New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5819865 =	30 (0.610)	3 (0.070)	3/244	NT	8.6%	coding (305/591 nt)	PP_5096	shape determination factor
	?	NC_002947	5819919 =	36 (0.790)					coding (359/591 nt)	PP_5096	shape determination factor

AAGCCGATCCGCCGGATCATCCCTAGCGTTGGCGGGCTGGATACCTCGTCGCTACTGCTGGCGGTGGTCATCCAGGCCTTGCTGATGGGCTTTGTGCTGATGGTCACCTACGGTACCTTCGGCGACGTCCTGCACCTGCTGATGTGGGCGATCATCGGCATCACCTCGCTGTTCCTGAAGATTTTCTGGGTGGCGATGATCGTCATGGTGATCGTTTCCTGGGTTGCACCCAACAGCCACAACCCGGCGGCCGAACTGGCCTACCAGATCAGCGAGCCGGTGCTGGCGCCGTTCC  >  NC_002947/5819717‑5820011                                                                                                                                                     |                                                                                                                                                   aaGCCGATCCGCCGGATCATCCCTAGCGTTGGCGGGCTGGATACCTCGTCGCTACTGCTGGCGGTGGTCATCCAGGCCTTGCTGATGGGCTTTGTGCTGATGGTCACCTACGGTACCTTCGGCGACGTCCTGCACCTGCTGATGTGGGc                                                                                                                                                    >  4:302165/1‑149 (MQ=255)       gcgaagatcggcgagatgtccatgccacccagatttggcaccaggcggcggaacggcgccagcaccggctcgctgatctggtaggccagttcggccgccgggttgtggctgttgggtgcaacccaggaaacgatcaccatgaCAatcat                                                                                                                                              >  5:188524‑M1/143‑149 (MQ=255)        tCCGCCGGATCATCCCTAGCGTTGGCGGGCTGGATACCTCGTCGCTACTGCTGGCGGTGGTCATCCAGGCCTTGCTGATGGGCTTTGTGCTGATGGTCACCTACGGTACCTTCGGCGACGTCCTGCACCTGCTGATGTGGGCGatcatc                                                                                                                                             <  5:250508/149‑1 (MQ=255)         gaagatcggcgagatgtccatgccacccagatttggcaccaggcggcggaacggcgccagcaccggctcgctgatctggtaggccagttcggccgccgggttgtggctgttgggtgcaacccaggaaacgatcaccatgaCGATCATCg                                                                                                                                            <  4:290116‑M1/9‑1 (MQ=255)                atcatcCCTAGCGTTGGCGGGCTGGATACCTCGTCGCTACTGCTGGCGGTGGTCATCCAGGCCTTGCTGATGGGCTTTGTGCTGATGGTCACCTACGGTACCTTCGGCGACGTCCTGCACCTGCTGATGTGGGCGATCATCGGCATCAc                                                                                                                                     >  2:104578/1‑149 (MQ=255)                   atcCCTAGCGTTGGCGGGCTGGATACCTCGTCGCTACTGCTGGCGGTGGTCATCCAGGCCTTGCTGATGGGCTTTGTGCTGATGGTCACCTACGGTACCTTCGGCGACGTCCTGCACCTGCTGATGTGGGCGATCATCGGCATCACCTc                                                                                                                                  <  7:179066/149‑1 (MQ=255)                                gCGGGCTGGATACCTCGTCGCTACTGCTGGCGGTGGTCATCCAGGCCTTGCTGATGGGCTTTGTGCTGATGGTCACCTACGGTACCTTCGGCGACGTCCTGCACCTGCTGATGTGGGCGATCATCGGCATCACCTCGCTGTTCCTGaa                                                                                                                      <  2:1644/148‑1 (MQ=255)                                        gATACCTCGTCGCTACTGCTGGCGGTGGTCATCCAGGCCTTGCTGATGGGCTTTGTGCTGATGGTCACCTACGGTACCTTCGGCGACGTCCTGCACCTGCTGATGTGGGc                                                                                                                                                    <  4:184207/110‑1 (MQ=255)                                        gATACCTCGTCGCTACTGCTGGCGGTGGTCATCCAGGCCTTGCTGATGGGCTTTGTGCTGATGGTCACCTACGGTACCTTCGGCGACGTCCTGCACCTGCTGATGTGGGc                                                                                                                                                    >  3:184207/1‑110 (MQ=255)                                             cTCGTCGCTACTGCTGGCGGTGGTCATCCAGGCCTTGCTGATGGGCTTTGTGCTGATGGTCACCTACGGTACCTTCGGCGACGTCCTGCACCTGCTGATGTGGGCGATCATCGGCATCACCTCGCTGTTCCTGAAGATTTTCt                                                                                                              <  2:86295/143‑1 (MQ=255)                                             cTCGTCGCTACTGCTGGCGGTGGTCATCCAGGCCTTGCTGATGGGCTTTGTGCTGATGGTCACCTACGGTACCTTCGGCGACGTCCTGCACCTGCTGATGTGGGCGATCATCGGCATCACCTCGCTGTTCCTGAAGATTTTCt                                                                                                              >  1:86295/1‑143 (MQ=255)                                                     ggcggaacggcgccagcaccggctcgctgatctggtaggccagttcggccgccgggttgtggctgttgggtgcaacccaggaaacgatcaccatgaCGATCATCGGCATCACCTCGCTGTTCCTGAAGATTTTCTGGGTGGCGATGATc                                                                                                >  3:6734‑M1/97‑149 (MQ=255)                                                          ctgGCGGTGGTCATCCAGGCCTTGCTGATGGGCTTTGTGCTGATGGTCACCTACGGTACCTTCGGCGACGTCCTGCACCTGCTGATGTGGGCGATCATCGGCATCACCTCGCTGTTCCTGAAGATTTTCTGGGTGGCGATGATCGTCAt                                                                                           >  5:281939/1‑149 (MQ=255)                                                           tgGCGGTGGTCATCCAGGCCTTGCTGATGGGCTTTGTGCTGATGGTCACCTACGGTACCTTCGGCGACGTCCTGCACCTGCTGATGTGGGCGATCATCGGCATCACCTCGCTGTTCCTGAAGATTTTCTGGGTGGCGATGATCGTCATg                                                                                          <  1:278576/149‑1 (MQ=255)                                                           acggcgccagcaccggctcgctgatctggtaggccagttcggccgccgggttgtggctgttgggtgcaacccaggaaacgatcaccatgaCGATCATCGGCATCACCTCGCTGTTCCTGAAGATTTTCTGGGTGGCg                                                                                                      <  2:229366‑M1/47‑1 (MQ=255)                                                           acggcgccagcaccggctcgctgatctggtaggccagttcggccgccgggttgtggctgttgggtgcaacccaggaaacgatcaccatgaCGATCATCGGCATCACCTCGCTGTTCCTGAAGATTTTCTGGGTGGCg                                                                                                      >  1:229366‑M1/91‑137 (MQ=255)                                                               gttggtAATCCAGGCCTTGCTGATGGTCTTTGTGCTGATGGTCACCTACGGTACCTTCGTCGACGTCCTGCACCTGCTGATGTGGGAGATCATCTTCATCACCTCGCTGTTCACGAAGATTTTCTGGGTGGCGATGATCGTCATGGTGa                                                                                      <  3:75018/147‑1 (MQ=255)                                                                       tCCAGGCCTTGCTGATGGGCTTTGTGCTGATGGTCACCTACGGTACCTTCGGCGACGTCCTGCACCTGCTGATGTGGGCGATCATCGGCATCACCTCGCTGTTCCTGAAg                                                                                                                     <  7:262565/110‑1 (MQ=255)                                                                       tCCAGGCCTTGCTGATGGGCTTTGTGCTGATGGTCACCTACGGTACCTTCGGCGACGTCCTGCACCTGCTGATGTGGGCGATCATCGGCATCACCTCGCTGTTCCTGAAg                                                                                                                     >  8:262565/1‑110 (MQ=255)                                                                       tCCAGGCCTTGCTGATCGGCTTTGTGCTGATGGTCACCTACGGTACCTTCGGCGACGTCCTGCACCTGCTGATGTGGGCGATCATCGGCATCACCTCGCTGTTCCTGAAGATATTCTGGGTCGAGAAGATCGTCATGGTGATCGTTTcc                                                                              >  4:250230/1‑149 (MQ=255)                                                                           ggCCTTGCTGATGGGCTTTGTGCTGATGGTCACCTACGGTACCTTCGGCGACGTCCTGCACCTGCTGATGTGGGCGATCATCGGCATCACCTCGCTGTTCCTGAAGATTTTCTGGGTGGCGATGATCGTCATGGTGATCGTTTCCTggg                                                                          <  3:250230/149‑1 (MQ=255)                                                                              cTTGCTGATGGGCTTTGTGCTGATGGTCACCTACGGTACCTTCGGCGACGTCCTGCACCTGCTGATGTGGGCGATCATCGGCATCACCTCGCTGTTCCTGAAGATTTTCTGGGTGGCGATGATCGTCATGGTGATCGTTTCCTGGGTTg                                                                       >  1:145606/1‑149 (MQ=255)                                                                                   tGATGGGCTTTGTGCTGATGGTCACCTACGGTACCTTCGGCGACGTCCTGCACCTGCTGATGTGGGCGATCATCGGCATCACCTCGCTGTTCCTGAAGATTTTCTGGGTGTCGATGATCGTCATGGTGATCGTTTCCTGGGTTGCAcc                                                                   >  7:187845/1‑148 (MQ=255)                                                                                    gATGGGCTTTGTGCTGATGGTCACCTACGGTACCTTCGGCGACGTCCTGCACCTGCTGATGTGGGCGATCATCGGCATCACCTCGCTGTTCCTGAAGATTTTCTGGGTGGCGATGATCGTCATGGTGATCGTTTCCTGGGTTGCAccc                                                                  >  5:280677/1‑148 (MQ=255)                                                                                                  tGATGGTCACCTACGGTACCTTCGGCGACGTCCTGCACCTGCTGATGTGGGCGATCATCGGCATCACCTCGCTGTTCCTGAAGATTTTCTGGGTGGCGATGATCGTCATGGTGATCGTTTCCTGGGTTGCACCCAACAGCCACAACCcg                                                   >  7:192759/1‑149 (MQ=255)                                                                                                    aTGGTCACCTACGGTACCTTCGGCGACGTCCTGCACCTGCTGATGTGGGCGATCATCGGCATCACCTCGCTGTTCCTGAAGATTTTCTGGGTGGCGATGATCGTCATGGTGATCGTTTCCTGGGTTGCACCCAACAGCCACAACCcgg                                                  <  1:104578/148‑1 (MQ=255)                                                                                                               cGGTACCTTCGGCGACGTCCTGCACCTGCTGATGTGGGCGATCATCGGCATCACCTCGCTGTTCCTGAAGATTTTCTGGGTGGCGATGATCGTCATGGTGATCGTTTCCTGGGTTGCACCCAACAGCCACAACCCGGCGGCCGAACTg                                       <  1:237074/148‑1 (MQ=255)                                                                                                                ggTACCTTCGGCGACGTCCTGCACCTGCTGATGTGGGCGATCATCGGCATCACCTCGCTGTTCCTGAAGATTTTCTGGGTGGCGATGATCGTCATGGTGATCGTTTCCTGGGTTGCACCCAACAGCCACAACCCGGCGGCCGAACTGGc                                     >  2:47879/1‑149 (MQ=255)                                                                                                                     cTTCGGCGACGTCCTGCACCTGCTGATGTGGGCGATCATCGGCATCACCTCGCTGTTCCTGAAGATTTTCTGGGTGGCGATGATCGTCATGGTGATCGTTTCCTGGGTTGCACCCAACAGCCACAACCCGGCGGCCGAACTGGCCTAc                                 >  5:239486/1‑148 (MQ=255)                                                                                                                     cTTCGGCGACGTCCTGCACCTGCTGAAGTGGGCGATCATCGGCATCACCTCGCTGTTCCTGAAGATTTTCTGGGTGGCGATGATCGTCATGGTGATCGTTTCCTGGGTTGCCCCCACCAGCCACAACCCGGCGGCAGAACTGGCCTAc                                 >  8:212980/1‑148 (MQ=255)                                                                                                                             aCGTCCTGCACCTGCTGATGTGGGCGATCATCGGCATCACCTCGCTGTTCCTGAAGATTTTCTGGGTGGCGATGATCGTCATgg                                                                                         <  6:127995/84‑1 (MQ=255)                                                                                                                             aCGTCCTGCACCTGCTGATGTGGGCGATCATCGGCATCACCTCGCTGTTCCTGAAGATTTTCTGGGTGGCGATGATCGTCATgg                                                                                         >  5:127995/1‑84 (MQ=255)                                                                                                                                     cACCTGCTGATGTGGGCGATCATCGGCATCACCTCGCTGTTCCTGAAGATTTTCTGGGTGGCGATGATCGTCATGGTGATCGTTTCCTGGGTTGCACCCAACAGCCACAACCCGGCGGCCGAACTGGCCTACCAGATCAGCGAGCCGGt                <  6:281939/149‑1 (MQ=255)                                                                                                                                      aCCTGCTGATGTGGGCGATCATCGGCATCACCTCGCTGTTCCTGAAGATTTTCTGGGTGGCGATGATCGTCATGGTGATCGTTTCCTGGGTTGCACCCAACAGCCACAACCCGGCGGCCGAACTGGCCTACCAGATCAGCGAGCCGGTg               >  3:128666/1‑149 (MQ=255)                                                                                                                                        ctgctgATGTGGGCGATCATCGGCATCACCTCGCTGTTCCTGAAGATTTTCTGGGTGGCGATGATCGTCATGGTGATCGTTTCCTGGGTTGCACCCAACAGCCACAACCCGGCGGCCGAACTGGCCTACCAGATCAGCGAGCCGGTGCt             >  6:249726/1‑149 (MQ=255)                                                                                                                                        ctgctgATGTGGGCGATCATCGGCATCACCTCGCTGTTCCTGAAGATTTTCTGGGTGGCGATGATCGTCATGGTGATCGTTTCCTGGGTTGCACCCAACAGCCACAACCCGGCGGCCGAACTGGCCTACCAGATCAGCGAGCCGGTGCt             >  8:184378/1‑149 (MQ=255)                                                                                                                                              aTGTGGGCGATCATCGGCATCACCTCGCTGTTCCTGAAGATTTTCTGGGTGGCGATGATCGTCATGGTGATCGTTTCCTGGGTTGCACCCAACAGCCACAACCCGGCGGCCGAACTGGCCTACCAGATCAGCGAGCCGGTGCTGgcg         <  1:47879/147‑1 (MQ=255)                                                                                                                                              aTGTGGGCGATCATCGGCATCACCTCGCTGTTCCTGAAGATTTTCTGGGTGGCGATGATCGTCATGGTGATCGTTTCCTGGGTTGCACCCAACAGCCACAACCCGGCGGCCGAACTGGCCTACCAGATCAGCGAGCCGGTGCTGgcg         <  5:249726/147‑1 (MQ=255)                                                                                                                                                   ggCGATCATCGGCATCACCTCGCTGTTCCTGAAGATTTTCTGGGTGGCGATGATCGTCATGGTGATCGTTTCCTGGGTTGCACCCAACAGCCACAACCCGGCGGCCGAACTGGCCTACCAGATCAGCGAGCCGGTGCTGGCGCCGTTcc  <  7:184378/149‑1 (MQ=255)                                                                                                                                                   ggCGATCATCGGCATCACCTCGCTGTTCCTGAAGATTTTCTGGGTGGCGATGATCGTCATGGTGATCGTTTCCTGGGTTGCACCCAACAGCCACAACCCGGCGGCCGAACTGGCCTACCAGATCAGCGAGCCGGTGCTGGCGCCGTTcc  >  8:32555/1‑149 (MQ=255)                                                                                                                                                     |                                                                                                                                                   AAGCCGATCCGCCGGATCATCCCTAGCGTTGGCGGGCTGGATACCTCGTCGCTACTGCTGGCGGTGGTCATCCAGGCCTTGCTGATGGGCTTTGTGCTGATGGTCACCTACGGTACCTTCGGCGACGTCCTGCACCTGCTGATGTGGGCGATCATCGGCATCACCTCGCTGTTCCTGAAGATTTTCTGGGTGGCGATGATCGTCATGGTGATCGTTTCCTGGGTTGCACCCAACAGCCACAACCCGGCGGCCGAACTGGCCTACCAGATCAGCGAGCCGGTGCTGGCGCCGTTCC  >  NC_002947/5819717‑5820011

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.