New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4845323 =	50 (1.020)	3 (0.070)	3/246	NT	6.2%	coding (73/2475 nt)	PP_4261	cation‑transporting P‑type ATPase
	?	NC_002947	4845374 =	44 (0.960)					coding (124/2475 nt)	PP_4261	cation‑transporting P‑type ATPase

TTCCAGGTCTGACGCATTCGCGGGCGCGCCCGCTCCCACAGGGTTTCCTATCTGCCTGAGCAGTGTCTGCCCTATGACCCAACCGACCCCCTGCTACCACTGCGCCCTGCCCGTCCCCACCGGCAGCCGCTTCACCGCCGTGGTCCTCGGCCAGCCCCGGCAGTTCTGCTGCCCCGGCTGTCAGGCGGTGGCCGAGTCGATCGTCGCTGGAGGCCTGGAACATTACTACCAACACCGCAGCGACAACAGCGCCAACCCCGAAGCCCTGCCCAAACAACTACAG  >  NC_002947/4845178‑4845460                                                                                                                                                  |                                                                                                                                          ttCCAGGTCTGACGCATTCGCGGGCGCGCCCGCTCCCACAGGGTTTCCTATCTGCCTGAGCAGTGTCTGCCCTATGACCCAACCGACCCCCTGCTACCACTGCGCCCTGCCCGTCCCCACCGGCAGCCGCTTCACCGCCGTGGTCCTCg                                                                                                                                        >  8:291546/1‑149 (MQ=255) cctggtggcggacgaaggtttgctgcacgtcgctgcggtcgtacagggccagttcgtcctgtagttgtttgggcagggcttcggggttggcgctgttgtcgctgcggtgttggtagtaatgttccaggcctccagcgacgatcgaCTCg                                                                                                                                        <  5:125223‑M1/4‑1 (MQ=255) cctggtggcggacgaaggtttgctgcacgtcgctgcggtcgtacagggccagttcgtcctgtagttgtttgggcagggcttcggggttggcgctgttgtcgctgcggtgttggtagtaatgttccaggcctccagcgacgatcgaCTCg                                                                                                                                        <  6:139580‑M1/4‑1 (MQ=255)                aTTCGCGGGCGTGCCCGCTCCCACAGGGTTTCCTATCTGCCTGAGCAGTGTCTGCCCTATGACCCAACCGACCCCCTGCTACCACTGCGCCCTGCCCGTCCCCACCGGCAGCCGCTTCACCGCCGTGGTCCTCGGCCAGCCCCGGCAGt                                                                                                                         <  7:243113/149‑1 (MQ=255)                aTTCGCGGGCGCGCCCGCTCCCACAGGGTTTCCTATCTGCCTGAGCAGTGTCTGCCCTATGACCCAACCGACCCCCTGCTACCACTGCGCCCTGCCCGTCCCCACCGGCAGCCGCTTCACCGCCGTGGTCCTCGGCCAGCCCCGGCAGt                                                                                                                         >  2:22543/1‑149 (MQ=255)                        gcgcgcCCGCTCCCACAGGGTTTCCTATCTGCCTGAGCAGTGTCTGCCCTATGACCCAACCGACCCCCTGCTACCACTGCGCCCTGCCCGTCCCCACCGGCAGCCGCTTCACCGCCGTGGTCCTCGGCCAGCCCCGGCAGTTCtgctgc                                                                                                                 >  8:180770/1‑149 (MQ=255)                               cGCTCCCACAGGGTTTCCTATCTGCCTGAGCAGTGTCTGCCCTATGACCCAACCGACCCCCTGCTACCACTGCGCCCTGCCCGTCCCCACCGGCAGCCGCTTCACCGCCGTGGTCCTCGGCCAGCCCCGGCAGTTCTGCTGCCCCGGCt                                                                                                          <  5:264218/149‑1 (MQ=255)                                 cTCCCACAGGGTTTCCTATCTGCCTGAGCAGTGTCTGCCCTATGACCCAACCGACCCCCTGCTACCACTGCGCCCTGCCCGTCCCCACCGGCAGCCGCTTCACCGCCGTGGTCCTCGGCCAGCCCCGGCAGTTCTGCTGCCCCGGCTGt                                                                                                        >  7:125351/1‑149 (MQ=255)                                    ccACAGGGTTTCCTATCTGCCTGAGCAGTGTCTGCCCTATGACCCAACCGACCCCCTGCTACCACTGCGCCCTGCCCGTCCCCACCGGCAGCCGCTTCACCGCCGTGGTCCTCGGCCAGCCCCGGCAGTTCTGCTGCCCCGGCTGTc                                                                                                       <  8:84916/147‑1 (MQ=255)                                     cacaGGGTTTCCTATCTGCCTGAGCAGTGTCTGCCCTATGACCCAACCGACCCCCTGCTACCACTGCGCCCTGCCCGTCCCCACCGGCAGCCGCTTCACCGCCGTGGTCCTCGGCCAGCGCCGGCAGTTCTGCTGCCCCGGCTGTCAgg                                                                                                    >  5:272823/1‑149 (MQ=255)                                     cacaGGGTTTCCTATCTGCCTGAGCAGTGTCTGCCCTATGACCCAACCGACCCCCTGCTACCACTGCGCCCTGCCCGTCCCCACCGGCAGCCGCTTCACCGCCGTGGTCCTCGGCCAGCCCCGGCAGtt                                                                                                                        <  6:175700/129‑1 (MQ=255)                                     cacaGGGTTTCCTATCTGCCTGAGCAGTGTCTGCCCTATGACCCAACCGACCCCCTGCTACCACTGCGCCCTGCCCGTCCCCACCGGCAGCCGCTTCACCGCCGTGGTCCTCGGCCAGCCCCGGCAGtt                                                                                                                        >  5:175700/1‑129 (MQ=255)                                     cacaGGGTTTCCTATCTGCCTGAGCAGTGTCTGCCCTATGACCCAACCGACCCCCTGCTACCACTGCGCCCTGCCCGTCCCCACCGGCAGCCGCTTCACCGCCGTGGTCCTCGGCCAGCCCCGGCAGTTctg                                                                                                                     <  7:284648/132‑1 (MQ=255)                                     cacaGGGTTTCCTATCTGCCTGAGCAGTGTCTGCCCTATGACCCAACCGACCCCCTGCTACCACTGCGCCCTGCCCGTCCCCACCGGCAGCCGCTTCACCGCCGTGGTCCTCGGCCAGCCCCGGCAGTTctg                                                                                                                     >  8:284648/1‑132 (MQ=255)                                       caGGGTTTCCTATCTGCCTGAGCAGTGTCTGCCCTATGACCCACCCGACCCCCTGCTACCACTGCGCCCTGCCCGTCCCCACCGGCAGCCGCTTCACCGCCGTGGTCCTCGGCCAGCCCCGGCAGTTCTGCTGCCCCGGCTGTCAGGCg                                                                                                  <  3:200395/149‑1 (MQ=255)                                                gccagttcgtcctgtagttgtttgggcagggcttcggggttggcgctgttggcgctgcggtgttggtagtaatgttccaggcctccagcgacgatcgaCTCGGCCAGCCCCGGCAGTTCTGCTGCCCCGGCTGTCAGGCGGTGGCCGAg                                                                                         >  7:291925‑M1/99‑149 (MQ=255)                                                cTATCTGCCTGAGCAGTGTCTGCCCTATGACCCAACCGACCCCCTGCTACCACTGCGCCCTGCCCGTCCCCACCGGCAGCCGCTTCACCGCCGTGGTCCTCGGCCAGCCCCGGCAGTTCTGCTGCCCCGGCTGTCAGGCGGTGGCCGAg                                                                                         >  2:221878/1‑149 (MQ=255)                                                      gCCTGAGCAGTGTCTGCCCTATGACCCAACCGACCCCCTGCTACCACAGCGCCCTGCCCGTCCCCACCGGCAGCCGCTTCACCGCCGTGGTCCTCGGCCAGCCCCCGCAGTTCTGCTGCCCCGGCTGACAGGCGGTGGCCGAGTCGAtc                                                                                   >  1:2246/1‑149 (MQ=255)                                                       ccTGAGCAGTGTCTGCCCTATGACCCAACCGACCCCCTGCTACCACTGCGCCCTGCCCGTCCCCACCGGCAGCCGCTTCACCGCCGTGGTCCTCGGCCAGCCCCGGCAGTTCTGCTGCCCCGGCTGTCAGGCGGTGGCCGAGTCGAtcg                                                                                  >  8:40086/1‑149 (MQ=255)                                                        cTGAGCAGTGTCTGCCCTATGACCCAACCGACCCCCTGCTACCACTGCGCCCTGCCCGTCCCCACCGGCAGCCGCTTCACCGCCGTGGTCCTCGGCCAGCCCCGGCAGTTCTGCTGCCCCGGCTGTCAGGCGGTGGCCGAGTCGAtcgt                                                                                 <  8:125351/149‑1 (MQ=255)                                                         tGAGCAGTGTCTGCCCTATGACCCAACCGACCCCCTGCTACCACTGCGCCCTGCCCGTCCCCACCGGCAGCCGCTTCACCGCCGTGGTCCTCGGCCAGCCCCGGCAGTTCTGCTGCCCCGGCTGTCAGGCGGTGGCCGAGTCGAtcgtc                                                                                >  2:297856/1‑149 (MQ=255)                                                           aGCAGTGTCTGCCCTATGACCCAACCGACCCCCTGCTACCACTGCGCCCTGCCCGTCCCCACCGGCAGCCGCTTCACCGCCGTGGTCCTCGGCCAGCCCCGGCAGTTCTGCTGCCCCGGCTGTCAGGCGGTGGCCGAGTCGAtcgtcg                                                                               <  4:300929/148‑1 (MQ=255)                                                                tgtCTGCCCTATGACCCAACCGACCCCCTGCTACCACTGCGCCCTGCCCGTCCCCACCGGCAGCCGCTTCACCGCCGTGGTCCTCGGCCAGCCCCGGCAGTTCTGCTGCCCCGGCTGTCAGGCGGTGGCCGAGTCGATCGTCGCTGGAg                                                                         <  1:221878/149‑1 (MQ=255)                                                                tgtCTGCCCTAGGACCCAACCGACCCCCTGCTACCACTGCGCCCTGCCCGTCCCCACCGGCAGCCGCTTCACCGCCGTGGTCCTCGGCCAGCCCCGGCAGTTCTGCTGCCCCGGCTGTCAGGCGGTGGCCGAGTCGATCGTCGCTGGAg                                                                         <  6:142417/149‑1 (MQ=255)                                                                 gtCTGCCCTATGACCCAACCGACCCCCTGCTACCACTGCGCCCTGCCCGTCCCCACCGGCAGCCGCTTCACCGCCGTGGTCATCGGCCAGCCCCGGCAGTTCTGCTGCCCCGGCTGTCAGGCGGTGGCCGAGTCGATCGTCGCTGGAgg                                                                        >  2:254833/1‑149 (MQ=255)                                                                    tGCCCTATGACCCAACCGACCCCCTGCTACCACTGCGCCCTGCCCGTCCCCACCGGCAGCCGCTTCACCGCCGTGGTCCTCGGCCAGCCCCGGCAGTTCTGCTGCCCCGGCTGTCAGGCGGTGGCCGAGTCGATCGTCGCTGGAGGCCt                                                                     >  1:203875/1‑149 (MQ=255)                                                                    tGCCCTATGACCCAACCGACCCCCTGCTACCACTGCGCCCTGCCCGTCCCCACCGGCAGCCGCTTCACCGCCGTGGTCCTCGGCCAGCCCCGCCAGTTCTGCTGCCCCGGCTGTCAGGCGGTGGCCGAGTCGATCGTCGCTGGAGGCCt                                                                     >  5:139580/1‑149 (MQ=255)                                                                      cccTATGACCCAACCGACCCCCTGCTACCACTGCGCCCTGCCCGTCCCCACCGGCAGCCGCTTCACCGCCGTGGTCCTCGGCCAGCCCCGGCAGTTCTGCTGCCCCGGCTGTCAGGCGGTGGCCGAGTCGATCGTCGCTGGAGGCCt                                                                     <  2:203875/147‑1 (MQ=255)                                                                      cccTATGACCCAACCGACCCCCTGCTACCACTGCGCCCTGCCCGTCCCCACCGGCAGCCGCTTCACCGCCGTGGTCCTCGGCCAGCCCCGGCAGTTCTGCTGCCCCGGCTGTCAGGCGGTGGCCGAGTCGATCGTCGCTGGAGGCCTg                                                                    >  2:140167/1‑148 (MQ=255)                                                                              cccAACCGACCCCCTGCTACCACTGCGCCCTGCCCGTCCCCACCGGCAGCCGCTTCACCGCCGTGGTCCTCGGCCAGCCCCGGCAGTTCTGCTGCCCCGGCTGTCAGGCGGTGGCCGAGTCGATCGTCGCTGGAGGCCTgg                                                                   <  4:216863/141‑1 (MQ=255)                                                                              cccAACCGACCCCCTGCTACCACTGCGCCCTGCCCGTCCCCACCGGCAGCCGCTTCACCGCCGTGGTCCTCGGCCAGCCCCGGCAGTTCTGCTGCCCCGGCTGTCAGGCGGTGGCCGAGTCGATCGTCGCTGGAGGCCTGGAACATtac                                                           <  1:140167/149‑1 (MQ=255)                                                                              cccAACCGACCCCCTGCTACCACTGCGCCCTGCCCGTCCCCACCGGCAGCCGCTTCACCGCCGTGGTCCTCGGCCAGCCCCGGCAGTTCTGCTGCCCCGGCTGTCAGGCGGTGGCCGAGTCGATCGTCGCTGGAGGCCTGGAACATtac                                                           >  3:220/1‑149 (MQ=255)                                                                              cccAACCGACCCCCTGCTACCACTGCGCCCTGCCCGTCCCCACCGGCAGCCGCTTCACCGCCGTGGTCCTCGGCCAGCCCCGGCAGTTCTGCTGCCCCGGCTGTCAGGCGGTGGCCGAGTCGATCGTCGCTGGAGGCCTGGAACATtac                                                           >  1:194887/1‑149 (MQ=255)                                                                              cccAACCGACCCCCTGCTACCACTGCGCCCTGCCCGTCCCCACCGGCAGCCGCTTCACCGCCGTGGTCCTCGGCCAGCCCCGGCAGTTCTGCTGACCCGGCTGTCAGGCGGTGGCCGAGTCGATCGTCGCTGGAGGCCTgg                                                                   >  3:216863/1‑141 (MQ=255)                                                                                cAACCGACCCCCTGCTACCACTGCGCCCTGCCCGTCCCCACCGGCAGCCGCTTCACCGCCGTGGTCCTCGGCCAGCCCCGGCAGTTCTGCTGCCCCGGCTGTCAGGCGGTGGCCGAGTCGATCGTCGCTGGAGGCCTGGAACATtacta                                                         >  3:234306/1‑149 (MQ=255)                                                                                cAACCGACCCCCTGCTACCACTGCGCCCTGCCCGTCCCCACCGGCAGCCGCTTCACCGCCGTGGTCCTCGGCCAGCCCCGGCAGTTCTGCTGCCCCGGCTGTCAGGCGGTGGCCGAGTCGATCGTCGCTGGAGGCCTGGAACATtacta                                                         >  7:3061/1‑149 (MQ=255)                                                                                 aaCCGACCCCCTGCTACCACTGCGCCCTGCCCGTCCCCACCGGCAGCCGCTTCACCGCCGTGGTCCTCGGCCAGCCCCGGCAGTTCTGCTGCCCCGGCTGTCAGGCGGTGGCCGAGTCGATCGTCGCTGGAGGCCTGGAACATtactac                                                        <  2:194887/149‑1 (MQ=255)                                                                                     gACCCCCTGCTACCACTGCGCCCTGCCCGTCCCCACCGGCAGCCGCTTCACCGCCGTGGTCCTCGGCCAGCCCCGGCAGTTCTGCTGCCCCGGCTGTCAGGCGGTGGCCGAGTCGATCGTCGCTGGAGGCCTGGAACATTACTACCAac                                                    <  8:3061/149‑1 (MQ=255)                                                                                              cTACCACTGCGCCCTGCCCGTCCCCACCGGCAGCCGCTTCACCGCCGTGGTCATCGGCCAGCCCCGGCAGTTCTGCTGCCCCGGCTGTCAGGCGGTGGCCGAGTCGATCGTCGCTGGAGGCCTGGAACATTACTACCAACACCGCAg                                             <  1:254833/147‑1 (MQ=255)                                                                                                  cACTGCGCCCTGCCCGTCCCCACCGGCAGCCGCTTCACCGCCGTGGTCCTCGGCCAGCCCCGGCAGTTCTGCTGCCCCGGCTGTCAGGCGGTGGCCGAGTCGATCGTCGCTGGAGGCCTGGAACATTACTACCAACACCGCAGCGacaa                                       <  4:220/149‑1 (MQ=255)                                                                                                                  tCCCCACCGGCAGCCGCTTCACCGCCGTGGTCCTCGGCCAGCCCCGGCAGTTCTGCTGCCCCGGCTGTCAGGCGGTGGCCGAGTCGATCGTCGCTGGAGGCCTGGAACATTACTACCAACACCGCAGCGACAACAGCGCCAACCCCGaa                       <  1:297856/149‑1 (MQ=255)                                                                                                                    cccACCGGCAGCCGCTTCACCGCCGTGGTCCTCGGCCAGCCCCGGCAGTTCTGCTGCCCCGGCTGTCAGGCGGTGGCCGAGTCGATCGTCGCTGGAGGCCTGGAACATta                                                            >  2:91146/1‑110 (MQ=255)                                                                                                                    cccACCGGCAGCCGCTTCACCGCCGTGGTCCTCGGCCAGCCCCGGCAGTTCTGCTGCCCCGGCTGTCAGGCGGTGGCCGAGTCGATCGTCGCTGGAGGCCTGGAACATta                                                            <  1:91146/110‑1 (MQ=255)                                                                                                                    cccACCGGCAGCCGCTTCACCGCCGTGGTCCTCGGCCAGCCCCGGCACATATGCTGCCCCGGCTGTCAGGCGGTGGCCGACTCGAACGTCGCTGGAGGCCTGGAACAATACTACCAACACCGCAGCTACAACACCGCCAACCCCGaacc                     >  6:99184/1‑147 (MQ=255)                                                                                                                     taatgttccaggcctccagcgacgatcgaCTCGGCCAGCCCCGGCAGTTCTGCTGCCCCGGCTGTCAGGCGGTGGCCGAGTCGa                                                                                     >  1:167091‑M1/30‑84 (MQ=255)                                                                                                                     taatgttccaggcctccagcgacgatcgaCTCGGCCAGCCCCGGCAGTTCTGCTGCCCCGGCTGTCAGGCGGTGGCCGAGTCGa                                                                                     <  2:167091‑M1/55‑1 (MQ=255)                                                                                                                     ccACCGGCAGCCGCTTCACCGCCGTGGTCCTCGGCCAGCCCCGGCAGTTCTGCTGCCCCGGCTGTCAGGCGGTGGCCGAGTCGATCGTCGCTGGAGGCCTGGAACATTACTACCAACACCGCAGCGACAACAGCGCCAACCCCGAAGcc                    >  1:142337/1‑149 (MQ=255)                                                                                                                       aCCGGCAGCCGCTTCACCGCCGTGGTCCTCGGCCAGCCCCGGCAGTTCTGCTGCCCCGGCTGTCAGGCGGTGTCCGAGTCGATCGTCGCTGGAGGCCTGGAACATtactac                                                        >  