New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5819865 =	30 (0.610)	3 (0.070)	3/244	NT	8.6%	coding (305/591 nt)	PP_5096	shape determination factor
	?	NC_002947	5819919 =	36 (0.790)					coding (359/591 nt)	PP_5096	shape determination factor

CCAGGCGGCGGAACGGCGCCAGCACCGGCTCGCTGATCTGGTAGGCCAGTTCGGCCGCCGGGTTGTGGCTGTTGGGTGCAACCCAGGAAACGATCACCATGACGATCATCGCCACCCAGAAAATCTTCAGGAACAGCGAGGTGATGCCGATGATCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5820020‑5819865 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgatgatcgTCATGGTGATCGTTTCCTGGGTTGCACCCAACAGCCACAACCCGGCGGCCGAACTGGCCTACCAGATCAGCGAGCCGGTGCTGGCGCCGTTCCGCCGCCTGGTGCCAAATCTGGGTGGCATGGACATCTCGCCGATCTTCGC  >  NC_002947/5819919‑5820060                                                                                                                                                                                                                                                                                                            CCAGGCGGCGGAACGGCGCCAGCACCGGCTCGCTGATCTGGTAGGCCAGTTCGGCCGCCGGGTTGTGGCTGTTGGGTGCAACCCAGGAAACGATCACCATGACGATCATCGCCACCCAGAAAATCTTCAGGAACAGCGAGGTGATGCCG                                                                                                                                                       <  4:197220/149‑1     GCGGCGGAACGGCGCCAGCACCGGCTCGCTGATCTGGTAGGCCAGTTCGGCCGCCGGGTTGTGGCTGTTGGGTGCAACCCAGGAAACGATCACCATGACGATCATCGCCACCCAGAAAATCTTCAGGAACAGCGAGGTGATGCCGATGA                                                                                                                                                   <  2:248932/149‑1                                                                                                        GATCATCGCCACCCAGAAAATCTTCAGGAACAGCGAGGTGATGCCGATGATCGTCATGGTGATCGTTTCCTGGGTTGCACCCAACAGCCACAACCCGGCGGCCGAACTGGCCTACCAGATCAGCGAGCCGGTGCTGGCGCCGTTCCGCC                                                >  3:6734/1‑149                                                                                                              CGCCACCCAGAAAATCTTCAGGAACAGCGAGGTGATGCCGATGATCGTCATGGTGATCGTTTCCTGGGTTGCACCCAACAGCCACAACCCGGCGGCCGAACTGGCCTACCAGATCAGCGAGCCGGTGCTGGCGCCGT                                                      >  1:229366/1‑137                                                                                                              CGCCACCCAGAAAATCTTCAGGAACAGCGAGGTGATGCCGATGATCGTCATGGTGATCGTTTCCTGGGTTGCACCCAACAGCCACAACCCGGCGGCCGAACTGGCCTACCAGATCAGCGAGCCGGTGCTGGCGCCGT                                                      <  2:229366/137‑1                                                                                                                                                    CGATGATCGTCATGGTGATCGTTTCCTGGGTTGCACCCAACAGCCACAACCCGGCGGCCGAACTGGCCTACCAGATCAGCGAGCCGGTGCTGGCGCCGTTCCGCCGCCTGGTGCCAAATCTGGGTGGCATGGACATCTCGCCGATCTTC    <  4:290116/149‑1                                                                                                                                                      ATGATTGTCATGGTGATCGTTTCCTGGGTTGCACCCAACAGCCACAACCCGGCGGCCGAACTGGCCTACCAGATCAGCGAGCCGGTGCTGGCGCCGTTCCGCCGCCTGGTGCCAAATCTGGGTGGCATGGACATCTCGCCGATCTTCGC  >  5:188524/1‑149                                                                                                                                                                                                                                                                                                            CCAGGCGGCGGAACGGCGCCAGCACCGGCTCGCTGATCTGGTAGGCCAGTTCGGCCGCCGGGTTGTGGCTGTTGGGTGCAACCCAGGAAACGATCACCATGACGATCATCGCCACCCAGAAAATCTTCAGGAACAGCGAGGTGATGCCGATGATCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5820020‑5819865 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgatgatcgTCATGGTGATCGTTTCCTGGGTTGCACCCAACAGCCACAACCCGGCGGCCGAACTGGCCTACCAGATCAGCGAGCCGGTGCTGGCGCCGTTCCGCCGCCTGGTGCCAAATCTGGGTGGCATGGACATCTCGCCGATCTTCGC  >  NC_002947/5819919‑5820060

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.