New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5718380 =	53 (1.080)	7 (0.150)	5/252	NT	13.0%	coding (1079/1917 nt)	PP_5020	methyl‑accepting chemotaxis protein
	?	NC_002947	5718426 =	43 (0.910)					coding (1125/1917 nt)	PP_5020	methyl‑accepting chemotaxis protein

AGTGGAGACCTGACCCAGAGCCTGCAGGTACAACGCCGCGACGAACTGGGCCAATTGCAGGCCAGCATGCATCGCATGACCCAAGGTTTGCGTGAACTGATCGGCGGCATTGGCGATGGCGTGACGCAGATCGCCAGCGCTGCCGAGGAGCTGTCGGCGGTGACAGAACAGACCAGCGCCGGGGTCAACAATCAGAAGGTCGAAACCGACCAGGTGGCGACTGCGATGAACCAGATGACTGCCACCGTGCACGAAGTGGCACGCAATGCCGAACAGGCTTCGGAAGCC  >  NC_002947/5718280‑5718567                                                                                                                                                   |                                                                                                                                              ggtggcagtcatctggttcatcgcagtcgccacctggtcggtttcgaccttctgattgttgaccccggcgctggtctgttctgtcaccgccgacagctccTCGGCGGCATTGGCGATGGCGTGACGCAGATCGCCAGCGCTGCCgagga                                                                                                                                             >  7:13594‑M1/101‑149 (MQ=255) ggtggcagtcatctggttcatcgcagtcgccacctggtcggtttcgaccttctgattgttgaccccggcgctggtctgttctgtcaccgccgacagctccTCGGCGGCATTGGCGATGGCGTGACGCAGATCGCCAGCGCTGCCgagga                                                                                                                                             >  5:40514‑M1/101‑149 (MQ=255) aGTGGAGACCTGACCCAGAGCCTGCAGGTACAACGCCGCGACGAACTGGGCCAATTGCAGGCCAGCATGCATCGCATGACCCAAGGTTTGCGTGAACTGATCGGCGGCATTGGCGATGGCGTGACGCAGATCGCCAGCGCTGCCgagga                                                                                                                                             <  4:109031/149‑1 (MQ=255)  gtggcagtcatctggttcatcgcagtcgccacctggtcggtttcgaccttctgattgttgaccccggcgctggtctgttctgtcaccgccgacagctccTCGGCGGCATTGGCGATGGCGTGACGCAGATCGCCAGCGCTGCCgaggag                                                                                                                                            >  8:162845‑M1/100‑149 (MQ=255)  gTGGAGACCTGACCCAGAGCCTGCAGGTACAACGCCGCGACGAACTGGGCCAATTGCAGGCCAGCATGCATCGCATGACCCAAGGTTTGCGTGAACTGATCGGCGGCATTGGCGATGGCGTGACGCAGATCGCCAGCGCTGCCgaggag                                                                                                                                            >  7:85558/1‑149 (MQ=255)             aCCCAGAGCCTGCAGGTACAACGCCGCGACGAACTGGGCCAATTGCAGGCCAGCATGCATCGCATGACCCAAGGTTTGCGTGAACTGATCGGCGGCATTGGCGATGGCGTGACGCAGATCGCCAGCGCTGCCGAGGAGCTGTCGGCGGt                                                                                                                                 <  1:237510/149‑1 (MQ=255)             aCCCAGAGCCTGCAGGTACAACGCCGCGACGAACTGGGCCAATTGCAGGCCAGCATGCATCGCATGACCCAAGGTTTGCGTGAACTGATCGGCGGCATTGGCGATGGCGTGACGCAGATCGCCAGCGCTGCCGAGGAGCTGTCGGCGGt                                                                                                                                 >  5:70015/1‑149 (MQ=255)               ccAGAGCCTGCAGGTACAACGCCGCGACGAACTGGGCCAATTGCAGGCCAGCATGCATCGCATGACCCAAGGTTTGCGTGAACTGATCGGCGGCATTGGCGATGGCGTGACGCAGATCGCCAGCGCTGCCGAGGAGCTGTCGGCGGTGa                                                                                                                               <  6:70015/149‑1 (MQ=255)               ccAGAGCCTGCAGGTACAACGCCGCGACGAACTGGGCCAATTGCAGGCCAGCATGCATCGCATGACCCAAGGTTTGCGTGAACTGATCGGCGGCATTGGCGATGGCGTGACGCAGATCGCCAGCGCTGCCGAGGAGCTGTCGGCGGTGa                                                                                                                               <  3:51215/149‑1 (MQ=255)                  gagCCTGCAGGTACAACGCCGCGACGAACTGGGCCAATTGCAGGCCAGCATGCATCGCATGACCCAAGGTTTGCGTGAACTGATCGGCGGCATTGGCGATGGCGTGACGCAGATCGCCAGCGCTGCCGAGGAGCTGTCGGCGGTGacag                                                                                                                            <  1:11411/149‑1 (MQ=255)                  gagCCTGCAGGTACAACGCCGCGACGAACTGGGCCAATTGCAGGCCAGCATGCATCGCATGACCCAAGGTTTGCGTGAACTGATCGGCGGCATTGGCGATGGCGTGACGCAGATCGCCAGCGCTGCCGAGGAGCTGTCGGCGGTGacag                                                                                                                            <  1:16183/149‑1 (MQ=255)                     ccTGCAGGTACAACGCCGCGACGAACTGGGCCAATTGCAGGCCAGCATGCATCGCATGACCCAAGGTTTGCGTGAACTGATCGGCGGCATTGGCGATGGCGTGACGCAGATCGCCAGCGCTGCCGAGGAGCTGt                                                                                                                                        <  2:53406/134‑1 (MQ=255)                     ccTGCAGGTACAACGCCGCGACGAACTGGGCCAATTGCAGGCCAGCATGCATCGCATGACCCAAGGTTTGCGTGAACTGATCGGCGGCATTGGCGATGGCGTGACGCAGATCGCCAGCGCTGCCGAGGAGCTGt                                                                                                                                        >  1:53406/1‑134 (MQ=255)                     ccTGCAGGTACAACGCCGCGACGAACTGGGCCAATTGCAGGCCAGCATGCATCGCATGACCCAAGGTTTGCGTGAACTGATCGGCGGCATTGGCGATGGCGTGACGCAGATCGCCAGCGCTGCCGAGGAGCTGTCGGCGGTGacagaa                                                                                                                          >  5:202805/1‑148 (MQ=255)                         cAGGTACAACGCCGCGACGAACTGGGCCAATTGCAGGCCAGCATGCATCGCATGACCCAAGGTTTGCGTGAACTGATCGGCGGCATTGGCGATGGCGTGACGCAGATCGCCAGCGCTGCCGAGGAGCTGTCGGCGGTGacagaacag                                                                                                                       <  7:163599/147‑1 (MQ=255)                         cAGGTACAACGCCGCGACGAACTGGGCCAATTGCAGGCCAGCATGCATCGCATGACCCAAGGTTTGCGTGAACTGATCGGCGGCATTGGCGATGGCGTGACGCAGATCGCCAGCGCTGCCGAGGAGCTGTCGGCGGTGACAGAACAGAc                                                                                                                     <  8:85558/149‑1 (MQ=255)                               cacctggtcggtttcgaccttctgattgttgaccccggcgctggtctgttctgtcaccgccgacagctccTCGGCGGCATTGGCGATGGCGTGACGCAGATCGCCAGCGCTGCCgaggag                                                                                                                                            <  6:29955‑M1/50‑1 (MQ=255)                               cacctggtcggtttcgaccttctgattgttgaccccggcgctggtctgttctgtcaccgccgacagctccTCGGCGGCATTGGCGATGGCGTGACGCAGATCGCCAGCGCTGCCgaggag                                                                                                                                            >  5:29955‑M1/71‑120 (MQ=255)                                        gacgaACTGGGCCAATTGCAGGCCAGCATGCATCGCATGACCCAAGGTTTGCGTGAACTGATCGGCGGCATTGGCGATGGCGTGACGCAGATCGCCAGCGCTGCCGAGGAGCTGTCGGCGGTGACAGAACAGACCAGCGCCGGGGTca                                                                                                       >  7:124625/1‑148 (MQ=255)                                                  gCCAATTGCAGGCCAGCATGCATCGCATGACCCAAGGTTTGCGTGAACTGATCGGCGGCATTGGCGATGGCGTGACGCAGATCGCCAGCGCTGCCGAGGAGCTGTCGGCGGTGACAGAACAGACCAGCGCCGGGGTCAACAATCAGAAg                                                                                            >  5:101629/1‑149 (MQ=255)                                                   ccAATTGCAGGCCAGAATGCATCGCATGACCCAAGGTTTGCGTGAACTGATCGGCGGCATTGGCGATGGCGTGACGCAGATCGCCGGCCCTCCCGAGGAGCTGTCGGCGGTGACAGAACAGACCAGCGCCGTGGGCAACAATCAGCAgg                                                                                           >  4:158304/1‑149 (MQ=255)                                                           aGGCCAGCATGCATCGCATGACCCAAGGTTTGCGTGAACTGATCGGCGGCATTGGCGATGGCGTGACGCAGATCGCCAGCGCTGCCGAGGAGCTGTCGGCGGTGACAGAACAGACCAGCGCCGGGGTCAACAATCAGAAGGTCGAAAcc                                                                                   >  2:64713/1‑149 (MQ=255)                                                              caaGCATGCATCGCTTGACCCAAGGCTTGCGTGAACTGATCGGCGGCATTGGCGATGGCGTGACGCAGATCGGCAGCGCTGCCGAGGAGCTGTCGGCGGTGACTGAACAGACCAGCGCCGGGGTCAACAATCAGAAGGTCGAAACCGAc                                                                                <  8:206436/147‑1 (MQ=255)                                                                   atgcatCGCATGACCCAAGGTTTGCGTGAACTGATCGGCGGCATTGGCGATGGCGTGACGCAGATCGCCAGCGCTGCCGAGGAGCTGTCGGCGGTGACAGAACAGACCAGCGCCGGGGTCAACAATCAGAAGGTCGAAACCGACCAGGt                                                                           >  1:96047/1‑149 (MQ=255)                                                                    tgcatCGCATGACCCAAGGTTTGCGTGAACTGATCGGCGGCATTGGCGATGGCGTGACGCAGATCGCCAGCGCTGCCGAGGAGCTGTCGGCGGTGACAGAACAGACCAGCGCCGGGGTCAACAATCAGAAGGTCGAAACCGACCAGGTg                                                                          >  6:157699/1‑149 (MQ=255)                                                                      catCGCATGACCCAAGGTTTGCGTGAACTGATCGGCGGCATTGGCGATGGCGTGACGCAGATCGCCAGCGCTGCCGAGGAGCTGTCGGCGGTGACAGAACAGACCAGCGCCGGGGTCAACAATCAGAAGGTCGAAACCGACCAGGTGGc                                                                        <  5:157699/149‑1 (MQ=255)                                                                           cATGACCCAAGGTTTGCGTGAACTGATCGGCGGCATTGGCGATGGCGTGACGCAGATCGCCAGCGCTGCCGAGGAGCTGTCGGCGGTGACAGAACAGACCAGCGCCGGGGTCAACAATCAGAAGGTCGAAACCGACCAGGTGGCGACTg                                                                   >  5:20537/1‑149 (MQ=255)                                                                            aTGACCCAAGGTTTGCGTGAACTGATCGGCGGCATTGGCGATGGCGTGACGCAGATCGCCAGCGCTGCCGAGGAGCTGTCGGCGGTGACAGAACAGACCAGCGCCGGGGTCAACAATCAGAAGGTCGAAACCGACCAGGTGGCGACTGc                                                                  >  7:33487/1‑149 (MQ=255)                                                                               aCCCAAGGTTTGCGTGAACTGATCGGCGGCATTGGCGATGGCGTGACGCAGATCGCCAGCGCTGCCGAGGAGCTGTCGGCGGTGACAGAACAGACCAGCGCCGGGGTCAACAATCAGAAGGTCGAAACCGACCAGGTGGCGACTGCGa                                                                <  1:64713/148‑1 (MQ=255)                                                                                  cAAGGTTTGCGTGAACTGATCGGCGGCATTGGCGATGGCGTGACGCAGATCGCCAGCGCTGCCGAGGAGCTGTCGGCGGTGACAGAACAGACCAGCGCCGGGGTCAACAATCAGAAGGTCGAAACCGACCAGGTGGCGACTGCGATGaa                                                            >  2:111734/1‑149 (MQ=255)                                                                                   aaGGTTTGCGTGAACTGATCGGCGGCATTGGCGATGGCGTGACGCAGATCGCCAGCGCTGCCGAGGAGCTGTCGGCGGTGACAGAACAGACCAGCGCCGGGGTCAACAATCAGAAGGTCGAAACCGACCAGGTGGCGACTGCGATGAAc                                                           <  1:111734/149‑1 (MQ=255)                                                                                     ggTTTGCGTGAACTGATCGTCGGCATTGCCGATGGCGTGACGCAGTTCGCCGGCGCTGCCGAGGAGCTGTCGGCGGTGACAGAACAGACCAGCGCCGGGGTCAACAATCAGAAGGTCGAAACCGACCAGGTGGCGACTGCGATGAACCa                                                         <  3:158304/149‑1 (MQ=255)                                                                                      gTTTGCGTGAACTGATCGGCGGCATTGGCGATGGCGTGACGCAGATCGCCAGCGCTGCCGAGGAGCTGTCGGCGGTGACAGAACAGACCAGCGCCggg                                                                                                           <  1:67718/98‑1 (MQ=255)                                                                                      gTTTGCGTGAACTGATCGGCGGCATTGGCGATGGCGTGACGCAGATCGCCAGCGCTGCCGAGGAGCTGTCGGCGGTGACAGAACAGACCAGCGCCggg                                                                                                           >  2:67718/1‑98 (MQ=255)                                                                                       tttGCGTGAACTGATCGGCGGCATTGGCGATGGCGTGACGCAGATCGCCAGCGCTGCCGAGGAGCTGTCGGCGGTGACAGAACAGACCAGCGCCGGGGTCAACAATCAGAAGGTCGAAACCGACCAGGTGGCGACTGCGATGAAc                                                           >  7:68369/1‑145 (MQ=255)                                                                                            gTGAACTGATCGGCGGCATTGGCGATGGCGTGACGCAGATCGCCAGCGCTGCCGAGGAGCTGTCGGCGGTGACAGAACAGACCAGCGCCGGGGTCAACAATCAGAAGGTCGAAACCGACCAGGTGGCGACTGCGATGAACCAGATGACt                                                  >  1:9342/1‑149 (MQ=255)                                                                                             tGAACTGATCGGCGGCATTGGCGATGGCGTGACGCAGATCGCCAGCGCTGCCGAGGAGCTGTCGGCGGTGACAGAACAGACCAGCGCCGGGGTCAACAATCAGAAGGTCGAAACCGACCAGGTGGCGACTGCGATGAACCAGATGACTg                                                 <  6:20537/149‑1 (MQ=255)                                                                                              gAACTGATCGGCGGCATTGGCGATGGCGTGACGCAGATCGCCAGCGCTGCCGAGGAGCTGTCGGCGGTGACAGAACAGACCAGCGCCgg                                                                                                            <  6:292196/89‑1 (MQ=255)                                                                                              gAACTGATCGGCGGCATTGGCGATGGCGTGACGCAGATCGCCAGCGCTGCCGAGGAGCTGTCGGCGGTGACAGAACAGACCAGCGCCgg                                                                                                            >  5:292196/1‑89 (MQ=255)                                                                                               aaCTGATCGGCGGCATTGGCGATGGCGTGACGCAGATCGCCAGCGCTGCCGAGGAGCTGTCGGCGGTGACAGAACAGACCAGCGCCGGGGTCAACAATCAGAAGGTCGAAACCGACCAGGTGGCGACTGCGATGAACCAGATGACTGc                                                >  8:263800/1‑148 (MQ=255)                                                                                                 ctcctcggcagcgctggcgatctgcgtcacgccatcgccaatgccgccgaGGAGCTGTCGGCGGTGACAGAACAGACCAGCGCCGGGGTCAACAATCAGAAGGTCGAAACCGACCAGGTg                                                                          <  6:29955‑M2/70‑1 (MQ=255)                                                                                                 ctcctcggcagcgctggcgatctgcgtcacgccatcgccaatgccgccgaGGAGCTGTCGGCGGTGACAGAACAGACCAGCGCCGGGGTCAACAATCAGAAGGTCGAAACCGACCAGGTg                                                                          >  5:29955‑M2/51‑120 (MQ=255)                                                                                                 ctcctcggcagcgctggcgatctgcgtcacgccatcgccaatgccgccgaGGAGCTGTCGGCGGTGACAGAACAGACCAGCGCCGGGGTCAACAATCAGAAGGTCGAAACCGACCAGGTGGCGACTGCGATGAACCAGATGACTGCCAc                                             >  8:162845‑M2/51‑149 (MQ=255)                                                                                                  tcctcggcagcgctggcgatctgcgtcacgccatcgccaatgccgccgaGGAGCTGTCGGCGGTGACAGAACAGACCAGCGCCGGGGTCAACAATCAGAAGGTCGAAACCGACCAGGTGGCGACTGCGATGAACCAGATGACTGCCAcc                                            >  7:13594‑M2/50‑149 (MQ=255)                                                                                                  tcctcggcagcgctggcgatctgcgtcacgccatcgccaatgccgccgaGGAGCTGTCGGCGGTGACAGAACAGACCAGCGCCGGGGTCAACAATCAGAAGGTCGAAACCGACCAGGTGGCGACTGCGATGAACCAGATGACTGCCAcc                                            >  5:40514‑M2/50‑149 (MQ=255)                                                                                                       GGCGGCATTGGCGATGGCGTGACGCAGATCGCCAGCGCTGCCGAGGAGCTGTCGGCGGTGACAGAACAGACCAGCGCCGGGGTCAACAATCAGAAGGTCGAAACCGACCAGGTGGCGACTGCGATGAACCAGATGACTGCCACCGTGc                                        <  1:42178‑M1/148‑1 (MQ=255)                                                                                                        GCGGCATTGGCGATGGCGTGACGCAGATCGCCAGCGCTGCCGAGGAGCTGTCGGCGGTGACAGAACAGACCAGCGCCGGGGTCAACAATCAGAAGGTCGAAACCGACCAGGTGGCGACTGCGATGAACCAGATGACTGCCACCGTGCAc                                      <  3:222019‑M1/149‑1 (MQ=255)                                                                                                           gcATTGGCGATGGCGTGACGCAGATCGCCAGCGCTGCCGAGGAGCTGTCGGCGGTGACAGAACAGACCAGCGCCGGGGTCAACAATCAGAAGGTCGAAACCGACCAGGTGGCGACTGCGATGAACCAGATGACTGCCACCGTGCACg                                     >  4:237588/1‑147 (MQ=255)                                                                                                              ttGGCGATGGCGTGACGCAGATCGCCAGCGCTGCCGAGGAGCTGTCGGCGGTGACAGAACAGACCAGCGCCGGGGTCAACAATCAGAAGGTCGAAACCGACCAGGTGGCGACTGCGATGAACCAGATGACTGCCACCGTGCACGAAGTg                                <  3:237588/149‑1 (MQ=255)                                                                                                              ctggcgatctgcgtcacgccatcgccaatgccgccgaGGAGCTGTCGGCGGTGACAGAACAGACCAGCGCCGGGGTCAACAATCAGAAGGTCGAAACCGACCAGGTGGCGACTGCGATGAACCAGATGACTGCCACCGTGCACGAAGTg                                <  6:40514‑M2/112‑1 (MQ=255)                                                                                                               tGGCGATGGCGTGACGCAGATCGCCAGCGCTGCCGAGGAGCTGTCGGCGGTGAAAGAACAGACCAGCGCCGGGGTCAACAATCAGAAGGTCGAAACCGACCAGGTGGCGACTGCGATGAACCAGATGACTGCCACCGTGCACGAAGTg                                >  2:194842/1‑148 (MQ=255)                                                                                                                       gCGTGACGCAGATCGCCAGCGCTGCCGAGGAGCTGTCGGCGGTGACAGAACAGACCAGCGCCGGGGTCAACAATCAGAAGGTCGAAACCGACCAGGTGGCGACTGCGATGAACCAGATGACTGCCACCGTGCACGAAGTGGCACGCAAt                       >  7:175950/1‑149 (MQ=255)                                                                                                                        cGTGACGCAGATCGCCAGCGCTGCCGAGGAGCTGTCGGCGGTGACAGAACAGACCAGCGCCGGGGTCAACAATCAGAAGGTCGAAACCGACCAGGTGGCGACTGCGATGAACCAGATGACTGCCACCGTGCACGAAGTGGCACGCAATg                      <  8:33487/149‑1 (MQ=255)                                                                                                                          tGACGCAGATCGCCAGCGCTGCCGAGGAGCTGTCGGCGGTGACAGAACAGACCAGCGCCGGGGTCAACAATCAGAAGGTCGAAACCGACCAGGTGGCGACTGCGATGAACCAGATGACTGCCACCGTGCACGAAGTGGCACGCAATGcc                    <  8:124625/149‑1 (MQ=255)                                                                                                                              gCAGATCGCCAGCGCTGCCGAGGAGCTGTCGGCGGTGACAGAACAGACCAGCGCCGGGGTCAACAATCAGAAGGTCGAAACCGACCAGGTGGCGACTGCGATGAACCAGATGACTGCCACCGTGCACGAAGTGGCACGCAATGCCGaa                 >  6:196985/1‑148 (MQ=255)                                                                                                                               gccatcgccaatgccgccgaGGAGCTGTCGGCGGTGACAGAACAGACCAGCGCCGGGGTCAACAATCAGAAGGTCGAAACCGACCAGGTGGCGACTGCGATGAACCAGATGACTGCCACCGTGCACGAAGTGGCACGCAATGCCGAACa               <  7:162845‑M2/129‑1 (MQ=255)                                                                                                                                 gATCGCCAGCGCTGCCGAGGAGCTGTCGGCGGTGACAGAACAGACCAGCGCCGGGGTCAACAATCAGAAGGTCGAAACCGACCAGGTGGCGACTGCGATGAACCAGATGACTGCCACCGTGCACGAAGTGGCACGCAATGCCGAACAgg             >  8:30641/1‑149 (MQ=255)                                                                                                                                     gCCAGCGCTGCCGAGGAGCTGTCGGCGGTGACAGAACAGACCAGCGCCGGGGTCAACAATCAGAAGGTCGAAACCGACCAGGTGGCGACTGCGATGAACCAGATGACTGCCACCGTGCACGAAGTGGCACGCACTGCCGAACAGGCtt          <  7:263800/148‑1 (MQ=255)                                                                                                                                      ccAGCGCTGCCGAGGAGCTGTCGGCGGTGACAGAACAGACCAGCGCCGGGGTCAACAATCAGAAGGTCGAAACCGACCAGGTGGCGACTGCGATGAACCAGATGACTGCCACCGTGCACGAAGTGGCACGCAATGCCGAACAGGCTTCg        >  3:117289/1‑149 (MQ=255)                                                                                                                                         gcgcTGCCGAGGAGCTGTCGGCGGTGACAGAACAGACCAGCGCCGGGGTCAACAATCAGAAGGTCGAAACCGACCAGGTGGCGACTGCGATGAACCAGATGACTGCCACCGTGCACGAAGTGGCACGCAATGCCGAACAGGCTTCgg       >  7:12852/1‑147 (MQ=255)                                                                                                                                            ccgccgaGGAGCTGTCGGCGGTGACAGAACAGACCAGCGCCGGGGTCAACAATCAGAAGGTCGAAACCGACCAGGTGGCGACTGCGATGAACCAGATGACTGCCACCGTGCACGAAGTGGCACGCAATGCCGAACAGGCTTCGGAAgcc  <  8:13594‑M2/142‑1 (MQ=255)                                                                                                                                             tGCCGAGGAGCTGTCGGCGGTGACAGAACAGACCAGCGCCGGGGTCAACAATCAGAAGGTCGAAACCGACCAGGTGGCGACTGCGATGAAc                                                           <  5:33537/91‑1 (MQ=255)                                                                                                                                             tGCCGAGGAGCTGTCGGCGGTGACAGAACAGACCAGCGCCGGGGTCAACAATCAGAAGGTCGAAACCGACCAGGTGGCGACTGCGATGAAc                                                           >  6:33537/1‑91 (MQ=255)                                                                                                                                                   |                                                                                                                                              AGTGGAGACCTGACCCAGAGCCTGCAGGTACAACGCCGCGACGAACTGGGCCAATTGCAGGCCAGCATGCATCGCATGACCCAAGGTTTGCGTGAACTGATCGGCGGCATTGGCGATGGCGTGACGCAGATCGCCAGCGCTGCCGAGGAGCTGTCGGCGGTGACAGAACAGACCAGCGCCGGGGTCAACAATCAGAAGGTCGAAACCGACCAGGTGGCGACTGCGATGAACCAGATGACTGCCACCGTGCACGAAGTGGCACGCAATGCCGAACAGGCTTCGGAAGCC  >  NC_002947/5718280‑5718567

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.