New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5555208	62 (1.270)	4 (0.090)	4/244	NT	6.1%	coding (317/459 nt)	PP_4887	hypothetical protein
	?	NC_002947	= 5555253	65 (1.430)					coding (272/459 nt)	PP_4887	hypothetical protein

TGCTGCTTAAAGCTTCTCCAGCATTTTCCTTACGATCAGGCCATGCACCATGCCGACCGGCAGCATGTACAACCGGCCAAAAGTATTGAGGCACAGCACCGATGTGGTCACGCTTAAGCTTTGCCCGTACACATCCATGCAGACCATCACCGCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑ACCAGCTGCTGGTCGCTGATGGTCTCGACAGTGAAGAAGTCCAGGCGCTCACCGACGGCTGGCACATGCATTGGATCGCCGCGAGTGAAGCCGTGGATATCGGCGACATTGAAACG  >  NC_002947/5555060‑5555353                                                                                                                                                     |                                                                                                                                                    tgctgcTTAAAGCTTCTCCAGCATTTTCCTTACGATCAGGCCATGCACCATGCCGACCGGCAGCATGTACAACCGGCCAAAAGTATTGAGGCACAGCACCGATGTGGTCACGCTTAAGCTTTGCCCGTACACATCCATGCAGACCATCA                                                                                                                                                     >  6:121138‑M1/1‑149 (MQ=255)     gctTAAAGCTTCTCCAGCATTTTCCTTACGATCAGGCCATGCACCATGCCGACCGGCAGCATGTACAACCGGCCAAAAGTATTGAGGCACAGCACCGATGTGGTCACGCTTAAGCTTTGCCCGTACACATCCATGCAGACCATCACCGc                                                                                                                                                 >  4:214737/1‑149 (MQ=255)            gCTTCTCCAGCATTTTCCTTACGATCAGGCCATGAACCATGCCGACCGGCAGCATGTACAACCGGCCAAAAGTAATGACGCACAGCACCGATGTGGTCACGCTTAAGCTTTGAACGTACACATCCATGCAGACAATCACAGAC‑AAGTGc                                                                                                                                         >  6:289406/1‑149 (MQ=255)                ctcCAGCATTTTCCTTACGATCAGGCCATGCACCATGCCGACCGGCAGCATGTACAACCGGCCAAAAGTATTGAGGCACAGCACCGATGTGGTCACGCTTAAGCTTTGCCCGTACACATCCATGCAGACCATCACCGCC‑AAGTGCgtg                                                                                                                                      <  7:232272/148‑1 (MQ=255)                   cAGCATTTTCCTTACGATCAGGCCATGCACCATGCCGACCGGCAGCATGTACAACCGGCCAAAAGTATTGAGGCACAGCACCGATGTGGTCACGCTTAAGCTTTGCCCGTACACATCCATGCAGACCATCACCGCC‑AAGTGCGTGTcgc                                                                                                                                  >  1:232754/1‑149 (MQ=255)                        ttttCCTTACGATCAGGCCATGCACCATGCCGACCGGCAGCATGTACAACCGGCCAAAAGTATTGAGGCACAGCACCGATGTGGTCACGCTTAAGCTTTGCCCGTACACATCCATGCAGACCATCACCGCC‑AAGTGCGTGTCGCGCGaa                                                                                                                             <  3:164500/149‑1 (MQ=255)                              ttACGATCAGGCCATGCACCATGCCGACCGGCAGCATGTACAACCGGCCAAAAGTATTGAGGCACAGCACCGATGTGGTCACGCTTAAGCTTTGCCCGTACACATCCGTGCAGACCATCAgcgaccagcagctggtgctgacttcgcgc                                                                                                                        >  3:281‑M1/1‑120 (MQ=255)                              ttACGATCAGGCCATGCACCATGCCGACCGGCAGCATGTACAACCGGCCAAAAGTATTGAGGCACAGCACCGATGTGGTCACGCTTAAGCTTTGCCCGTACACATCCATGCAGACCATCACCGCC‑AAGTGCGTGTCGCGCGAAGTCAg                                                                                                                        >  8:12368/1‑148 (MQ=255)                              ttACGATCAGGCCATGCACCATGCCGACCGGCAGCATGTACAACCGGCCAAAAGTATTGAGGCACAGCACCGATGTGGTCACGCTTAAGCTTTGCCCGTACACATCCATGCAGACCATCACCGCC‑AAGTGCGTGTCGCGCGAAGTCAg                                                                                                                        >  6:48214/1‑148 (MQ=255)                               tACGATCAGGCCATGCACCATGCCGACCGGCAGCATGTACAACCGGCCAAAAGTATTGAGGCACAGCACCGATGTGGTCACGCTTAAGCTTTGCCCGTACACATCCATGCAGACCATCACCGCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑a                                                                                                                     >  1:204649/1‑149 (MQ=255)                                  gATCAGGCCATGCACCATGCCGACCGGCAGCATGTACAACCGGCCAAAAGTATTGAGGCACAGCACCGATGTGGTCACGCTTAAGCTTTGCCCGTACACATCCATGCAGACCATCACCGCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑Ac                                                                                                                    >  8:92827/1‑147 (MQ=255)                                       ggCCATGCACCATGCCGACCGGCAGCATGTACAACCGGCCAAAGGTATTGAGGCACAGCACCGATGTGGTCACGCTTAAGCTTTGCCCGTACACATCCATGCAGACCATCACCGCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑ACCAgctgc                                                                                                             >  6:71587/1‑149 (MQ=255)                                       ggCCATGCACCATGCCGACCGGCAGCATGTACAACCGGCCAAAAGTATTGAGGCACAGCACCGATGTGGTCACGCTTAAGCTTTGCCCGTACACATCCATGCAGACCATCACCGCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑ACCAgctgc                                                                                                             >  2:237925/1‑149 (MQ=255)                                         ccATGCACCATGCCGACCGGCAGCATGTACAACCGGCCAAAAGTATTGAGGCACAGCACCGATGTGGTCACGCTTAAGCTTTGCCCGTACACATCCATGCAGACCATCACCGCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑ACCAGctgctg                                                                                                           <  3:214737/149‑1 (MQ=255)                                          cATGCACCATGCCGACCGGCAGCATGTACAACCGGCCAAAAGTATTGAGGCACAGCACCGATGTGGTCACGCTTAAGCTTTGCCCGTACACATCCATGCAGACCATCACCGCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑ACCAGCTGCTgg                                                                                                          >  5:177237/1‑149 (MQ=255)                                               aCCATGCCGACCGGCAGCATGTACAACCGGCCAAAAGTATTGAGGCACAGCACCGATGTGGTCACGCTTAAGCTTTGCCCGTACACATCCATGCAGACCATCACCGCC‑AAGt                                                                                                                                           >  4:251001/1‑112 (MQ=255)                                                 cATGCCGACCGGCAGCATGTACAACCGGCCAAAAGTATTGAGGCACAGCACCGATGTGGTCACGCTTAAGCTTTGCCCGTACACATCCATGCAGACCATCACCGCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑ACCAGCTGCTGGTCGCtga                                                                                                   <  2:88406‑M2/149‑4 (MQ=255)                                                  aTGCCGACCGGCAGCATGTACAACCGGCCAAAAGTATTGAGGCACAGCACCGATGTGGTCACGCTTAAGCTTTGCCCGTACACATCCATGCAGACCATCACCGCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑a                                                                                                                     <  6:118010/130‑1 (MQ=255)                                                  aTGCCGACCGGCAGCATGTACAACCGGCCAAAAGTATTGAGGCACAGCACCGATGTGGTCACGCTTAAGCTTTGCCCGTACACATCCATGCAGACCATCACCGCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑ACCAGCTGCTGGTCGCtgat                                                                                                  >  2:232754‑M2/1‑145 (MQ=255)                                                  aTGCCGACCGGCAGCATGTACAACCGGCCAAAAGTATTGAGGCACAGCACCGATGTGGTCACGCTTAAGCTTTGCCCGTACACATCCATGCAGACCATCACCGCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑ACCAGCTGCTGGTCGCtgat                                                                                                  >  3:101424‑M2/1‑145 (MQ=255)                                                   tGCCGACCGGCAGCATGTACAACCGGCCAAAAGTATTGAGGCACAGCACCGATGTGGTCACGCTTAAGCTTTGCCCGTACACATCCATGCAGACCATCACCGCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑ACCAGCTGCTGGTCGCtgatg                                                                                                 >  5:177741‑M2/1‑144 (MQ=255)                                                     ccGACCTGCAGCAGGTACAACCGGCCAAAAGTATTGAGGCACAGCACCGATGTGGTAACGCTTAAGCTTTGCCCGTACACATCCATGCATACCATCACCGCC‑AAGTGCGTGGCGCTCGAAGTCAGCGACCAGCAGCTGGT‑GCTGacttc                                                                                               <  4:237436/149‑5 (MQ=255)                                                      cGACCGGCAGCATGTACAACCGGCCAAAAGTATTGAGGCACAGCACCGATGTGGTCACGCTTAAGCTTTGCCCGTACACATCCATGCAGACCATCACCGCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑ACCAGCTGCTGGTCGCtgatggtc                                                                                              >  5:310381‑M2/1‑141 (MQ=255)                                                       gACCGGCAGCATGTACAACCGGCCAAAAGTATTGAGGCACAGCACCGATGTGGTCACGCTTAAGCTTTGCCCGTACACATCCGTGCAGACCATCAgcgaccagcagctggtgctgacttcgcgcgacacgcacttggcggtgatggtct                                                                                               <  4:281‑M1/149‑55 (MQ=255)                                                        aCCGGCAGCATGTACAACCGGCCAAAAGTATTGAGGCACAGCACCGATGTGGTCACGCTTAAGCTTTGCCCGTACACATCCATGCAGACCATCACCGCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑ACCAGCTGCTGGTCGCTGATGGtctc                                                                                            <  5:48214/149‑1 (MQ=255)                                                                caTGTACAACCGGCCAAAAGTATTGAGGCACAGCACCGATGTGGTCACGCTTAAGCTTTGCCCGTACACATCCATGCAGACCATCACCGCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑ACCAGCTGCTGGTCGCTGATGGTCTCGACAGTga                                                                                    <  5:121138/149‑1 (MQ=255)                                                                 aTGTACAACCGGCCAAAAGTATTGAGGCACAGCACCGATGTGGTCACGCTTAAGCTTTGCCCGTACACATCCATGCAGACCATCACCGCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑ACCAGCTGCTGGTCGCTGATGGTCTCGACAGTgaa                                                                                   <  4:5813/149‑1 (MQ=255)                                                                 aTGTACAAACGGCCAAAAGTATTGAGGCACAGCACGGATGTGGTCACGCTTAAGCTTTGCCCGTACACATCCATGCAGACCATCACCGCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑ACCAGCTGCTGGTCGCTGATGGTCTCGACAGTga                                                                                    <  5:289406/148‑1 (MQ=255)                                                                    tACAACCGGCCAAAAGTATTGAGGCACAGCACCGATGTGGTCACGCTTAAGCTTTGCCCGTACACATCCATGGAGACGATCACCGCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑ACCAGCTGCTGGTCGCTGATGGTCTCGACAGTgaagaa                                                                                <  6:308042/149‑1 (MQ=255)                                                                      cAACCGGCCAAAACTATTGACGCACAGCACCGATGTTGTGAAGCTTAATCTTTTCCCGTACACATCCATGCACACCATCAACGCCTTAGTGCGTGTCGCGCGAAGTCAGC‑ACCAGCTGCTGGTCGCTGATGGTCTCGACAGTgaagaa                                                                                <  1:88406/148‑1 (MQ=255)                                                                       aaCCGGCCAAAAGTATTGAGGCACAGCACCGATGTGGTCACGCTTAAGCTTTGCCCGTACACATCCATGCAGACCATCACCGCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑ACCAGCTGCTGGTCGCTGATGGTCTCGACAGTGAAGAAGTc                                                                             >  7:176367/1‑149 (MQ=255)                                                                         ccGGCCAAAAGTATTGAGGCACAGCACCGATGTGGTCACGCTTAAGCTTTGCCCGTACACATCCATGCAGACCATCACCGCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑ACCAGCTGCTGGTCGCTGATGGTCTCGACAGTGAAGAAGTc                                                                             >  3:72565/1‑147 (MQ=255)                                                                               aaaaGTATTGAGGCACAGCACCGATGTGGTCACGCTTAAGCTTTGCCCGTACACATCCATGCAGACCATCAgcgaccagcagctggtgctgacttcgcgcgacacgcacttggcggtgatggtctgcat                                                                                           >  6:117675‑M1/1‑71 (MQ=255)                                                                               aaaaGTATTGAGGCACAGCACCGATGTGGTCACGCTTAAGCTTTGCCCGTACACATCCATGCAGACCATCAgcgaccagcagctggtgctgacttcgcgcgacacgcacttggcggtgatggtctgcat                                                                                           <  5:117675‑M1/129‑59 (MQ=255)                                                                               aaaaGTATTGAGGCACAGCACCGATGTGGTCACGCTTAAGCTTTGCCCGTACACATCCATGCAGACCATCACCGCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑ACCAGCTGCTGGTCGCTGATGGTCTCGACAGTGAAGAAGTCCAGGCGCt                                                                     >  2:95999/1‑149 (MQ=255)                                                                                        gAGGCACAGCACCGATGTGGTCACGCTTAAGCTTTGCCCGTACACATCCATGCAGACCATCACCGCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑ACCAGCTGCTGGTCGCTGATGGTCTCGACAGTGAAGAAGTCCAg                                                                          <  8:260223/135‑1 (MQ=255)                                                                                        gAGGCACAGCACCGATGTGGTCACGCTTAAGCTTTGCCCGTACACATCCATGCAGACCATCACCGCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑ACCAGCTGCTGGTCGCTGATGGTCTCGACAGTGAAGAAGTCCAg                                                                          >  7:260223/1‑135 (MQ=255)                                                                                          ggCACAGCACCGATGTGGTCACGCTTAAGCTTTGCCCGTACACATCCATGCAGACCATCACCGCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑ACCAGCTGCTgg                                                                                                          <  6:244989/101‑1 (MQ=255)                                                                                          ggCACAGCACCGATGTGGTCACGCTTAAGCTTTGCCCGTACACATCCATGCAGACCATCACCGCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑ACCAGCTGCTgg                                                                                                          >  5:244989/1‑101 (MQ=255)                                                                                           gCACAGCACCGATGTGGTCACGCTTAAGCTTTGCCCGTACACATCCATGCAGACCATCACCGCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑ACCAGCTGCTGGTCGCTGATGGTCTCGACAGTGAAGAAGTCCAGGCGCTCACCGACGGCTg                                                         <  1:237925/149‑1 (MQ=255)                                                                                           gCACAGCACCGATGTGGTCACGCTTAAGCTTTGCCCGTACACATCCATGCAGACCATCACCGCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑ACCAGCTGCTGGTCGCTGATGGTCTCGACAGTGAAGAAGTCCAGGCGCTCACCGACGGCTg                                                         <  7:12368/149‑1 (MQ=255)                                                                                            cacaGCACCGATGTGGTCACGCTTAAGCTTTGCCCGTACACATCCATGCAGACCATCACCGCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑ACCAGCTGCTGGTCGCTGATGGTCTCGACAGTGAAGAAGTCCAGGCGCTCACCGACGGCTgg                                                        <  2:204649/149‑1 (MQ=255)                                                                                             acaGCACCGATGTGGTCACGCTTAAGCTTTGCCCGTACACATCCATGCAGACCATCACCGCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑ACCAGCTGCTGGTCGCTGATGGTCTCGACAGTGAAGAAGTCCAGGCGCTCACCGACGGCTgg                                                        >  5:47653/1‑148 (MQ=255)                                                                                                 cACCGATGTGGTCACGCTTAAGCTTTGCCCGTACACATCCATGCAGACCATCACCGCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑ACCAGCTGCTGGTCGCTGATGGTCTCGACAGTGAAGAAGTCCAGGCGCTCACCGACGGCTGGCACAt                                                   >  7:174716/1‑149 (MQ=255)                                                                                                  aCCGATGTGGTCACGCTTAAGCTTTGCCCGTACACATCCATGCAGACCATCACCGCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑ACCAGCTGCTGGTCGCTGATGGTCTCGACAGTGAAGAAGTCCAGGCGCTCACCGACGGCTGGCACATg                                                  >  8:88231/1‑149 (MQ=255)                                                                                                      aTGTGGTCACGCTTAAGCTTTGCCCGTACACATCCATGCAGACCATCACCGCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑ACCAGCTGCTGGTCGCTGATGGTCTCGACAGTGAAGAAGTCCAGGCGCTCACCGACGGCTGGCACATGCAtt                                              <  7:92827/149‑1 (MQ=255)                                                                                                      aTGTGGTCACGCTTAAGCTTTGCCCGTACACATCCATGCAGACCATCACCGCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑ACCAGCTGCTGGTCGCTGATGGTCTCGACAGTGAAGAAGTCCAGGCGCTCACCGACGGCTGGCACATGCAtt                                              <  6:47653/149‑1 (MQ=255)                                                                                                         tgGTCACGCTTAAGCTTTGCCCGTACACATCCATGCAGACCATCACCGCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑ACCAGCTGCTGGTCGCtgatg                                                                                                 >  5:295896‑M2/1‑90 (MQ=255)                                                                                                         tgGTCACGCTTAAGCTTTGCCCGTACACATCCATGCAGACCATCACCGCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑ACCAGCTGCTGGTCGCtgatg                                                                                                 <  6:295896‑M2/95‑6 (MQ=255)                                                                                                            tCACGCTTAAGCTTTGCCCGTACACATCCATGCAGACCATCACCGCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑ACCAGCTGCTGGTCGCTGATGGTCTCGACAGTGAAGAAGTCCAGGCGCTCACCGACGGCTGGCACATGCATTGGATcg                                        >  3:281356/1‑149 (MQ=255)                                                                                                                gCTTAAGCTTTGCCCGTACACATCCATGCAGACCATCACCGCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑ACCAGCTGCTGGTCGCTGATGGTCTCGACAGTGAAGAAGTCCAGGCGCTCACCGACGGCTGGCACATGCAtt                                              <  7:82099/139‑1 (MQ=255)                                                                                                                  ttAAGCTTTGCCCGTACACATCCATGCAGACCATCACCGCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑ACCAGCTGCTGGTCGCTGATGGTCTCGACAGTGAAGAAGTCCAGGCGCTCACCGACGGCTGGCACATGCAtt                                              <  5:49358/137‑1 (MQ=255)                                                                                                                  ttAAGCTTTGCCCGTACACATCCATGCAGACCATCACCGCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑ACCAGCTGCTGGTCGCTGATGGTCTCGACAGTGAAGAAGTCCAGGCGCTCACCGACGGCTGGCACATGCAtt                                              >  6:49358/1‑137 (MQ=255)                                                                                                                  ttAAGCTTTGCCCGTACACATCCATGCAGACCATCACCGCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑ACCAGCTGCTGGTCGCTGATGGTCTCGACAGTGAAGAAGTCCAGGCGCTCACCGACGGCTGGCACATGCATTGGATcgccgc                                    >  4:189731/1‑147 (MQ=255)                                                                                                                  ttAAGCTTTGCCCGTACACATCCATGCAGACCATCACCGCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑ACCAGCTGCTGGTCGCTGATGGTCTCGACAGTGAAGAAGTCCAGGCGCTCACCGACGGCTGGCACATGCATTGGATcgccgc                                    >  3:83937/1‑147 (MQ=255)                                                                                                                  ttAAGCTTTGCCCGTACACATCCATGCAGACCATCACCGCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑ACCAGCTGCTGGTCGCTGATGGTCTCGACAGTGAAGAAGTCCAGGCGCTCACCGACGGCTGGCACATGCATTGGATcgccgc                                    >  2:235008/1‑147 (MQ=255)                                                                                                                     aGCTTTGCCCGTACACATCCATGCAGACCATCACCGCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑ACCAGCTGCTGGTCGCTGATGGTCTCGACAGTGAAGAAGTCCAGGCGCTCACCGACGGCTGGCACATGCATTGGATCGCCGCGAGt                                >  7:90269/1‑148 (MQ=255)                                                                                                                       cTTTGCCCGTACACATCCATGCAGACCATCACCGCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑ACCAGCTGCTGGTCGCTGATGGTCTCGACAGTGAAGAAGTCCAGGCGCTCACCGACGGCTGGCACATGCATTGGATCGCCGCGAGTGaa                             <  7:88231/149‑1 (MQ=255)                                                                                                                        tttGCCCGTACACATCCATGCAGACCATCACCGCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑ACCAGCTGCTGGTCGCTGATGGTCTCGACAGTGAAGAAGTCCAGGCGCTCACCGACGGCTGGCACATGCATTGGATCGCCGCGAGTGAAg                            >  4:31278/1‑149 (MQ=255)                                                                                                                             ccGTACACATCCATGCAGACCATCACCGCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑ACCAGCTGCTGGTCGCTGATGGTCTCGACAGTGAAGAAGTCCAGGCGCTCACCGACGGCTGGCACATGCATTGGATCGCCGCGAGTGAAGCCGTg                       <  4:72565/149‑1 (MQ=255)                                                                                                                             ccGTACACATCCATGCAGACCATCACCGCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑ACCAGCTGCTGGTCGCTGATGGTCTCGACAGTGAAGAAGTCCAGGCGCTCACCGACGGCTGGCACATGCATTGGATCGCCGCGAGTGAAGCCGTg                       >  7:62423/1‑149 (MQ=255)                                                                                                                              cGTACACATCCATGCAGACCATCACCGCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑ACCAGCTGCTGGTCGCTGATGGTCTCGACAGTGAAGAAGTCCAGGCGCTCACCGACGGCTGGCACATGCATTGGATCGCCGCGAGTGAAGCCGTgg                      <  6:177237/149‑1 (MQ=255)                                                                                                                                 acacATCCATGCAGACCATCACCGCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑ACCAGCTGCTGGTCGCTGATGGTCTCGACAGTGAAGAAGTCCAGGCGCTCACCGACGGCTGGCACAt                                                   <  1:52249/117‑1 (MQ=255)                                                                                                                                 acacATCCATGCAGACCATCACCGCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑ACCAGCTGCTGGTCGCTGATGGTCTCGACAGTGAAGAAGTCCAGGCGCTCACCGACGGCTGGCACAt                                                   >  2:52249/1‑117 (MQ=255)                                                                                                                                 acacATCCATGCAGACCATCACCGCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑ACCAGCTGCTGGTCGCTGATGGTCTCGACAGTGAAGAAGTCCAGGCGCTCACCGACGGCTGGCACATGCATTGGa                                           <  1:1225/125‑1 (MQ=255)                                                                                                                                 acacATCCATGCAGACCATCACCGCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑ACCAGCTGCTGGTCGCTGATGGTCTCGACAGTGAAGAAGTCCAGGCGCTCACCGACGGCTGGCACATGCATTGGa                                           >  2:1225/1‑125 (MQ=255)                                                                                                                                     aTCCATGCAGACCATCACCGCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑ACCAGCTGCTGGTCGCTGATGGTCTCGACAGTGAAGAAGTCCAGGCGCTCACCGACGGCTGGCACATGCATTGGATCGCCGCGAGTGAAGCCGTGGATATCgg               >  5:49809/1‑149 (MQ=255)                                                                                                                                       ccATGCAGACCATCACCGCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑ACCAGCTGCTGGTCGCTGATGGTCTCGACAGTGAAGAAGTCCAGGCGCTCACCGACGGCTGGCACATGCATTGGATCGCCGCGAGTGAAGCCGTGGATATCGGc              >  5:114943/1‑148 (MQ=255)                                                                                                                                        cATGCAGGCCATCACCGCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑ACCAGCTGCTGGTCGCTGATGGTCTCGACAGTGAAGAAGTCCAGGCGCTCACCGACGGCTGGCACATGCATTGGATCGCCGCGAGTGAAGCCGTGGATATCGGCGa            >  3:67548/1‑149 (MQ=255)                                                                                                                                        cATGCAGACCATCACCGCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑ACCAGCTGCTGGTCGCTGATGGTCTCGACAGTGAAGAAGTCCAGGCGCTCACCGACGGCTGGCACATGCATTGGATCGCCGCGAGTGAAGCCGTGGATATCGGCGa            <  6:49809/149‑1 (MQ=255)                                                                                                                                         aTGCAGACCATCACCGCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑ACCAGCTGCTGGTCGCtgatggtctgcatggatgtgtacgggcaaagcttaagcgtgaccacatcggtgctgtgcctcaatactttt                               >  6:117675‑M2/1‑58 (MQ=255)                                                                                                                                         aTGCAGACCATCACCGCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑ACCAGCTGCTGGTCGCtgatggtctgcatggatgtgtacgggcaaagcttaagcgtgaccacatcggtgctgtgcctcaatactttt                               <  5:117675‑M2/129‑72 (MQ=255)                                                                                                                                         aTGCAGACCATCACCGCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑ACCAGCTGCTGGTCGCTGATGGtctc                                                                                            >  2:225921/1‑68 (MQ=255)                                                                                                                                         aTGCAGACCATCACCGCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑ACCAGCTGCTGGTCGCTGATGGtctc                                                                                            <  1:225921/68‑1 (MQ=255)                                                                                                                                          tGCAGACCATCACCGCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑ACCAGCTGCTGGTCGCTGATGGTCTCGACAGTGAAGAAGTCCAGGCGCTCACCGACGGCTGGCACATGCATTGGATCGCCGCGAGTGAAGCCGTGGATATCGGCGACa          >  1:33994/1‑149 (MQ=255)                                                                                                                                             aGACCATCACCGCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑ACCAGCTGCTGGTCGCtgatggtctgcacggatgtgtacgggcaaagcttaagcgtgaccacatcggtgctgtgcctcaatacttttggccggttgtacatgctgccggtc       <  4:281‑M2/149‑96 (MQ=255)                                                                                                                                              gACCATCAgcgaccagcagctggtgctgacttcgcgcgacacgcacttggcggtgatggtctgcatggatgtgtacgggcaaagcttaagcgtgaccacatcggtgctgtgcctcaatacttttggccggttgtacatgctgccggtcg        >  5:310381‑M1/1‑8 (MQ=255)                                                                                                                                              gACCATCACCGCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑ACCAGCTGCTGGTCGCTGATGGTCTCGACAGTGAAGAAGTCCAGGCGCTCACCGACGGCTGGCACATGCATTGGATCGCCGCGAGTGAAGCCGTGGATATCGGCGACATTg       >  2:176652/1‑148 (MQ=255)                                                                                                                                                ccATCACCGCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑ACCAGCTGCTGGTCGCTGATGGTCTCGACAGTGAAGAAGTCCAGGCGCTCACCGACGGCTGGCACATGCATTGGATCGCCGCGAGTGAAGCCGTGGATATCGGCGACATTGaaa    <  8:176367/149‑1 (MQ=255)                                                                                                                                                 cATCAgcgaccagcagctggtgctgacttcgcgcgacacgcacttggcggtgatggtctgcatggatgtgtacgggcaaagcttaagcgtgaccacatcggtgctgtgcctcaatacttttggccggttgtacatgctgccggtcggca     >  5:177741‑M1/1‑5 (MQ=255)                                                                                                                                                 cATCAgcgaccagcagctggtgctgacttcgcgcgacacgcacttggcggtgatggtctgcatggatgtgtacgggcaaagcttaagcgtgacca                                                           >  5:295896‑M1/1‑5 (MQ=255)                                                                                                                                                 cATCAgcgaccagcagctggtgctgacttcgcgcgacacgcacttggcggtgatggtctgcatggatgtgtacgggcaaagcttaagcgtgacca                                                           <  6:295896‑M1/95‑91 (MQ=255)                                                                                                                                                  aTCAgcgaccagcagctggtgctgacttcgcgcgacacgcacttggcggtgatggtctgcatggatgtgtacgggcaaagcttaagcgtgaccacatcggtgctgtgcctcaatacttttggccggttgtacatgctgccggtcggcat    >  3:101424‑M1/1‑4 (MQ=255)                                                                                                                                                  aTCAgcgaccagcagctggtgctgacttcgcgcgacacgcacttggcggtgatggtctgcatggatgtgtacgggcaaagcttaagcgtgaccacatcggtgctgtgcctcaatacttttggccggttgtacatgctgccggtcggcat    >  2:232754‑M1/1‑4 (MQ=255)                                                                                                                                                  aTCACCGCC‑AAGTGCGTGTCGCGCTAAGTCAGC‑ACCAGCTGCTGGTCGCTGATGTTCTCGAAAGTGATGAAGTCCAGGCGCTCACCTACGGCTGACACATGCATTGGATCGCCGCGAGTGAAGCCGTGGATATCGGCGACATTGAAACg  <  1:235008/149‑1 (MQ=255)                                                                                                                                                   tCAgcgaccagcagctggtgctgacttcgcgcgacacgcacttggcggtgatggtctgcatggatgtgtacgggcaaagcttaagcgtgaccacatcggtgctgtgcctcaatacttttggccggttgtacatgctgccggtcggcatg   <  2:88406‑M1/149‑147 (MQ=255)                                                                                                                                                     aCCGCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑ACCAGCTGCTGGTCGCTGATGGTCTCGACAGTGAAGAAGTCCAGGCGCTCACCGACGGCTGGCACATGCATTGGATCGCCGCGAGTGAAGCCGTGGATATCGGCGACATTg       >  7:272795/1‑141 (MQ=255)                                                                                                                                                     aCCGCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑ACCAGCTGCTGGTCGCTGATGGTCTCGACAGTGAAGAAGTCCAGGCGCTCACCGACGGCTGGCACATGCATTGGATCGCCGCGAGTGAAGCCGTGGATATCGGCGACATTg       <  8:272795/141‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                    TGCTGCTTAAAGCTTCTCCAGCATTTTCCTTACGATCAGGCCATGCACCATGCCGACCGGCAGCATGTACAACCGGCCAAAAGTATTGAGGCACAGCACCGATGTGGTCACGCTTAAGCTTTGCCCGTACACATCCATGCAGACCATCACCGCC‑AAGTGCGTGTCGCGCGAAGTCAGC‑ACCAGCTGCTGGTCGCTGATGGTCTCGACAGTGAAGAAGTCCAGGCGCTCACCGACGGCTGGCACATGCATTGGATCGCCGCGAGTGAAGCCGTGGATATCGGCGACATTGAAACG  >  NC_002947/5555060‑5555353

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.