New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5555208	62 (1.270)	4 (0.090)	4/244	NT	6.1%	coding (317/459 nt)	PP_4887	hypothetical protein
	?	NC_002947	= 5555253	65 (1.430)					coding (272/459 nt)	PP_4887	hypothetical protein

CATGCCGACCGGCAGCATGTACAACCGGCCAAAAGTATTGAGGCACAGCACCGATGTGGTCACGCTTAAGCTTTGCCCGTACACATCCATGCAGACCATCACCGCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑ACCAGCTGCTGGTCGCTGATGGTCTCGACAGT‑GAAGAAGTCCAGGCGCTCACCGACGGCTGGCACATGCATTGGATCGCCGCGAGTGAAGCCGTGGATATCGGCGACATTGAAACGGCGTGAGATAAAGTCGCGAATGCGGAAGGCCCGGGCCAGCCAGCCGGG  >  NC_002947/5555108‑5555401                                                                                                                                                    |                                                                                                                                                      cATGCCGACCGGCAGCATGTACAACCGGCCAAAAGTATTGAGGCACAGCACCGATGTGGTCACGCTTAAGCTTTGCCCGTACACATCCATGCAGACCATCACCGCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑ACCAGCTGCTGGTCGCtga                                                                                                                                                    <  2:88406‑M2/149‑4 (MQ=255)  aTGCCGACCGGCAGCATGTACAACCGGCCAAAAGTATTGAGGCACAGCACCGATGTGGTCACGCTTAAGCTTTGCCCGTACACATCCATGCAGACCATCACCGCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑ACCAGCTGCTGGTCGCtgat                                                                                                                                                   >  3:101424‑M2/1‑145 (MQ=255)  aTGCCGACCGGCAGCATGTACAACCGGCCAAAAGTATTGAGGCACAGCACCGATGTGGTCACGCTTAAGCTTTGCCCGTACACATCCATGCAGACCATCACCGCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑ACCAGCTGCTGGTCGCtgat                                                                                                                                                   >  2:232754‑M2/1‑145 (MQ=255)   tGCCGACCGGCAGCATGTACAACCGGCCAAAAGTATTGAGGCACAGCACCGATGTGGTCACGCTTAAGCTTTGCCCGTACACATCCATGCAGACCATCACCGCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑ACCAGCTGCTGGTCGCtgatg                                                                                                                                                  >  5:177741‑M2/1‑144 (MQ=255)     ccGACCTGCAGCAGGTACAACCGGCCAAAAGTATTGAGGCACAGCACCGATGTGGTAACGCTTAAGCTTTGCCCGTACACATCCATGCATACCATCACCGCC‑AAGTGCGTGGCGCTCGAAGTCAGCGACCAGCAGCTGGT‑GCTGacttc                                                                                                                                                <  4:237436/149‑5 (MQ=255)      cGACCGGCAGCATGTACAACCGGCCAAAAGTATTGAGGCACAGCACCGATGTGGTCACGCTTAAGCTTTGCCCGTACACATCCATGCAGACCATCACCGCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑ACCAGCTGCTGGTCGCtgatggtc                                                                                                                                               >  5:310381‑M2/1‑141 (MQ=255)        aCCGGCAGCATGTACAACCGGCCAAAAGTATTGAGGCACAGCACCGATGTGGTCACGCTTAAGCTTTGCCCGTACACATCCATGCAGACCATCACCGCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑ACCAGCTGCTGGTCGCTGATGGtctc                                                                                                                                             <  5:48214/149‑1 (MQ=255)                caTGTACAACCGGCCAAAAGTATTGAGGCACAGCACCGATGTGGTCACGCTTAAGCTTTGCCCGTACACATCCATGCAGACCATCACCGCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑ACCAGCTGCTGGTCGCTGATGGTCTCGACAGT‑ga                                                                                                                                    <  5:121138/149‑1 (MQ=255)                 aTGTACAACCGGCCAAAAGTATTGAGGCACAGCACCGATGTGGTCACGCTTAAGCTTTGCCCGTACACATCCATGCAGACCATCACCGCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑ACCAGCTGCTGGTCGCTGATGGTCTCGACAGT‑gaa                                                                                                                                   <  4:5813/149‑1 (MQ=255)                 aTGTACAAACGGCCAAAAGTATTGAGGCACAGCACGGATGTGGTCACGCTTAAGCTTTGCCCGTACACATCCATGCAGACCATCACCGCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑ACCAGCTGCTGGTCGCTGATGGTCTCGACAGT‑ga                                                                                                                                    <  5:289406/148‑1 (MQ=255)                    tACAACCGGCCAAAAGTATTGAGGCACAGCACCGATGTGGTCACGCTTAAGCTTTGCCCGTACACATCCATGGAGACGATCACCGCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑ACCAGCTGCTGGTCGCTGATGGTCTCGACAGT‑gaagaa                                                                                                                                <  6:308042/149‑1 (MQ=255)                      cAACCGGCCAAAACTATTGACGCACAGCACCGATGTTGTGAAGCTTAATCTTTTCCCGTACACATCCATGCACACCATCAACGCCTTAGTGCGTGTCGCGCGAAGTCAGC‑ACCAGCTGCTGGTCGCTGATGGTCTCGACAGT‑gaagaa                                                                                                                                <  1:88406/148‑1 (MQ=255)                       aaCCGGCCAAAAGTATTGAGGCACAGCACCGATGTGGTCACGCTTAAGCTTTGCCCGTACACATCCATGCAGACCATCACCGCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑ACCAGCTGCTGGTCGCTGATGGTCTCGACAGT‑GAAGAAGTc                                                                                                                             >  7:176367/1‑149 (MQ=255)                         ccGGCCAAAAGTATTGAGGCACAGCACCGATGTGGTCACGCTTAAGCTTTGCCCGTACACATCCATGCAGACCATCACCGCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑ACCAGCTGCTGGTCGCTGATGGTCTCGACAGT‑GAAGAAGTc                                                                                                                             >  3:72565/1‑147 (MQ=255)                               aaaaGTATTGAGGCACAGCACCGATGTGGTCACGCTTAAGCTTTGCCCGTACACATCCATGCAGACCATCACCGCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑ACCAGCTGCTGGTCGCTGATGGTCTCGACAGT‑GAAGAAGTCCAGGCGCt                                                                                                                     >  2:95999/1‑149 (MQ=255)                                        gAGGCACAGCACCGATGTGGTCACGCTTAAGCTTTGCCCGTACACATCCATGCAGACCATCACCGCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑ACCAGCTGCTGGTCGCTGATGGTCTCGACAGT‑GAAGAAGTCCAg                                                                                                                          >  7:260223/1‑135 (MQ=255)                                        gAGGCACAGCACCGATGTGGTCACGCTTAAGCTTTGCCCGTACACATCCATGCAGACCATCACCGCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑ACCAGCTGCTGGTCGCTGATGGTCTCGACAGT‑GAAGAAGTCCAg                                                                                                                          <  8:260223/135‑1 (MQ=255)                                           gCACAGCACCGATGTGGTCACGCTTAAGCTTTGCCCGTACACATCCATGCAGACCATCACCGCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑ACCAGCTGCTGGTCGCTGATGGTCTCGACAGT‑GAAGAAGTCCAGGCGCTCACCGACGGCTg                                                                                                         <  7:12368/149‑1 (MQ=255)                                           gCACAGCACCGATGTGGTCACGCTTAAGCTTTGCCCGTACACATCCATGCAGACCATCACCGCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑ACCAGCTGCTGGTCGCTGATGGTCTCGACAGT‑GAAGAAGTCCAGGCGCTCACCGACGGCTg                                                                                                         <  1:237925/149‑1 (MQ=255)                                            cacaGCACCGATGTGGTCACGCTTAAGCTTTGCCCGTACACATCCATGCAGACCATCACCGCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑ACCAGCTGCTGGTCGCTGATGGTCTCGACAGT‑GAAGAAGTCCAGGCGCTCACCGACGGCTgg                                                                                                        <  2:204649/149‑1 (MQ=255)                                             acaGCACCGATGTGGTCACGCTTAAGCTTTGCCCGTACACATCCATGCAGACCATCACCGCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑ACCAGCTGCTGGTCGCTGATGGTCTCGACAGT‑GAAGAAGTCCAGGCGCTCACCGACGGCTgg                                                                                                        >  5:47653/1‑148 (MQ=255)                                                 cACCGATGTGGTCACGCTTAAGCTTTGCCCGTACACATCCATGCAGACCATCACCGCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑ACCAGCTGCTGGTCGCTGATGGTCTCGACAGT‑GAAGAAGTCCAGGCGCTCACCGACGGCTGGCACAt                                                                                                   >  7:174716/1‑149 (MQ=255)                                                  aCCGATGTGGTCACGCTTAAGCTTTGCCCGTACACATCCATGCAGACCATCACCGCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑ACCAGCTGCTGGTCGCTGATGGTCTCGACAGT‑GAAGAAGTCCAGGCGCTCACCGACGGCTGGCACATg                                                                                                  >  8:88231/1‑149 (MQ=255)                                                      aTGTGGTCACGCTTAAGCTTTGCCCGTACACATCCATGCAGACCATCACCGCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑ACCAGCTGCTGGTCGCTGATGGTCTCGACAGT‑GAAGAAGTCCAGGCGCTCACCGACGGCTGGCACATGCAtt                                                                                              <  6:47653/149‑1 (MQ=255)                                                      aTGTGGTCACGCTTAAGCTTTGCCCGTACACATCCATGCAGACCATCACCGCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑ACCAGCTGCTGGTCGCTGATGGTCTCGACAGT‑GAAGAAGTCCAGGCGCTCACCGACGGCTGGCACATGCAtt                                                                                              <  7:92827/149‑1 (MQ=255)                                                         tgGTCACGCTTAAGCTTTGCCCGTACACATCCATGCAGACCATCACCGCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑ACCAGCTGCTGGTCGCtgatg                                                                                                                                                  <  6:295896‑M2/95‑6 (MQ=255)                                                         tgGTCACGCTTAAGCTTTGCCCGTACACATCCATGCAGACCATCACCGCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑ACCAGCTGCTGGTCGCtgatg                                                                                                                                                  >  5:295896‑M2/1‑90 (MQ=255)                                                            tCACGCTTAAGCTTTGCCCGTACACATCCATGCAGACCATCACCGCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑ACCAGCTGCTGGTCGCTGATGGTCTCGACAGT‑GAAGAAGTCCAGGCGCTCACCGACGGCTGGCACATGCATTGGATcg                                                                                        >  3:281356/1‑149 (MQ=255)                                                                gCTTAAGCTTTGCCCGTACACATCCATGCAGACCATCACCGCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑ACCAGCTGCTGGTCGCTGATGGTCTCGACAGT‑GAAGAAGTCCAGGCGCTCACCGACGGCTGGCACATGCAtt                                                                                              <  7:82099/139‑1 (MQ=255)                                                                  ttAAGCTTTGCCCGTACACATCCATGCAGACCATCACCGCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑ACCAGCTGCTGGTCGCTGATGGTCTCGACAGT‑GAAGAAGTCCAGGCGCTCACCGACGGCTGGCACATGCAtt                                                                                              <  5:49358/137‑1 (MQ=255)                                                                  ttAAGCTTTGCCCGTACACATCCATGCAGACCATCACCGCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑ACCAGCTGCTGGTCGCTGATGGTCTCGACAGT‑GAAGAAGTCCAGGCGCTCACCGACGGCTGGCACATGCAtt                                                                                              >  6:49358/1‑137 (MQ=255)                                                                  ttAAGCTTTGCCCGTACACATCCATGCAGACCATCACCGCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑ACCAGCTGCTGGTCGCTGATGGTCTCGACAGT‑GAAGAAGTCCAGGCGCTCACCGACGGCTGGCACATGCATTGGATcgccgc                                                                                    >  2:235008/1‑147 (MQ=255)                                                                  ttAAGCTTTGCCCGTACACATCCATGCAGACCATCACCGCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑ACCAGCTGCTGGTCGCTGATGGTCTCGACAGT‑GAAGAAGTCCAGGCGCTCACCGACGGCTGGCACATGCATTGGATcgccgc                                                                                    >  3:83937/1‑147 (MQ=255)                                                                  ttAAGCTTTGCCCGTACACATCCATGCAGACCATCACCGCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑ACCAGCTGCTGGTCGCTGATGGTCTCGACAGT‑GAAGAAGTCCAGGCGCTCACCGACGGCTGGCACATGCATTGGATcgccgc                                                                                    >  4:189731/1‑147 (MQ=255)                                                                     aGCTTTGCCCGTACACATCCATGCAGACCATCACCGCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑ACCAGCTGCTGGTCGCTGATGGTCTCGACAGT‑GAAGAAGTCCAGGCGCTCACCGACGGCTGGCACATGCATTGGATCGCCGCGAGt                                                                                >  7:90269/1‑148 (MQ=255)                                                                       cTTTGCCCGTACACATCCATGCAGACCATCACCGCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑ACCAGCTGCTGGTCGCTGATGGTCTCGACAGT‑GAAGAAGTCCAGGCGCTCACCGACGGCTGGCACATGCATTGGATCGCCGCGAGTGaa                                                                             <  7:88231/149‑1 (MQ=255)                                                                        tttGCCCGTACACATCCATGCAGACCATCACCGCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑ACCAGCTGCTGGTCGCTGATGGTCTCGACAGT‑GAAGAAGTCCAGGCGCTCACCGACGGCTGGCACATGCATTGGATCGCCGCGAGTGAAg                                                                            >  4:31278/1‑149 (MQ=255)                                                                             ccGTACACATCCATGCAGACCATCACCGCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑ACCAGCTGCTGGTCGCTGATGGTCTCGACAGT‑GAAGAAGTCCAGGCGCTCACCGACGGCTGGCACATGCATTGGATCGCCGCGAGTGAAGCCGTg                                                                       >  7:62423/1‑149 (MQ=255)                                                                             ccGTACACATCCATGCAGACCATCACCGCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑ACCAGCTGCTGGTCGCTGATGGTCTCGACAGT‑GAAGAAGTCCAGGCGCTCACCGACGGCTGGCACATGCATTGGATCGCCGCGAGTGAAGCCGTg                                                                       <  4:72565/149‑1 (MQ=255)                                                                              cGTACACATCCATGCAGACCATCACCGCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑ACCAGCTGCTGGTCGCTGATGGTCTCGACAGT‑GAAGAAGTCCAGGCGCTCACCGACGGCTGGCACATGCATTGGATCGCCGCGAGTGAAGCCGTgg                                                                      <  6:177237/149‑1 (MQ=255)                                                                                 acacATCCATGCAGACCATCACCGCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑ACCAGCTGCTGGTCGCTGATGGTCTCGACAGT‑GAAGAAGTCCAGGCGCTCACCGACGGCTGGCACAt                                                                                                   <  1:52249/117‑1 (MQ=255)                                                                                 acacATCCATGCAGACCATCACCGCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑ACCAGCTGCTGGTCGCTGATGGTCTCGACAGT‑GAAGAAGTCCAGGCGCTCACCGACGGCTGGCACAt                                                                                                   >  2:52249/1‑117 (MQ=255)                                                                                 acacATCCATGCAGACCATCACCGCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑ACCAGCTGCTGGTCGCTGATGGTCTCGACAGT‑GAAGAAGTCCAGGCGCTCACCGACGGCTGGCACATGCATTGGa                                                                                           >  2:1225/1‑125 (MQ=255)                                                                                 acacATCCATGCAGACCATCACCGCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑ACCAGCTGCTGGTCGCTGATGGTCTCGACAGT‑GAAGAAGTCCAGGCGCTCACCGACGGCTGGCACATGCATTGGa                                                                                           <  1:1225/125‑1 (MQ=255)                                                                                     aTCCATGCAGACCATCACCGCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑ACCAGCTGCTGGTCGCTGATGGTCTCGACAGT‑GAAGAAGTCCAGGCGCTCACCGACGGCTGGCACATGCATTGGATCGCCGCGAGTGAAGCCGTGGATATCgg                                                               >  5:49809/1‑149 (MQ=255)                                                                                       ccATGCAGACCATCACCGCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑ACCAGCTGCTGGTCGCTGATGGTCTCGACAGT‑GAAGAAGTCCAGGCGCTCACCGACGGCTGGCACATGCATTGGATCGCCGCGAGTGAAGCCGTGGATATCGGc                                                              >  5:114943/1‑148 (MQ=255)                                                                                        cATGCAGGCCATCACCGCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑ACCAGCTGCTGGTCGCTGATGGTCTCGACAGT‑GAAGAAGTCCAGGCGCTCACCGACGGCTGGCACATGCATTGGATCGCCGCGAGTGAAGCCGTGGATATCGGCGa                                                            >  3:67548/1‑149 (MQ=255)                                                                                        cATGCAGACCATCACCGCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑ACCAGCTGCTGGTCGCTGATGGTCTCGACAGT‑GAAGAAGTCCAGGCGCTCACCGACGGCTGGCACATGCATTGGATCGCCGCGAGTGAAGCCGTGGATATCGGCGa                                                            <  6:49809/149‑1 (MQ=255)                                                                                         aTGCAGACCATCACCGCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑ACCAGCTGCTGGTCGCtgatggtctgcatggatgtgtacgggcaaagcttaagcgtgaccacatcggtgctgtgcctcaatactttt                                                                                <  5:117675‑M2/129‑72 (MQ=255)                                                                                         aTGCAGACCATCACCGCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑ACCAGCTGCTGGTCGCtgatggtctgcatggatgtgtacgggcaaagcttaagcgtgaccacatcggtgctgtgcctcaatactttt                                                                                >  6:117675‑M2/1‑58 (MQ=255)                                                                                         aTGCAGACCATCACCGCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑ACCAGCTGCTGGTCGCTGATGGtctc                                                                                                                                             <  1:225921/68‑1 (MQ=255)                                                                                         aTGCAGACCATCACCGCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑ACCAGCTGCTGGTCGCTGATGGtctc                                                                                                                                             >  2:225921/1‑68 (MQ=255)                                                                                          tGCAGACCATCACCGCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑ACCAGCTGCTGGTCGCTGATGGTCTCGACAGT‑GAAGAAGTCCAGGCGCTCACCGACGGCTGGCACATGCATTGGATCGCCGCGAGTGAAGCCGTGGATATCGGCGACa                                                          >  1:33994/1‑149 (MQ=255)                                                                                             aGACCATCACCGCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑ACCAGCTGCTGGTCGCtgatggtctgcacggatgtgtacgggcaaagcttaagcgtgaccacatcggtgctgtgcctcaatacttttggccggttgtacatgctgccggtc                                                        <  4:281‑M2/149‑96 (MQ=255)                                                                                              gACCATCACCGCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑ACCAGCTGCTGGTCGCTGATGGTCTCGACAGT‑GAAGAAGTCCAGGCGCTCACCGACGGCTGGCACATGCATTGGATCGCCGCGAGTGAAGCCGTGGATATCGGCGACATTg                                                       >  2:176652/1‑148 (MQ=255)                                                                                                ccATCACCGCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑ACCAGCTGCTGGTCGCTGATGGTCTCGACAGT‑GAAGAAGTCCAGGCGCTCACCGACGGCTGGCACATGCATTGGATCGCCGCGAGTGAAGCCGTGGATATCGGCGACATTGaaa                                                    <  8:176367/149‑1 (MQ=255)                                                                                                  aTCACCGCC‑AAGTGCGTGTCGCGCTAAGTCAGC‑ACCAGCTGCTGGTCGCTGATGTTCTCGAAAGT‑GATGAAGTCCAGGCGCTCACCTACGGCTGACACATGCATTGGATCGCCGCGAGTGAAGCCGTGGATATCGGCGACATTGAAACg                                                  <  1:235008/149‑1 (MQ=255)                                                                                                     aCCGCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑ACCAGCTGCTGGTCGCTGATGGTCTCGACAGT‑GAAGAAGTCCAGGCGCTCACCGACGGCTGGCACATGCATTGGATCGCCGCGAGTGAAGCCGTGGATATCGGCGACATTg                                                       >  7:272795/1‑141 (MQ=255)                                                                                                     aCCGCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑ACCAGCTGCTGGTCGCTGATGGTCTCGACAGT‑GAAGAAGTCCAGGCGCTCACCGACGGCTGGCACATGCATTGGATCGCCGCGAGTGAAGCCGTGGATATCGGCGACATTg                                                       <  8:272795/141‑1 (MQ=255)                                                                                                        gCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑ACCAGCTGCTGGTCGCTGATGGTCTCGACAGT‑GAAGAAGTCCAGGCGCTCACCGACGGCTGGCACATGCATTGGATCGCCGCGAGTGAAGCCGTGGATATCGGCGACATTGAAACGGCGTga                                            <  4:67548/149‑1 (MQ=255)                                                                                                        gCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑ACCAGCTGCTGGTCGCTGATGGTCTCGACAGT‑GAAGAAGTCCAGGCGCTCACCGACGGCTGGCACATGCATTGGATCGCCGCGAGTGAAGCCGTGGATATCGGCGACATTGAAACGGCGTga                                            <  8:62423/149‑1 (MQ=255)                                                                                                            aaGTGCGTGTCGCGCGAAGTCAGC‑ACCAGCTGCTGGTCGCTGATGGTCTCGACAGT‑GAAGAAGTCCAGGCGCTCACCGACGGCTGGCACATGCATTGGATCGCCGCGAGTGAAGCCGTGGATATCGGCGACATTGAAACGGCGTgaga                                          >  7:19008/1‑148 (MQ=255)                                                                                                                 cGTGTCGCGCGAAGTCAGC‑ACCAGCTGCTGGTCGCTGATGGTCTCGACAGT‑GAAGAAGTCCAGGCGCTCACCGACGGCTGGCACATGCATTGGATCGCCGCGAGTGAAGCCGTGGATATCGGCGACATTGAAACGGCGTGAGATAAAGt                                    <  2:33994/149‑1 (MQ=255)                                                                                                                  gtgtCGCGCGAAGTCAGC‑ACCAGCTGCTGGTCGCTGATGGTCTCGACAGT‑GAAGAAGTCCAGGCGCTCACCGACGGCTGGCACATGCATTGGATCGCCGCGAGTGAAGCCGTGGATATCGGCGACATTGAAACGGCGTGAGATAAAGTc                                   >  1:46019/1‑149 (MQ=255)                                                                                                                     tCGCGCGAAGTCAGC‑ACCAGCTGCTGGTCGCTGATGGTCTCGACAGT‑GAAGAAGTCCAGGCGCTCACCGACGGCTGGCACATGCATTGGATCGCCGCGAGTGAAGCCGTGGATATCGGCGACATTGAAACGGCGTGAGATAAAGTcgc                                 <  8:19008/148‑1 (MQ=255)                                                                                                                       gcgcgAAGTCAGC‑ACCAGCTGCTGGTCGCtgatggtctgcacggatgtgtacgggcaaagcttaagcgtgaccacatcggtgctgtgcctcaatacttttggccggttgtacatgctgccggtcggcatggtgcatggcctgatcgtaa                               >  3:281‑M2/1‑29 (MQ=255)                                                                                                                       gcgcgAAGTCAGC‑ACCAGCTGCTGGTCGCTGATGGTCTCGACAGT‑GAAGAAGTCCAGGCGCTCACCGACGGCTGGCACATGCATTGGATCGCCGCGAGTGAAGCCGTGGATATCGGCGACATTGAAACGGCGTGAGATAAAGTCGCGaa                              >  3:202521/1‑149 (MQ=255)                                                                                                                              gTCAGC‑ACCAGCTGCTGGTCGCTGATGGTCTCGACAGT‑GAAGAAGTCCAGGCGCTCACCGACGGCTGGCACATGCATTGGATCGCCGCGAGTGAAGCCGTGGATATCGGCGACATTGAAACGGCGTGAGATAAAGTCGCGAATGCGGaa                       <  5:71587/149‑1 (MQ=255)                                                                                                                              gTCAGC‑ACCAGCTGCTGGTCGCTGATGGTCTCGACAGT‑GAAGAAGTCCAGGCGCTCACCGACGGCTGGCACATGCATTGGATCGCCGCGAGTGAAGCCGTGGATATCGGCGACATTGAAACGGCGTGAGATAAAGTCGCGAATGCGGaa                       <  3:31278/149‑1 (MQ=255)                                                                                                                                cAGC‑ACCAGCTGCTGGTCGCTGATGGTCTCGACAGT‑GAAGAAGTCCAGGCGCTCACCGACGGCTGGCACATGCATTGGATGGCCGCGAGTGAAGCCGTGGATATCGGCGACATTGAAACGGCGTGAGATAAAGTCGCGAATGCGGAAgg                     >  2:189317/1‑149 (MQ=255)                                                                                                                                cAGC‑ACCAGCTGCTGGTCGCTGATGGTCTCGACAGT‑GAAGAAGTCCAGGCGCTCACCGACGGCTGGCACATGCATTGGAGCGCCGCGAGTGACGCCGTGGATATCGGCGACATTGAAACGGCGTGAGATAAAGTCGCGACTGCGGAAgg                     >  3:49011/1‑149 (MQ=255)                                                                                                                                 aGC‑ACCAGCTGCTGGTCGCTGATGGTCTCGACAGTGGAAGAAGTCCAGGCGCTCACCGACGGCTGGCACATGCATTGGATCGCCGCGAGTGAAGCCGTGGATATCGGCGACATTGAAACGGCGTGAGATAAAGTCGCGAATGCGGAAgg                     >  1:49715/1‑149 (MQ=255)                                                                                                                                  gC‑ACCAGCTGCTGGTCGCTGATGGTCTCGACAGT‑GAAGAAGTCCAGGCGCTCACCGACGGCTGGCACATGCATTGGATCGCCGCGAGTGAAGCCGTGGATATCGGCGACATTGAAACGGCGTGAGATAAAGTCGCGAATGCGGAAGGcc                   >  5:142963/1‑149 (MQ=255)                                                                                                                                   c‑ACCAGCTGCTGGTCGCTGATGGTCTCGACAGT‑GAAGAAGTCCAGGCGCTCACCGACGGCTGGCACATGCATTGGATCGCCGCGAGTGAAGCCGTGGATATCGGCGACATTGAAACGGCGTGAGATAAAGTCGCGAATGCGGACGTccc                  >  4:25235/1‑149 (MQ=255)                                                                                                                                   c‑ACCAGCTGCTGGTCGCTGATGGTCTCGACAGT‑GAAGAAGTCCAGGCGCTCACCGACGGCTGGCACATGCATTGGATCGCCGCGAGTGAAGCCGTGGATATCGGCGACATTGAAACGGCGTGAGATAAAGTCGCGAATGCGGAAGGccc                  <  6:114943/149‑1 (MQ=255)                                                                                                                                     aCCAGCTGCTGGTCGCTGATGGTCTCGACAGT‑GAAGAAGTCCAGGCGCTCACCGACGGCTGGCACATGCATTGGATCGCCGCGAGTGAAGCCGTGGATATCGGCGACATTGAAACGGCGTGAGATAAAGTCGCGAATGCGGAAGGCCCg                 >  1:5100/1‑149 (MQ=255)                                                                                                                                      ccAGCTGCTGGTCGCTGATGGTCTCGACAGT‑GAAGAAGTCCAGGCGCTCACCGACGGCTGGCACATGCATTGGATCGCCGCGAGTGAAGCCGTGGATATCGGCGACATTGAAACGGCGTGAGATAAAGTCGCGAATGCGGAAGGCCCgg                >  7:226136/1‑149 (MQ=255)                                                                                                                                      ccAGCTGCTGGTCGCTGATGGTCTCGACAGT‑GAAGAAGTCCAGGCGCTCACCGACGGCTGGCACATGCATTGGATCGCCGCGAGTGAAGCCGTGGATATCGGCGACATTGAAACGGCGTGAGATAAAGTCGCGAATGCGGAAGGCCCgg                <  6:142963/149‑1 (MQ=255)                                                                                                                                          ctgctgGTCGCTGATGGTCTCGACAGT‑GAAGAAGTCCAGGCGCTCACCGACGGCTGGCACATGCATTGGATCGCCGCGAGTGAAGCCGTGGATATCGGCGACATTGAAACGGCGTGAGATAAAGTCGCGAATGCGGAAGGCCCGGgcca            <  1:189317/149‑1 (MQ=255)                                                                                                                                          ctgctgGTCGCTGATGGTCTCGACAGT‑GAAGAAGTCCAGGCGCTCACCGACGGCTGGCACATGCATTGGATCGCCGCGAGTGAAGCCGTGGATATCGGCGACATTGAAACGGCGTGAGATAAAGTCGCGAATGCGGAAGGCCCGGgcca            <  4:83937/149‑1 (MQ=255)                                                                                                                                                 tCGCTGATGGTCTCGACAGT‑GAAGAAGTCCAGGCGCTCACCGACGGCTGGCACATGCATTGGATCGCCGCGAGTGAAGCCGTGGATATCGGCGACATTGAAACGGCGTGAGATAAAGTCGCGAATGCGGAAGGCCCGGGCCagccagcc     <  2:49715/149‑1 (MQ=255)                                                                                                                                                   gCTGATGGTCTCGACAGT‑GAAGAAGTCCAGGCGCTCACCGACGGCTGGCACATGCATTGGATCGCCGCGAGTGAAGCCGTGGATATCGGCGACATTGAAACGGCGTGAGATAAAGTCGCGAATGCGGAATGCCCGGGCCAGCCAGCCgg   <  2:46019/149‑1 (MQ=255)                                                                                                                                                    cTGATGGTCTCGACAGT‑GAAGAAGTCCAGGCGCTCACCGACGGCTGGCACATGCATTGGATCGCCGCGAGTGAAGCCGTGGATATCGGCGACATTGAAACGGCGTGAGATAAAGTCGCGAATGCGGAAGGCCCGGGCCAGCCAGCCggg  >  4:228476/1‑149 (MQ=255)                                                                                                                                                    |                                                                                                                                                      CATGCCGACCGGCAGCATGTACAACCGGCCAAAAGTATTGAGGCACAGCACCGATGTGGTCACGCTTAAGCTTTGCCCGTACACATCCATGCAGACCATCACCGCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑ACCAGCTGCTGGTCGCTGATGGTCTCGACAGT‑GAAGAAGTCCAGGCGCTCACCGACGGCTGGCACATGCATTGGATCGCCGCGAGTGAAGCCGTGGATATCGGCGACATTGAAACGGCGTGAGATAAAGTCGCGAATGCGGAAGGCCCGGGCCAGCCAGCCGGG  >  NC_002947/5555108‑5555401

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.