATCCACTGCCGACCTTTCAAATGCCGATCCAGCACGCCCAGCAGCCGCTTGGACTCGTTGACATAGCGGt                                                                                    <  4:211133/149‑1 (MQ=255)                                                                    gggCGTTGTAGCGCTCCACCAGGTTACGCACCCAAGGGAAGATGGCGATGTCGGCGATGCTGTATTCCTCAGCCATCCACTGCCGACCTTTCAAATGCCGATCCAGCACGCCCAGCAGCCGCTTGGACTCGTTGACATAGCGGTcgcgc                                                                               >  1:281290/1‑149 (MQ=255)                                                                      gCGTTGTAGCGCTCCACCAGGTTACGCACCCAAGGGAAGATGGCGATGTCGGCGATGCTGTATTCCTCAGCCATCCACTGCCGACCTTTCAAATGCCGATCCAGCACGCCCAGCAGCCGCTTGGACTCGTTGACATAGCGGTCGCGCgg                                                                             <  2:281290/149‑1 (MQ=255)                                                                            tAGCGCTCCACCAGGTTACGCACCCAAGGGAAGATGGCGATGTCGGCGATGCTGTATTCCTCAGCCATCCACTGCCGACCTTTCAAATGCCGATCCAGCACGCCCAGCAGCCGCTTGGACTCGTTGACATAGCGGTCGCGCGGGCGCtt                                                                       <  7:198820/149‑1 (MQ=255)                                                                            tAGCGCTCCACCAGGTTACGCACCCAAGGGAAGATGGCGATGTCGGCGATGCTGTATTCCTCAGCCATCCACTGCCGACCTTTCAAATGCCGATCCAGCACGCCCAGCAGCCGCTTGGACTCGTTGACATAGCGGTCGCGCGGGCGCtt                                                                       <  3:20060/149‑1 (MQ=255)                                                                            aatcgcTCCACCAGGATACCCCCCCAACGTAAGATGGCGATGGCGCCGATGCTGTATTCCTCAGCCATCCACTGCCGACCTTTCAATTGCCGCTCCAGCACGCCCAGCAGCCGCTTGGACTCGTTGACATAGCGGTCGCGCGGGCGCtt                                                                       <  8:202203/146‑1 (MQ=255)                                                                             aGCGCTCCACCAGGTTACGCACCCAAGGGAAGATGGCGATGTCGGCGATGCTGTATTCCTCAGCCATCCACTGCCGACCTTTCAAATGCCGATCCAGCACGCCCAGCAGCCGCTTGGACTCGTTGACATa                                                                                         <  5:301395/130‑1 (MQ=255)                                                                             aGCGCTCCACCAGGTTACGCACCCAAGGGAAGATGGCGATGTCGGCGATGCTGTATTCCTCAGCCATCCACTGCCGACCTTTCAAATGCCGATCCAGCACGCCCAGCAGCCGCTTGGACTCGTTGACATa                                                                                         >  6:301395/1‑130 (MQ=255)                                                                                 cTCCACCAGGTTACGCACCCAAGGGAAGATGGCGATGTCGGCGATGCTGTATTCCTCAGCCATCCACTGCCGACCTTTCAAATGCCGATCCAGCACGCCCAGCAGCCGCTTGGACTCGTTGACATAGCGGTCGCGCgg                                                                             >  3:223358/1‑138 (MQ=255)                                                                                 cTCCACCAGGTTACGCACCCAAGGGAAGATGGCGATGTCGGCGATGCTGTATTCCTCAGCCATCCACTGCCGACCTTTCAAATGCCGATCCAGCACGCCCAGCAGCCGCTTGGACTCGTTGACATAGCGGTCGCGCgg                                                                             <  4:223358/138‑1 (MQ=255)                                                                                               gCACCCAAGGGAAGATGGCGATGTCGGCGATGCTGTATTCCTCAGCCATCCACTGCCGACCTTTCAAATGCCGATCCAGCACGCCCAGCAGCCGCTTGGACTCGTTGACATAGCGGTCGCGCGGGCGCTTGTCTTCATATTCCTTGc                                                      >  2:45698/1‑147 (MQ=255)                                                                                               gCACCCAAGGGAAGATGGCGATGTCGGCGATGCTGTATTCCTCAGCCATCCACTGCCGACCTTTCAAATGCCGATCCAGCACGCCCAGCAGCCGCTTGGACTCGTTGACATAGCGGTCGCGCGGGCGCTTGTCTTCATATTCCTTGc                                                      <  1:45698/147‑1 (MQ=255)                                                                                               gCACCCAAGGGAAGATGGCGATGTCGGCGATGCTGTATTCCTCAGCCATCCACTGCCGACCTTTCAAATGCCGATCCAGCACGCCCAGCAGCCGCTTGGACTCGTTGACATAGCGGTCGCGCGGGCGCTTGTCTTCATATTCCTTGc                                                      >  5:55706/1‑147 (MQ=255)                                                                                                 aCCCAAGGGAAGATGGCGATGTCGGCGATGCTGTATTCCTCAGCCATCCACTGCCGACCTTTCAAATGCCGATCCAGCACGCCCAGCAGCCGCTTGGACTCGTTGACATAGCGGTCGCGCGGGCGCTTGTCTTCATATTCCTTGCCAg                                                   >  2:150296/1‑148 (MQ=255)                                                                                                     aaGGGAAGATGGCGATGTCGGCGATGCTGTATTCCTCAGCCATCCACTGCCGACCTTTCAAATGCCGATCCAGCACGCCCAGCAGCCGCTTGGACTCGTTGACATAGCGGTCGCGCGGGCGCTTGTCTTCATATTCCTTGCCAGCa                                                 >  6:50884/1‑146 (MQ=255)                                                                                                        ggAAGATGGCGATGTCGGCGATGCTGTATTCCTCAGCCATCCACTGCCGACCTTTCAAATGCCGATCCAGCACGCCCAGCAGCCGCTTGGACTCGTTGACATAGCGGTCGCGCGGGCGCTTGTCTTCATATTCCTTGCCAGCAAAGaaa                                           <  2:178947/149‑1 (MQ=255)                                                                                                                   aTGTCGGCGATGCTGTATTCCTCAGCCATCCACTgccgacatcgccatcttcccttgggtgcgtaacctggtggagcgctacaacgcccgtgacctggtgggcttcgaccagttcaaggaagtgcagcgcgtgctggcgaatttcct                                  >  2:132614‑M2/1‑34 (MQ=255)                                                                                                                   aTGTCGGCGATGCTGTATTCCTCAGCCATCCACTgccgacatcgccatcttcccttgggtgcgtaacctggtggagcgctacaacgcccgtgacctggtgggcttcgaccagttcaaggaagtgcagcgcgtgctggcgaatttcct                                  <  1:132614‑M2/147‑114 (MQ=255)                                                                                                                    tGTCGGCGATGCTGTATTCCTCAGCCATCCACTgccgacatcgccatcttcccttgggtgcgtaacctggtggagcgctacaacgcccgtgacctggtgggcttcgaccagttcaatgaagtgcagcgcgtgctggcgaatttcctcg                                <  1:276442‑M2/148‑116 (MQ=255)                                                                                                                      tCGGCGATGCTGTATTCCTCAGCCATCCACTGCCGACCTTTCAAATGCCGATCCAGCACGCCCAGCAGCCGCTTGGACTCGTTGACATAGCGGTCGCGCGGGCGCTTGTCTTCATATTCCTTGCCAGCAAAGAAATGGAAGAACCCGAc                             >  2:16061/1‑149 (MQ=255)                                                                                                                      tCGGCGATGCTGTATTCCTCAGCCATCCACTGCCGACCTTTCAAATGCCGATCCAGCACGCCCAGCAGCCGCTTGGACTCGTTGACATAGCGGTCGCGCGGGCGCTTGTCTTCATATTCCTTGCCAGCAAAGAAATGGAAGAACCCGAc                             <  5:50884/149‑1 (MQ=255)                                                                                                                        ggCGATGCTGTATTCCTCAGCCATCCACTGCCGACCTTTCAAATGCCGATCCAGCACGCCCAGCAGCCGCTTGGACTCGTTGACATAGCAGTCGCGCGGGCGCTTGTCTTCATATTCCTTGCCAGCAAAg                                              <  4:149177/130‑1 (MQ=255)                                                                                                                        ggCGATGCTGTATTCCTCAGCCATCCACTGCCGACCTTTCAAATGCCGATCCAGCACGCCCAGCAGCCGCTTGGACTCGTTGACATAGCAGTCGCGCGGGCGCTTGTCTTCATATTCCTTGCCAGCAAAg                                              >  3:149177/1‑130 (MQ=255)                                                                                                                                 gTATTCCTCAGCCATCCACTGCCGACCTTTCAAATGCCGATCCAGCACGCCCAGCAGCCGCTTGGACTCGTTGACATAGCGGTCGCGCGGGCGCTTGTCTTCATATTCCTTGCCAGCAAAGAAATGGAAGAACCCGACCTGGCCGAAc                   >  8:233564/1‑148 (MQ=255)                                                                                                                                       cTCAGCCATCCACTGCCGACCTTTCAAATGCCGATCCAGCACGCCCAGCAGCCGCTTGGACTCGTTGACATAGCGGTCGCGCGGGCGCTTGTCTTCATATTCCTTGCCAGCAAAGAAATGGAAGAACCCGACCTGGCCGAACATCGGc             <  6:55706/148‑1 (MQ=255)                                                                                                                                           gCCATCCACTGCCGACCTTTCAAATGCCGATCCAGCACGCCCAGCAGCCGCTTGGACTCGTTGACATAGCGGTCGCGCGGGCGCTTGTCTTCATATTCCTTGCCAGCAAAGAAATGGAAGAACCCGACCTGGCCGAACATCGGCCCGAt        <  7:233564/149‑1 (MQ=255)                                                                                                                                                 cACTGCCGACCTTTCAAATGCCGATCCAGCACGCCCAGCAGCCGCTTGGACTCGTTGACATAGCGGTCGCGCGGGCGCTTGTCTTCATATTCCTTGCCAGCAAAGAAATGGAAGAACCCGAcc                            <  6:201794/123‑1 (MQ=255)                                                                                                                                                  aCTGCCGACCTTTCAAATGCCGATCCAGCACGCCCAGCAGCCGCTTGGACTCGTTGACATAGCGGTCGCGCGGGCGCTTGTCTTCATATTCCTTg                                                       <  8:227749/95‑1 (MQ=255)                                                                                                                                                  aCTGCCGACCTTTCAAATACCGATCCAGCACGCCCAGCAGCCGCTTGGACTCGTTGACATAGCGGTCGCGCGGGCGCTTGTCTTCATATTCCTTGCCAGCAAAGAAATGGAAGAACCCGACCTGGCCGAACATCGGCCCGATgccgcc  >  6:195499/1‑148 (MQ=255)                                                                                                                                                    |                                                                                                                                                  GCCGTTCGAGGAAATTCGCCAGCACGCGCTGCACTTCCTTGAACT‑GGTCGAAGCCCACCAGGTCACGGGCGTTGTAGCGCTCCACCAGGTTACGCACCCAAGGGAAGATGGCGATGTCGGCGATGCTGTATTCCTCAGCCATCCACTGCCGACCTTTCAAATGCCGATCCAGCACGCCCAGCAGCCGCTTGGACTCGTTGACATAGCGGTCGCGCGGGCGCTTGTCTTCATATTCCTTGCCAGCAAAGAAATGGAAGAACCCGACCTGGCCGAACATCGGCCCGATGCCGCC  >  NC_002947/4639117‑4639408

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.