| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5718380 = | 53 (1.080) | 7 (0.150) | 5/252 | NT | 13.0% | coding (1079/1917 nt) | PP_5020 | methyl‑accepting chemotaxis protein |
| ? | NC_002947 | 5718426 = | 43 (0.910) | coding (1125/1917 nt) | PP_5020 | methyl‑accepting chemotaxis protein | |||||
GTGCACGGTGGCAGTCATCTGGTTCATCGCAGTCGCCACCTGGTCGGTTTCGACCTTCTGATTGTTGACCCCGGCGCTGGTCTGTTCTGTCACCGCCGACAGCTCCTCGGCAGCGCTGGCGATCTGCGTCACGCCATCGCCAATGCCGCCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5718531‑5718380‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgaGGAGCTGTCGGCGGTGACAGAACAGACCAGCGCCGGGGTCAACAATCAGAAGGTCGAAACCGACCAGGTGGCGACTGCGATGAACCAGATGACTGCCACCGTGCACGAAGTGGCACGCAATGCCGAACAGGCTTCGGAAGCC > NC_002947/5718426‑5718567 GTGCACGGTGGCAGTCATCTGGTTCATCGCAGTCGCCACCTGGTCGGTTTCGACCTTCTGATTGTTGACCCCGGCGCTGGTCTGTTCTGTCACCGCCGACAGCTCCTCGGCAGCGCTGGCGATCTGCGTCACGCCATCGCCAATGCCGC < 3:222019/149‑1 GCACGGTGGCAGTCATCTGGTTCATCGCAGTCGCCACCTGGTCGGTTTCGACCTTCTGATTGTTGACCCCGGCGCTGGTCTGTTCTGTCACCGCCGACAGCTCCTCGGCAGCGCTGGCGATCTGCGTCACGCCATCGCCAATGCCGCC < 1:42178/148‑1 CTCCTCGGCAGCGCTGGCGATCTGCGTCACGCCATCGCCAATGCCGCCGAGGAGCTGTCGGCGGTGACAGAACAGACCAGCGCCGGGGTCAACAATCAGAAGGTCGAAACCGACCAGGTGGCGACTGCGATGAACCAGATGACTGCCAC > 8:162845/1‑149 CTCCTCGGCAGCGCTGGCGATCTGCGTCACGCCATCGCCAATGCCGCCGAGGAGCTGTCGGCGGTGACAGAACAGACCAGCGCCGGGGTCAACAATCAGAAGGTCGAAACCGACCAGGTG > 5:29955/1‑120 CTCCTCGGCAGCGCTGGCGATCTGCGTCACGCCATCGCCAATGCCGCCGAGGAGCTGTCGGCGGTGACAGAACAGACCAGCGCCGGGGTCAACAATCAGAAGGTCGAAACCGACCAGGTG < 6:29955/120‑1 TCCTCGGCAGCGCTGGCGATCTGCGTCACGCCATCGCCAATGCCGCCGAGGAGCTGTCGGCGGTGACAGAACAGACCAGCGCCGGGGTCAACAATCAGAAGGTCGAAACCGACCAGGTGGCGACTGCGATGAACCAGATGACTGCCACC > 5:40514/1‑149 TCCTCGGCAGCGCTGGCGATCTGCGTCACGCCATCGCCAATGCCGCCGAGGAGCTGTCGGCGGTGACAGAACAGACCAGCGCCGGGGTCAACAATCAGAAGGTCGAAACCGACCAGGTGGCGACTGCGATGAACCAGATGACTGCCACC > 7:13594/1‑149 CTGGCGATCTGCGTCACGCCATCGCCAATGCCGCCGAGGAGCTGTCGGCGGTGACAGAACAGACCAGCGCCGGGGTCAACAATCAGAAGGTCGAAACCGACCAGGTGGCGACTGCGATGAACCAGATGACTGCCACCGTGCACGAAGTG < 6:40514/149‑1 GCCATCGCCAATGCCGCCGAGGAGCTGTCGGCGGTGACAGAACAGACCAGCGCCGGGGTCAACAATCAGAAGGTCGAAACCGACCAGGTGGCGACTGCGATGAACCAGATGACTGCCACCGTGCACGAAGTGGCACGCAATGCCGAACA < 7:162845/149‑1 CCGCCGAGGAGCTGTCGGCGGTGACAGAACAGACCAGCGCCGGGGTCAACAATCAGAAGGTCGAAACCGACCAGGTGGCGACTGCGATGAACCAGATGACTGCCACCGTGCACGAAGTGGCACGCAATGCCGAACAGGCTTCGGAAGCC < 8:13594/149‑1 GTGCACGGTGGCAGTCATCTGGTTCATCGCAGTCGCCACCTGGTCGGTTTCGACCTTCTGATTGTTGACCCCGGCGCTGGTCTGTTCTGTCACCGCCGACAGCTCCTCGGCAGCGCTGGCGATCTGCGTCACGCCATCGCCAATGCCGCCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5718531‑5718380‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgaGGAGCTGTCGGCGGTGACAGAACAGACCAGCGCCGGGGTCAACAATCAGAAGGTCGAAACCGACCAGGTGGCGACTGCGATGAACCAGATGACTGCCACCGTGCACGAAGTGGCACGCAATGCCGAACAGGCTTCGGAAGCC > NC_002947/5718426‑5718567 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |