New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 4845323 = | 50 (1.020) | 3 (0.070) | 3/246 | NT | 6.2% | coding (73/2475 nt) | PP_4261 | cation‑transporting P‑type ATPase |
? | NC_002947 | 4845374 = | 44 (0.960) | coding (124/2475 nt) | PP_4261 | cation‑transporting P‑type ATPase |
AGGGCCAGTTCGTCCTGTAGTTGTTTGGGCAGGGCTTCGGGGTTGGCGCTGTTGTCGCTGCGGTGTTGGTAGTAATGTTCCAGGCCTCCAGCGACGATCGACTCGGCCACCGCCTGACAGCCGGGGCAGCAGAACTGCCGGGGCTGGCCGAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4845474‑4845323 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggccgagTCGATCGTCGCTGGAGGCCTGGAACATTACTACCAACACCGCAGCGACAACAGCGCCAACCCCGAAGCCCTGCCCAAACAACTACAGGACGAACTGGCCCTGTACGACCGCAGCGACGTGCAGCAAACCTTCGTCCGCCACCAGG > NC_002947/4845374‑4845518 AGGGCCAGTTCGTCCTGTAGTTGTTTGGGCAGGGCTTCGGGGTTGGCGCTGTTGTCGCTGCGGTGTTGGTAGTAATGTTCCAGGCCTCCAGCGACGATCGACTCGGCCACCGCCTGACAGCCGGGGCAGCAGAACTGCCGGGGCTGGCC > 4:234306/1‑149 GGCCAGTTCGTCCTGTAGTTGTTTGGGCAGGGCTTCGGGGTTGGCGCTGTTGTCGCTGCGGTGTTGGTAGTAATGTTCCAGGCCTCCAGCGACGATCGACTCGGCCACCGCCTGACAGCCGGGGCAGCAGAACTGCCGGGGCTGGCCGA < 1:177347/149‑1 TCGACTCGGCCACCGCCTGACAGCCGGGGCAGCAGAACTGCCGGGGCTGGCCGAGTCGATCGTCGCTGGAGGCCTGGAACATTA > 1:167091/1‑84 TCGACTCGGCCACCGCCTGACAGCCGGGGCAGCAGAACTGCCGGGGCTGGCCGAGTCGATCGTCGCTGGAGGCCTGGAACATTA < 2:167091/84‑1 CTCGGCCACCGCCTGACAGCCGGGGCAGCAGAACTGCCGGGGCTGGCCGAGTCGATCGTCGCTGGAGGCCTGGAACATTACTACCAACACCGCAGCGCCAACAGCGCCAACCCCGAAGCCCTGCCCAAACAACTACAGGACGAACTGGC > 7:291925/1‑149 CGAGTCGATCGTCGCTGGAGGCCTGGAACATTACTACCAACACCGCAGCGACAACAGCGCCAACCCCGAAGCCCTGCCCAAACAACTACAGGACGAACTGGCCCTGTACGACCGCAGCGACGTGCAGCAAACCTTCGTCCGCCACCAGG < 5:125223/149‑1 CGAGTCGATCGTCGCTGGAGGCCTGGAACATTACTACCAACACCGCAGCGACAACAGCGCCAACCCCGAAGCCCTGCCCAAACAACTACAGGACGAACTGGCCCTGTACGACCGCAGCGACGTGCAGCAAACCTTCGTCCGCCACCAGG < 6:139580/149‑1 AGGGCCAGTTCGTCCTGTAGTTGTTTGGGCAGGGCTTCGGGGTTGGCGCTGTTGTCGCTGCGGTGTTGGTAGTAATGTTCCAGGCCTCCAGCGACGATCGACTCGGCCACCGCCTGACAGCCGGGGCAGCAGAACTGCCGGGGCTGGCCGAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4845474‑4845323 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggccgagTCGATCGTCGCTGGAGGCCTGGAACATTACTACCAACACCGCAGCGACAACAGCGCCAACCCCGAAGCCCTGCCCAAACAACTACAGGACGAACTGGCCCTGTACGACCGCAGCGACGTGCAGCAAACCTTCGTCCGCCACCAGG > NC_002947/4845374‑4845518 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |