New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5555208	62 (1.270)	4 (0.090)	4/244	NT	6.1%	coding (317/459 nt)	PP_4887	hypothetical protein
	?	NC_002947	= 5555253	65 (1.430)					coding (272/459 nt)	PP_4887	hypothetical protein

AGTTTCGATGCTGCTTAAAGCTTCTCCAGCATTTTCCTTACGATCAGGCCATGCACCATGCCGACCGGCAGCATGTACAACCGGCCAAAAGTATTGAGGCACAGCACCGATGTGGTCACGCTTAAGCTTTGCCCGTACACATCCATGCAGACCATCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5555052‑5555208 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agaccatcaGCGACCAGCAGCTGGTGCTGACTTCGCGCGACACGCACTTGGCGGTGATGGTCTGCATGGATGTGTACGGGCAAAGCTTAAGCGTGACCACATCGGTGCTGTGCCTCAATACTTTTGGCCGGTTGTACATGCTGCCGGTCGGCATG  <  NC_002947/5555253‑5555108                                                                                                                                                                                                                                                                                                                 AGTTTCGATGCTGCTTAAAGCTTCTCCAGCATTTTCCTTACGATCAGGCCATGCACCATGCCGACCGGCAGCATGTACAACCGGCCAAAAGTATTGAGCCACAGCACCGATGTGGTCACGCTTAAGCTTTGCCCGTACACATCCATGCA                                                                                                                                                            <  8:178142/149‑1   TTTCGATGCTGCTTAAAGCTTCTCCAGCATTTTCCTTACGATCAGGCCATGCACCATGCCGACCGGCAGCATGTACAACCGGCCAAAAGTATTGAGGCACAGCACCGATGTGGTCACGCTTAAGCTTTGCCCGTACACATCCATGCAGA                                                                                                                                                          >  1:123674/1‑149    TTCGATGCTGCTTAAAGCTTCTCCAGCATTTTCCTTACGATCAGGCCATGCACCATGCCGACCGGCAGCATGTACAACCGGCCAAAAGTATTGAGGCACAGCACCGATGTGGTCACGCTTAAGCTTTGCCCGTACACATCCATGCAGAC                                                                                                                                                         >  6:177741/1‑149    TTCGATGCTGCTTAAAGCTTCTCCAGCATTTTCCTTACGATCAGGCCATGCACCATGCCGACCGGCAGCATGTACAACCGGCCAAAAGTATTGAGGCACAGCACCGATGCGGTCACGCTTAAGCTTTGCCCGTACACATCCATGCAGA                                                                                                                                                          <  1:300714/148‑1       GATGCTGCTTAAAGCTTCTCCAGCATTTTCCTTACGATCAGGCCATGCACCATGCCGACCGGCAGCATGTACAACCGGCCAAAAGTATTGAGGCACAGCACCGATGTGGTCACGCTTAAGCTTTGCCCGTACACATCCATGCAGACCAT                                                                                                                                                      <  6:96617/149‑1         TGCTGCTTAAAGCTTCTCCAGCATTTTCCTTACGATCAGGCCATGCACCATGCCGACCGGCAGCATGTACAACCGGCCAAAAGTATTGAGGCACAGCACCGATGTGGTCACGCTTAAGCTTTGCCCGTACACATCCATGCAGACCATCA                                                                                                                                                    >  6:121138/1‑149                                      TTACGATCAGGCCATGCACCATGCCGACCGGCAGCATGTACAACCGGCCAAAAGTATTGAGGCACAGCACCGATGTGGTCACGCTTAAGCTTTGCCCGTACACATCCGTGCAGACCATCAGCGACCAGCAGCTGGTGCTGACTTCGCGC                                                                                                                       >  3:281/1‑149                                                               GACCGGCAGCATGTACAACCGGCCAAAAGTATTGAGGCACAGCACCGATGTGGTCACGCTTAAGCTTTGCCCGTACACATCCGTGCAGACCATCAGCGACCAGCAGCTGGTGCTGACTTCGCGCGACACGCACTTGGCGGTGATGGTCT                                                                                              <  4:281/149‑1                                                                                       AAAAGTATTGAGGCACAGCACCGATGTGGTCACGCTTAAGCTTTGCCCGTACACATCCATGCAGACCATCAGCGACCAGCAGCTGGTGCTGACTTCGCGCGACACGCACTTGGCGGTGATGGTCTGCAT                                                                                          <  5:117675/129‑1                                                                                       AAAAGTATTGAGGCACAGCACCGATGTGGTCACGCTTAAGCTTTGCCCGTACACATCCATGCAGACCATCAGCGACCAGCAGCTGGTGCTGACTTCGCGCGACACGCACTTGGCGGTGATGGTCTGCAT                                                                                          >  6:117675/1‑129                                                                                                                                                      GACCATCAGCGACCAGCAGCTGGTGCTGACTTCGCGCGACACGCACTTGGCGGTGATGGTCTGCATGGATGTGTACGGGCAAAGCTTAAGCGTGACCACATCGGTGCTGTGCCTCAATACTTTTGGCCGGTTGTACATGCTGCCGGTCG       >  5:310381/1‑149                                                                                                                                                         CATCAGCGACCAGCAGCTGGTGCTGACTTCGCGCGACACGCACTTGGCGGTGATGGTCTGCATGGATGTGTACGGGCAAAGCTTAAGCGTGACCACATCGGTGCTGTGCCTCAATACTTTTGGCCGGTTGTACATGCTGCCGGTCGGCA    >  5:177741/1‑149                                                                                                                                                         CATCAGCGACCAGCAGCTGGTGCTGACTTCGCGCGACACGCACTTGGCGGTGATGGTCTGCATGGATGTGTACGGGCAAAGCTTAAGCGTGACCA                                                          >  5:295896/1‑95                                                                                                                                                         CATCAGCGACCAGCAGCTGGTGCTGACTTCGCGCGACACGCACTTGGCGGTGATGGTCTGCATGGATGTGTACGGGCAAAGCTTAAGCGTGACCA                                                          <  6:295896/95‑1                                                                                                                                                          ATCAGCGACCAGCAGCTGGTGCTGACTTCGCGCGACACGCACTTGGCGGTGATGGTCTGCATGGATGTGTACGGGCAAAGCTTAAGCGTGACCACATCGGTGCTGTGCCTCAATACTTTTGGCCGGTTGTACATGCTGCCGGTCGGCAT   >  3:101424/1‑149                                                                                                                                                          ATCAGCGACCAGCAGCTGGTGCTGACTTCGCGCGACACGCACTTGGCGGTGATGGTCTGCATGGATGTGTACGGGCAAAGCTTAAGCGTGACCACATCGGTGCTGTGCCTCAATACTTTTGGCCGGTTGTACATGCTGCCGGTCGGCAT   >  2:232754/1‑149                                                                                                                                                           TCAGCGACCAGCAGCTGGTGCTGACTTCGCGCGACACGCACTTGGCGGTGATGGTCTGCATGGATGTGTACGGGCAAAGCTTAAGCGTGACCACATCGGTGCTGTGCCTCAATACTTTTGGCCGGTTGTACATGCTGCCGGTCGGCATG  <  2:88406/149‑1                                                                                                                                                                                                                                                                                                                 AGTTTCGATGCTGCTTAAAGCTTCTCCAGCATTTTCCTTACGATCAGGCCATGCACCATGCCGACCGGCAGCATGTACAACCGGCCAAAAGTATTGAGGCACAGCACCGATGTGGTCACGCTTAAGCTTTGCCCGTACACATCCATGCAGACCATCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5555052‑5555208 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agaccatcaGCGACCAGCAGCTGGTGCTGACTTCGCGCGACACGCACTTGGCGGTGATGGTCTGCATGGATGTGTACGGGCAAAGCTTAAGCGTGACCACATCGGTGCTGTGCCTCAATACTTTTGGCCGGTTGTACATGCTGCCGGTCGGCATG  <  NC_002947/5555253‑5555108

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.