New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5474944 =	49 (1.000)	4 (0.090)	4/244	NT	8.3%	intergenic (‑150/‑156)	proA/PP_4812	gamma‑glutamyl phosphate reductase/3‑methyladenine DNA glycosylase
	?	NC_002947	5475014 =	43 (0.940)					intergenic (‑220/‑86)	proA/PP_4812	gamma‑glutamyl phosphate reductase/3‑methyladenine DNA glycosylase

CGGTGTCTTGGCGAAGGGGAAATCGGCTGATTATAACTGCCGCGCAGGTGTACGCCCAGCGGCGGGTGGCGGATGGTAGAAAATGGATGGGGCAATGTGTAGGAAAGATGTAACCGGGGTTATCGAGATTTCCATCTCCTGTCGCGGCCCTTTAGCGGGCGCGCCCGCTCCCACTGGGATTTGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCACTG‑CCAACATCACCGTCCAATTCAGCCTCGATTAAGCCATTCATTGCTATCATCCCCGCCTCTCCAGCCACGAACT  >  NC_002947/5474800‑5475092                                                                                                                                                 |                                                                                                                                                      gggccttggccagggtctgggcgtcgcggtcgaaaaagctgtcgggcagggctggcatgcggggcagttcgtggctggagaggcggggatgatagcaatgaatggcttaatcgaggctgaattggacggtgatgttggcagtgcCGGcc                                                                                                                                                   <  3:135642‑M1/5‑1 (MQ=255)   gtgtCTTGGCGAAGGGGAAATCGGCTGATTATAACTGCCGCGCAGGTGTACGCCCAGCGGCGGGTGGCTGATGGTAGAAAATGGATGGGGCAATGTGTAGGAAAGATGTAACCGTGGTTATCGAGATTTCCATCTCCTGTCGCgg                                                                                                                                                     <  1:29043/145‑1 (MQ=255)   gtgtCTTGGCGAAGGGGAAATCGGCTGATTATAACTGCCGCGCAGGTGTACGCCCAGCGGCGGGTGGCGGATGGTAGAAAATGGATGGGGCAATGTGTAGGAAAGATGTAACCGGGGTTATCGAGATTTCCATCTCCTGTCGCgg                                                                                                                                                     >  2:29043/1‑145 (MQ=255)      tCTTGGCGAAGGGGAAATCGGCTGATTATATCTGCCGCGCAGGTGTACGCCCAGCGGCGGGTGGCGGATGGTAGAAAATGGATGGGGCAATGTGTAGGAAAGATGTAACCGGGGTTATCGAGATTTCCATCTCCTGTCGCGGCCCtt                                                                                                                                                >  6:211944/1‑147 (MQ=255)            cGAAGGGGAAATCGGCTGATTATAACTGCCGCGCAGGTGTACGCCCAGCGGCGGGTGGCGGATGGTAGAAAATGGATGGGGCAATGTGTAGGAAAGATGTAACCGGGGTTATCGAGATTTCCATCTCCTGTCGCGGCCCTTTAGCGGgc                                                                                                                                        <  4:122927/149‑1 (MQ=255)                       tCGGCTGATTATAACTGCCGCGCAGGTGTACGCCCAGCGGCGGGTGGCGGATGGTAGAAAATGGATGGGGCAATGTGTAGGAAAGATGTAACCGGGGTTATCGAGATTTCCATCTCCTGTCGCGGCCCTTTAGCGGGCGCGCCCGCTcc                                                                                                                             <  3:133724/149‑1 (MQ=255)                         ggCTGATTATAACTGCCGCGCAGGTGTACGCCCAGCGGCGGGTGGCGGATGGTAGAAAATGGATGGGGCAATGTGTAGGAAAGATGTAACCGGGGTTATCGAGATTTCCATCTCCTGTCGCGGCCCTTTAGCGGGCGCGCCCGCtaaag                                                                                                                           <  1:191736/149‑5 (MQ=255)                          tcTGAATATAACTGCCGCGCAGGTGTACGCCCAGCGGCGGGTGGCGGATGGTAGAAAATGGATGGGGCAATGTGTAGGAAAGATGTAACCGGGGTTATCGAGATTTCCATCTCCTGTCGCGGCCCTTTAGCGGGCGCGCCCGCtaaagg                                                                                                                          <  2:186443/148‑6 (MQ=255)                                gaaaaagctgtcgggcagggctggcatgcggggcagttcgtggctggagaggcggggatgatagcaatgaatggcttaatcgaggctgaattggacggtgatgttggcagtgcCGGCCCTTTAGCGGGCGCGCCCGCTCCCACTGGGAt                                                                                                                    <  6:295956‑M1/36‑1 (MQ=255)                                  taACTGCCGCGCAGGTGTACGCCCAGCGGCGGGTGGCGGATGGTAGAAAATGGATGGGGCAATGTGTAGGAAAGATGTAACCGGGGTTATCGAGATTTCCATCTCCTGTCGCGGCCCTTTAGCGGGCGCGCCCGCTCCCACTGGGAttt                                                                                                                  <  2:138955/149‑1 (MQ=255)                                  taACTGCCGCGCAGGTGTACGCCCAGCGGCGGGTGGCGGATGGTAGAAAATCGATGGCGCAATGTGTAGGAAAGATGTAACCGGGGTTATCGGGATTTCCATCTCCTGTCGCGGCCCTTTAGCGGGCGCGCCCGCTCCCACTGGGAttt                                                                                                                  <  4:170826/149‑1 (MQ=255)                                   aaCTGCCGCGCAGGTGTACGCCCAGCGGCGGGTGGCGGATGGTAGAAAATGGATGGGGCAATGTGTAGGAAAGATGTAACCGGGGTTATCGAGATTTCCATCTCCTGTCGCGGCCCTTTAGCGGGCGCGCCCGCTCCCACTGGGATTtg                                                                                                                 >  4:229731/1‑149 (MQ=255)                                        ccGCGCAGGTGTACGCCCAGCGGCGGGTGGCGGATGGTAGAAAATGGATGGGGCAATGTGTAGGAAAGATGTAACCGGGGTTATCGAGATTTCCATCTCCTGTCGCGGCCCTTTAGCGGGCGCGCCCGCTCCCACTGGGATTTgtgt                                                                                                              <  3:130416/147‑1 (MQ=255)                                        ccGCGCAGGTGTACGCCCAGCGGCGGGTGGCGGATGGTAGAAAATGGATGGGGCAATGTGTAGGAAAGATGTAACCGGGGTTATCGAGATTTCCATCTCCTGTCGCGGCCCTTTAGCGGGCGCGCCCGCTCCCACTCGGATTTGTGTAg                                                                                                            >  6:143663/1‑149 (MQ=255)                                                   tACGCCCAGCGGCGGGTGGCGGATGGTAGAAAATGGATGGGGCAATGTGTAGGAAAGATGTAACCGGGGTTATCGAGATTTCCATCTCCTGTCGCGGCCCTTTAGCGGGCGCGCCCGCTCCCACTGGGATTtgt                                                                                                                >  3:282931/1‑134 (MQ=255)                                                   tACGCCCAGCGGCGGGTGGCGGATGGTAGAAAATGGATGGGGCAATGTGTAGGAAAGATGTAACCGGGGTTATCGAGATTTCCATCTCCTGTCGCGGCCCTTTAGCGGGCGCGCCCGCTCCCACTGGGATTtgt                                                                                                                <  4:282931/134‑1 (MQ=255)                                                      gCCCAGCGGCGGGTGGCGGATGGTAGAAAATGGATGGGGCAATGTGTAGGAAAGATGTAACCGGGGTTATCGAGATTTCCATCTCCTGTCGCGGCCCTTTAGCGGGCGCGCCCGCTCCCACTGGGATTTGTGTAGGAGCGGGTTTAccc                                                                                              >  4:259453/1‑149 (MQ=255)                                                      gCCCAGCGGCGGGTGGCGGATGGTAGAAAATGGATGGGGCAATGTGTAGGAAAGATGTAACCGGGGTTATCGAGATTTCCATCTCCTGTCGCGGCCCTTTAGCGGGCGCGCCCGCTCCCACTGGGATTTGTGTAGGAGCGGGTTTAccc                                                                                              >  4:88069/1‑149 (MQ=255)                                                       cccAGCGGCGGGTGGCTGATTGTAGAAAATGGATGGGTCAATGTGTATTAAATATGTAACCTGGTTTATCGAGATTTCCATCTCCTGTCGCGGCCCTTTAGCGGGCGCGCCCGCTCCCACTGGGATTTGTGTAGGAGCGGGTTTAc                                                                                                <  2:295238/146‑1 (MQ=255)                                                       cccAGCGGCGGGTGGCGGATGGTAGAAAATGGATGGGGCAATGTGTAGGAAAGATGTAACCGGGGTTATCGAGATTTCCATCTCCTGTCGCGGCCCTTTAGCGGGCGCGCCCGCTCCCACTGGGATTTGTGTAGGAGCGGGTTTAc                                                                                                >  1:295238/1‑146 (MQ=255)                                                       cccAGCGGCGGGTGGCGGATGGTAGAAAATGGATGGGGCAATGTGTAGGAAAGATGTAACCGGGGTTATCGAGATTTCCATCTCCTGTCGCGGCCCTTTAGCGGGCGCGCCCGCTCCCACTGGGATTTGTGTAGGAGCGGGTTTACCcg                                                                                             >  6:308016/1‑149 (MQ=255)                                                        ccAGCGGCGGGTGGCGGATGGTAGAAAATGGATGGGGCAATGTGTAGGAAAGATGTAACCGGGGTTATCGAGATTTCCATCTCCTGTCGCGGCCCTTTAGCGGGCGCGCCCGCTCCCACTGGGATTTGTGTAGGAGCGGGTTTACCcgc                                                                                            >  4:79687/1‑149 (MQ=255)                                                         atgcggggcagttcgtggctggagaggcggggatgatagcaatgaatggcttaatcgaggctgaattggacggtgatgttggcagtgcCGGCCCTTTAGCGGGCGCGCCCGCTCCCACTGGGATTTGTGTAGGAGCGGGTTTACCcgc                                                                                            <  7:179236‑M1/60‑1 (MQ=255)                                                          aGCGGCGGGTGGCGGATGGTAGAAAATGGATGGGGCAATGTGTAGGAAAGATGTAACCGGGGTTATCGAGATTTCCATCTCCTGTCGCGGCCCTTTAGCGGGCGCGCCCGCTCCCACTGGGATTTGTGTAGGAGCGGGTTTACCCGCGa                                                                                          <  3:88069/149‑1 (MQ=255)                                                               ggcagttcgtggctggagaggcggggatgatagcaatgaatggcttaatcgaggctgaattggacggtgatgttggcagtgcCGGCCCTTTAGCGGGCGCGCCCGCTCCCACTGGGATTTGTGTAGGAGCGGGTTTACCCGCGAAAggg                                                                                     >  8:179236‑M1/83‑149 (MQ=255)                                                                gcagttcgtggctggagaggcggggatgatagcaatgaatggcttaatcgaggctgaattggacggtgatgttggcagtgcCGGCCCTTTAGCGGGCGCGCCCGCTCCCACTGGGATTTGTGTAGGAGCGGGTTTACCCGCGAAAGGGc                                                                                    >  5:295956‑M1/82‑149 (MQ=255)                                                                          tGGTAGAAAATGGATGGGGCAATGTGTAGGAAAGATGTAACCGGGGTTATCGAGATTTCCATCTCCTGTCGCGGCCCTTTAGCGGGCGCGCCCGCTCCCACTGGGATTTGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCACTG‑c                                                                          <  1:107246/148‑1 (MQ=255)                                                                             tAGAAAATGGATGGGGCAATGTGTAGGAAAGATGTAACCGGGGTTATCGAGATTTCCATCTCCTGTCGCGGCCCTTTAGCGGGCGCGCCCGCTCCCACTGGGATTTGTGTAGGAGCGGGTTTAcc                                                                                               <  7:171535/125‑1 (MQ=255)                                                                             tAGAAAATGGATGGGGCAATGTGTAGGAAAGATGTAACCGGGGTTATCGAGATTTCCATCTCCTGTCGCGGCCCTTTAGCGGGCGCGCCCGCTCCCACTGGGATTTGTGTAGGAGCGGGTTTAcc                                                                                               >  8:171535/1‑125 (MQ=255)                                                                             tAGAAAATGGATGGGGCAATGTGTAGGAAAGATGTAACCGGGGTTATCGAGATTTCCATCTCCTGTCGCGGCCCTTTAGCGGGCGCGCCCGCTCCCACTGGGATTTGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCACTG‑CCac                                                                       >  1:208329/1‑147 (MQ=255)                                                                               gAAAATGGATGGGGCAATGTGTAGGAAAGATGTAACCGGGGTTATCGAGATTTCCATCTCCTGTCGCGGCCCTTTAGCGGGCGCGCCCGCTCCCACTGGGATTTGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCACTG‑CCAACAt                                                                    >  6:172534/1‑149 (MQ=255)                                                                               gAAAATGGATGGGGCAATGTGTAGGAAAGATGTAACCGGGGTTATCGAGATTTCCATCTCCTGTCGCGGCCCTTTAGCGGGCGCGCCCGCTCCCACTGGGATTTGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCACTG‑CCAACAt                                                                    <  5:172534/149‑1 (MQ=255)                                                                                aaaaTGGATGGGGCAATGTGTAGGAAAGATGTAACCGGGGTTATCGAGATTTCCATCTCCTGTCGCGGCCCTTTAGCGGGCGCGCCCGCTCCCACTGGGATTTGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCACTG‑CCAACAt                                                                    >  5:114548/1‑148 (MQ=255)                                                                                      gatggGGCAATGTGTAGGAAAGATGTAACCGGGGTTATCGAGATTTCCATCTCCTGTCGCGGCCCTTTAGCGGGCGCGCCCGCTCCCACTGGGATTTGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCACTG‑CCAACATc                                                                   <  8:95796/143‑1 (MQ=255)                                                                                      gatggGGCAATGTGTAGGAAAGATGTAACCGGGGTTATCGAGATTTCCATCTCCTGTCGCGGCCCTTTAGCGGGCGCGCCCGCTCCCACTGGGATTTGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCACTG‑CCAACATc                                                                   >  7:95796/1‑143 (MQ=255)                                                                                      gatggGGCAATGTGTAGGAAAGATGTAACCGGGGTTATCGAGATTTCCATCTCCTGTCGCGGCCCTTTAGCGGGCGCGCCCGCTCCCACTGGGATTTGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCACTG‑CCAACATCACCGTc                                                             <  6:114548/149‑1 (MQ=255)                                                                                             cAATGTGTAGGAAAGATGTAACCGGGGTTATCGAGATTTCCATCTCCTGTCGCGGCCCTTTAGCGGGCGCGCCCGCTCCCACTGGGATTTGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCACTG‑CCAACATCACCGTCCAATTCa                                                      <  5:211944/149‑1 (MQ=255)                                                                                                  tgtAGGAAAGATGTAACCGGGGTTATCGAGATTTCCATCTCCTGTCGCGGCCCTTTAGCGGGCGCGCCCGCTCCCACTGGGATTTGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCACTG‑CCAACATCACCGTCCAATTCAGCCt                                                  <  5:308016/148‑1 (MQ=255)                                                                                                  tgtAGGAAAGATGTAACCGGGGTTATCGAGATTTCCATCTCCTGTCGCGGCCCTTTAGCGGGCGCGCCCGCTCCCACTGGGATTTGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCACTG‑CCAACATCACCGTCCAATTCAGCCTc                                                 >  3:175325/1‑149 (MQ=255)                                                                                                   gtAGGAAAGATGTAACCGGGGTTATCGAGATTTCCATCTCCTGTCGCGGCCCTTTAGCGGGCGCGCCCGCTCCCACTGGGATTTGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCACTG‑CCAACATCACCGTCCAATTCAGCCTc                                                 <  5:143663/148‑1 (MQ=255)                                                                                                      ggAAAGATGTAACCGTGGTTATCGTGATTTCCATCTCCTGTCGCGGCCCTTTAGCGGGCGCGCCCGCTCCGACTGGGATTTGTGTAGGAGCGTGTTTACCCGCGAAAGGGCCGGCACTG‑CCAACATCACCGTCCAATTCAGCCTCGAt                                              <  6:122650/148‑1 (MQ=255)                                                                                                       gAAAGATGTAACCGGGGTTATCGAGATTTCCATCTCCTGTCGCGGCCCTTTAGCGGGCGCGCCCGCTCCCACTGGGATTTGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCACTG‑CCAACATCACCGTCCAATTCAGCCTCGAtt                                             >  2:214484/1‑148 (MQ=255)                                                                                                          aGATGTAACCGGGGTTATCGAGATTTCCATCTCCTGTCGCGGCCCTTTAGCGGGCGCGCCCGCTCCCACTGGGATTTGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCACTG‑CCAACATCACCGTCCAATTCAGCCTCGATTAAGc                                         >  1:184139/1‑149 (MQ=255)                                                                                                               tAACCGGGGTTATCGAGATTTCCATCTCCTGTCGCGGCCCTTTAGCGGGCGCGCCCGCTCCCACTGGGATTTGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCACTG‑CCAACATCACCGTCCAATTCAGCCTCGATTAAGCcatt                                     <  3:114686/148‑1 (MQ=255)                                                                                                                   cGGGGTTATCGAGATTTCCATCTCCTGTCGCGGCCCTTTAGCGGGCGCGCCCGCTCCCACTGGGATTTGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCACTG‑CCAACATCACCGTCCAATTc                                                       >  8:63714/1‑126 (MQ=255)                                                                                                                   cGGGGTTATCGAGATTTCCATCTCCTGTCGCGGCCCTTTAGCGGGCGCGCCCGCTCCCACTGGGATTTGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCACTG‑CCAACATCACCGTCCAATTc                                                       <  7:63714/126‑1 (MQ=255)                                                                                                                    ggggTTATCGAGATTTCCATCTCCTGTCGCGGCCCTTTAGCGGGCGCGCCCGCTCCCACTGGGATTTGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCACTG‑CCAACATCACCGTCCAATTCAGCCTCGATTAAGCCATTCATTGc                               <  3:259453/149‑1 (MQ=255)                                                                                                                     gggTTATCGAGATTTCCATCTCCTGTCGCGGCCCTTTAGCGGGCGCGCCCGCTCCCACTGGGATTTGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCACTG‑CCAACATCACCGTCCAATTCAGCCTCGATTAAGCCATTCATTGCt                              <  4:175325/149‑1 (MQ=255)                                                                                                                      ggTTATCGAGATTTCCATCTCCTGTCGCGGCCCTTTAGCGGGCGCGCCCGCTCCCACTGGGATTTGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCACTG‑CCAACATCACCGTCCAATTCAGCCTCGATTAAg                                          >  2:35507/1‑136 (MQ=255)                                                                                                                      ggTTATCGAGATTTCCATCTCCTGTCGCGGCCCTTTAGCGGGCGCGCCCGCTCCCACTGGGATTTGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCACTG‑CCAACATCACCGTCCAATTCAGCCTCGATTAAg                                          <  1:35507/136‑1 (MQ=255)                                                                                                                       gTTATCGAGATTTCCATCTCCTGTCGCGGCCCTTTAGCGGGCGCGCCCGCTCCCACTGGGATTTGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCACTG‑CCAACATCACCGTCCAATTCAGCCTCGATTAAGCCATTCATTGCTat                            >  5:280236/1‑149 (MQ=255)                                                                                                                            cGAGATTTCCATCTCCTGTCGCGGCCCTTTAGCGGGCGCGCCCGCTCCCACTGGGATTTGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCACTG‑CCAACATCACCGTCCAATTCAGCCTCGATTAAGCCATTCATTGCTATCATcc                       >  3:5073/1‑149 (MQ=255)                                                                                                                                     cATCTCCTGTCGCGGCCCTTTAGCGGGCGCGCCCGCTCCCACTGGGATTTGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCACTG‑CCAACATCACCGTCCAATTCAGCCTCGATTAAGCCATTCATTGCTATCATCCCCGCCtctc              <  3:229731/149‑1 (MQ=255)                                                                                                                                        ctcCTGTCGCGGCCCTTAAGCGGGCGCGCCCGCTCCCACTGGGATTTGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCACTG‑CCAACATCACCGTCCAATTCAGCCTCGATTAAGCCATTCATTGCTATCATCCCAGCCTCTCCAg           >  1:123920/1‑149 (MQ=255)                                                                                                                                           cTGTCGCGGCCCTTTAGCGGGCGCGCCCGCTCCCACTGGGATTTGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCACTGCCCAACATCACCGTCCAATTCAGCCTCGATTAAGCCATTCATTg                                <  1:214736/126‑1 (MQ=255)                                                                                                                                           cTGTCGCGGCCCTTTAGCGGGCGCGCCCGCTCCCACTGGGATTTGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCACTG‑CCAACATCACCGTCCAATTCAGCCTCGATTAAGCCATTCATTg                                >  2:214736/1‑125 (MQ=255)                                                                                                                                                gcgGCCCTTTAGCGGGCGCGCCCGCTCCCACTTGGATTTGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCACTG‑CCAACATCACCGTCCAATTCAGCCTCGATTAAGCCATTCATTGCTATCATCCCCGCCTCTCCAGCCACGaa    <  2:256523/148‑1 (MQ=255)                                                                                                                                                 CGGCCCTTTAGCGGGCGCGCCCGCTCCCACTGGGATTTGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCACTG‑CCAACATCACCGTCCAATTCAGCCTCGATTAAGCCATTCATTGCTATCATCCCCGCCTCTCCAGCCACGAACt  <  6:154970‑M1/149‑1 (MQ=255)                                                                                                                                                 |                                                                                                                                                      CGGTGTCTTGGCGAAGGGGAAATCGGCTGATTATAACTGCCGCGCAGGTGTACGCCCAGCGGCGGGTGGCGGATGGTAGAAAATGGATGGGGCAATGTGTAGGAAAGATGTAACCGGGGTTATCGAGATTTCCATCTCCTGTCGCGGCCCTTTAGCGGGCGCGCCCGCTCCCACTGGGATTTGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCACTG‑CCAACATCACCGTCCAATTCAGCCTCGATTAAGCCATTCATTGCTATCATCCCCGCCTCTCCAGCCACGAACT  >  NC_002947/5474800‑5475092

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.