6:35427/1‑111 (MQ=255)                                                                                                                          ggCAGCCGCTTCACCGCCGTGGTCCTCGGCCAGCCCCGGCAGTTCTGCTGCCCCGGCTGTCAGGCGGTGGCCGAGTCGATCGTCGCTGGAGGCCTGGAACATTACTACCAACACCGCAGCGACAACAGCGCCAACCCCGAAGCCCTGcc               <  7:291546/149‑1 (MQ=255)                                                                                                                              gCCGCTTCACCGCCGTGGTCCTCGGCCAGCGCCGGCAGTTCTGCTGCCCCGGCTGTCAGGCGGTGGCCGAGTCGATCGTCGCTGGAGGCCTGGAACATTACTAcc                                                       >  1:24917/1‑105 (MQ=255)                                                                                                                              gCCGCTTCACCGCCGTGGTCCTCGGCCAGCCCCGGCAGTTCTGCTGCCCCGGCTGTCAGGCGGTGGCCGAGTCGATCGTCGCTGGAGGCCTGGAACATTACTAcc                                                       <  2:24917/105‑1 (MQ=255)                                                                                                                              gCCGCTTCACCGCCGTGGTCCTCGGCCAGCCCCGGCAGTTCTGCTGCCCCGGCTGTCAGGCGGTGGCCGAGTCGATCGTCGCTGGAGGCCTGGAACATTACTACCAACACCGCAGCGACAACAGCGCCAACCCCGAAGCCCTGCCCaaa           <  7:40086/149‑1 (MQ=255)                                                                                                                                 gCTTCACCGCCGTGGTCCTCGGCCAGCCCCGGCAGTTCTGCTGCCCCGGCTGTCAGGCGGTGGCCGAGTCGAACGTCGCTGGAGGCCTGGAACATTACTACCAAACCCGCAGCCACAACAGCGCCAACCCCGCAGCCCTGCCCAaaca         >  5:192640/1‑148 (MQ=255)                                                                                                                                     cACCGCCGTGGTGCTCGGCCAGCCCCGGCAGGTCTGCTGCCCCGGCTGTCAGGCGGTGGCCGAGTGGATCGTCGCTGGAGGCCTGGAACATTACTACCAACACCGCAGCGACAACAGGGCCAACCCCGAAGCCCTGCCCAAACAACTa     <  2:2246/148‑1 (MQ=255)                                                                                                                                      aCCGCCGTGGTCCTCGGCCAGCCCCGGCAGTTCTGCTGCCCCGTCTGTCAGGCGGTGGCCGAGTCGATCGTCGCTGGAGGCCTGGAACATTACTACCAACACCGCAGCGACAACAGCGCCAACCCGGAAGCCCTGCCCAAACAACTAc    <  2:142337/148‑1 (MQ=255)                                                                                                                                       ccgccgTGGTCCTCGGCCAGCCCCGGCAGTTCTGCTGCCCCGGCTGTCAGGCGGTGGCCGAGTCGATCGTCGCTGGAGGCCTGGAACATTACTACCAACACCGCAGCGACAACAGCGCCAACCCCGAAGCCCTGCCCAAACAACTACAg  <  1:235708/149‑1 (MQ=255)                                                                                                                                                  |                                                                                                                                          TTCCAGGTCTGACGCATTCGCGGGCGCGCCCGCTCCCACAGGGTTTCCTATCTGCCTGAGCAGTGTCTGCCCTATGACCCAACCGACCCCCTGCTACCACTGCGCCCTGCCCGTCCCCACCGGCAGCCGCTTCACCGCCGTGGTCCTCGGCCAGCCCCGGCAGTTCTGCTGCCCCGGCTGTCAGGCGGTGGCCGAGTCGATCGTCGCTGGAGGCCTGGAACATTACTACCAACACCGCAGCGACAACAGCGCCAACCCCGAAGCCCTGCCCAAACAACTACAG  >  NC_002947/4845178‑4845460

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.