New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5362551 =	70 (1.430)	4 (0.090)	4/246	NT	5.6%	coding (1215/1341 nt)	glmM	phosphoglucosamine mutase
	?	NC_002947	5362607 =	68 (1.480)					coding (1159/1341 nt)	glmM	phosphoglucosamine mutase

CGGGGCGAAACCCTGGCCCAGGCCCGTCAGGCCCTGCGCAAGTGCCCGCAGGTGCTGATCAATGTGCGCTTTGGCGCCAGCAAGGTCGACCCGCTGGAGCACCCCGCCGTCAAGGAAGCCAGTGCCAAGGTTACCGAAGCGCTGGCGGGGCGGGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5362706‑5362551 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcggggtGCTCCAGCGGGTCGACCTTGCTGGCGCCAAAGCGCACATTGATCAGCACCTGCGGGCACTTGCGCAGGGCCTGACGGGCCTGGGCCAGGGTTT‑CGCCCCGGCGCTTGAGCGCCATCAGCACCTGCAGCGCGGCAATGATCGCGTCGC  >  NC_002947/5362607‑5362753                                                                                                                                                                                                                                                                                                                  CGGGGCGAAACCCTGGCCCAGGCCCGTCAGGCCCTGCGCAAGTGCCCGCAGGTGCTGATCAATGTGCGCTTTGGCGCCAGCAAGGTCGACCCGCTGGAGCACCCCGCCGTCAAGGAAGCCAGTGCCAAGGTTACCGAAGCGCTGGCGGG                                                                                                                                                             <  7:202446/149‑1      CGAAACCCTGGCCCAGGCCCGTCAGGCCCTGCGCTAGTGCCCGCAGGTGCTGATCAATGTGCGCTTTGGCGCCAGCAAGGTCGACCCGCTGGAGCACCCCGCCGGCAAGGAACCCAGTGCCAAGGTTACCGAAGCGCTGGCGGGGCGGG                                                                                                                                                        >  2:225692/1‑149      CGAAACCCTGGCCCAGGCCCGTCAGGCCCTGCGCAAGTGCCCGCAGGTGCTGATCAATGTGCGCTTTGGCGCCAGCAAGGTCGACCCGCTGGAGCACCCCGCCGTCAAGGAAGCCAGTGCCAAGGTTACCGAAGCGCTGGCGGGGCGGG                                                                                                                                                        <  3:278660/149‑1                   CAGGCCCGTCAGGCCCTGCGCAAGTGCCCGCAGGTGCTGATCAATGTGCGCTTTGGCGCCAGCAAGGTCGACCCGCTGGAGCACCCCGCCGTCAAGGAAGCCAGTGCCAAGGTTACCGAAGCGCTGGCGGGGCGGGGT                                                                                                                                                      <  7:71848/138‑1                   CAGGCCCGTCAGGCCCTGCGCAAGTGCCCGCAGGTGCTGATCAATGTGCGCTTTGGCGCCAGCAAGGTCGACCCGCTGGAGCACCCCGCCGTCAAGGAAGCCAGTGCCAAGGTTACCGAAGCGCTGGCGGGGCGGGGT                                                                                                                                                      >  8:71848/1‑138                                                                                                     ACCCCGCCGTCAAGGAAGCCAGTGCCAAGGTTACCGAAGCGCTGGCGGGGCGGGGTGCTCCAGCGGGTCGACCTTGCTGGCGCCAAAGCGCACATTGATCAGCACCTGCGGGCACTTGCGCAGGGCCTGACGGGCCTGGGCCAGGGTTT                                                         >  5:188688/1‑149                                                                                                      CCCCGCCGTCAAGGAAGCCAGTGCCAAGGTTACCGAAGCGCTGGCGGGGCGGGGTGCTCCAGCGGGTCGACCTTGCTGGCGCCAAAGCGCACATTGATCAGCACCTGCGGGCACTTGCGCAGGGCCTGACGGGCCTGGGCCAGG                                                             >  7:283732/1‑144                                                                                                      CCCCGCCGTCAAGGAAGCCAGTGCCAAGGTTACCGAAGCGCTGGCGGGGCGGGGTGCTCCAGCGGGTCGACCTTGCTGGCGCCAAAGCGCACATTGATCAGCACCTGCGGGCACTTGCGCAGGGCCTGACGGGCCTGGGCCAGG                                                             <  8:283732/144‑1                                                                                                                           TGCCAAGGTTACCGAAGCGCTGGCGGGGCGGGGTGCTCCAGCGGGTCGACCTTGCTGGCGCCAAAGCGCACATTGATCAGCACCTGCGGGCACTTGCGCAGGGCCTGACGGGCCTGGGCCAGGGTTT‑CGCCCCGGCGCTTGAGCGCCAT                                  <  6:188688/149‑1                                                                                                                                                     GGCGGGGTGCTCCAGCGGGTCGACCTTGCTGGCGCCAAAGCGCACATTGATCAGCACCTGCGGGCACTTGCGCAGGACCTGACGGGCCTGGGCCAGGGTTTCCGCCCCGGCGCTTGAGCGCCATCAGCACCTGCAGCGCGGCAATGATC         <  1:67015/149‑1                                                                                                                                                      GCGGGGTGCTCCAGCGGGTCGACCTTGCTGGCGCCAAAGCGCACATTGATCAGCACCTGCGGGCACTTGCGCAGGGCCTGACGGGCCTGGGCCAGGGTTT‑CGCCCCGGCGCTTGAGCGCCATCAGCACCTGCAGCGCGGCAATGATCGC       <  6:27518/149‑1                                                                                                                                                         GGGTGCTCCAGCGGGTCGACCTTGCTGGCGCCAAAGCGCACATTGATCAGCACCTGCGGGCACTTGCGCAGGGCCTGACGGGCCTGGGCCAGGGTTT‑CGCCCCGGCGCTTGAGCGCCATCAGCACCTGCCGCGGGGCAATGATTGCGTC    >  3:32776/1‑149                                                                                                                                                          GGTGCTCCAGCGGGTCGACCTTGCTGGCGCCAAAGCGCACATTGATCAGCACCTGCGGGCACTTGCGCAGGGCCTGACGGGCCTGGGCCAGGGTTT‑CGCCCCGGCGCTTGAGCGCCATCAGCACCTGCAGCGCGGCAATGATCGCGTCG   >  1:6877/1‑149                                                                                                                                                           GTGCTCCAGCGGGTCGACCTTGCTGGCGCCAAAGCGCACATTGATCAGCACCTGCGGGCACTTGCGCAGGGCCTGACGGGCCTGGGCCAGGGTTT‑CGCCCCGGCGCTTGAGCGCCATCAGCACCTGCAGCGCGGCAATGATCGCGagat  >  3:180492/1‑145                                                                                                                                                           GTGCTCCAGCGGGTCGACCTTGCTGGCGCCAAAGCGCACATTGATCAGCACCTGCGGGCACTTGCGCAGGGCCTGACGGGCCTGGGCCAGGGTTT‑CGCCCCGGCGCTTGAGCGCCATCAGCACCTGCAGCGCGGCAATGATCGC       <  4:180492/144‑1                                                                                                                                                                                                                                                                                                                  CGGGGCGAAACCCTGGCCCAGGCCCGTCAGGCCCTGCGCAAGTGCCCGCAGGTGCTGATCAATGTGCGCTTTGGCGCCAGCAAGGTCGACCCGCTGGAGCACCCCGCCGTCAAGGAAGCCAGTGCCAAGGTTACCGAAGCGCTGGCGGGGCGGGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5362706‑5362551 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcggggtGCTCCAGCGGGTCGACCTTGCTGGCGCCAAAGCGCACATTGATCAGCACCTGCGGGCACTTGCGCAGGGCCTGACGGGCCTGGGCCAGGGTTT‑CGCCCCGGCGCTTGAGCGCCATCAGCACCTGCAGCGCGGCAATGATCGCGTCGC  >  NC_002947/5362607‑5362753

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.