| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5474944 = | 49 (1.000) | 4 (0.090) | 4/244 | NT | 8.3% | intergenic (‑150/‑156) | proA/PP_4812 | gamma‑glutamyl phosphate reductase/3‑methyladenine DNA glycosylase |
| ? | NC_002947 | 5475014 = | 43 (0.940) | intergenic (‑220/‑86) | proA/PP_4812 | gamma‑glutamyl phosphate reductase/3‑methyladenine DNA glycosylase | |||||
GCAGTTCGTGGCTGGAGAGGCGGGGATGATAGCAATGAATGGCTTAATCGAGGCTGAATTGGACGGTGATGTTGGCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACACAAATCCCAGTGGGAGCGGGCGCGCCCGCTAAAGGGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5475094‑5474944‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaagggccgGCACTGCCAACATCACCGTCCAATTCAGCCTCGATTAAGCCATTCATTGCTATCATCCCCGCCTCTCCAGCCACGAACTGCCCCGCATGCCAGCCCTGCCCGACAGCTTTTTCGACCGCGACGCCCAGACCCTGGCCAAGGCCC > NC_002947/5475014‑5475157 GCAGTTCGTGGCTGGAGACGCGGGGATGATAGCAATGAATGGCTTAATCGAGGCAGAATTGGACGGTCATGTTGGCAGTGCACGCCCTTTCGATGGTAAACACGCTCATACACAAATCCAAGTGGGAGCGGGAGCGCCCGCTAAAAGGC > 2:151973/1‑149 AGTTCGTGGCTGGAGAGGCGGGGATGATAGCAATGAATGGCTTAATCGAGGCTGAATTGGACGGTGATGTTGGCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACACAAATCCCAGTGGGAGCGGGCGCGCCCGCTAAAGGGCCG < 6:154970/149‑1 GCCCTTTCGCGGGTAAACCCGCTCCTACACAAATCCCAGTGGGAGCGGGCGCGCCCGCTAAAGGGCCGGCACTGCCAACATCACCGTCCAATTCAGCCTCGATTAAGCCATTCATTGCTATCATCCCCGCCTCTCCAGCCACGAACTGC > 5:295956/1‑149 CCCTTTCGCGGGTAAACCCGCTCCTACACAAATCCCAGTGGGAGCGGGCGCGCCCGCTAAAGGGCCGGCACTGCCAACATCACCGTCCAATTCAGCCTCGATTAAGCCATTCATTGCTATCATCCCCGCCTCTCCAGCCACGAACTGCC > 8:179236/1‑149 GCGGGTAAACCCGCTCCTACACAAATCCCAGTGGGAGCGGGCGCGCCCGCTAAAGGGCCGGCACTGCCAACATCACCGTCCAATTCAGCCTCGATTAAGCCATTCATTGCTATCATCCCCGCCTCTCCAGCCACGAACTGCCCCGCAT < 7:179236/148‑1 ATCCCAGTGGGAGCGGGCGCGCCCGCTAAAGGGCCGGCACTGCCAACATCACCGTCCAATTCAGCCTCGATTAAGCCATTCATTGCTATCATCCCCGCCTCTCCAGCCACGAACTGCCCCGCATGCCAGCCCTGCCCGACAGCTTTTTC < 6:295956/149‑1 GGCCGGCACTGCCAACATCACCGTCCAATTCAGCCTCGATTAAGCCATTCATTGCTATCATCCCCGCCTCTCCAGCCACGAACTGCCCCGCATGCCAGCCCTGCCCGACAGCTTTTTCGACCGCGACGCCCAGACCCTGGCCAAGGCCC < 3:135642/149‑1 GCAGTTCGTGGCTGGAGAGGCGGGGATGATAGCAATGAATGGCTTAATCGAGGCTGAATTGGACGGTGATGTTGGCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACACAAATCCCAGTGGGAGCGGGCGCGCCCGCTAAAGGGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5475094‑5474944‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaagggccgGCACTGCCAACATCACCGTCCAATTCAGCCTCGATTAAGCCATTCATTGCTATCATCCCCGCCTCTCCAGCCACGAACTGCCCCGCATGCCAGCCCTGCCCGACAGCTTTTTCGACCGCGACGCCCAGACCCTGGCCAAGGCCC > NC_002947/5475014‑5475157 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |