New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5944028 =	45 (0.920)	3 (0.060)	3/254	NT	6.3%	coding (207/558 nt)	PP_5211	ChaC‑related protein
	?	NC_002947	5944071 =	45 (0.950)					coding (164/558 nt)	PP_5211	ChaC‑related protein

CTCGTTGATCTGGCGCCCGGAGTGCAATTCGGTGGAGCGCCAGCGCGCGCGGGTACATGGCTATCACCGTGGCTTGTACCTGTGGTCCCATGAACATCGCGGTACCCCGGAAACGCCCGGCCTGGTGTTTGGCCTGGACCGCGGTGGTTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5944178‑5944028 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttccGGGGTACCGCGATGTTCATGGGACCACAGGTACAAGCCACGGTGATAGCCATGTACCCGCG‑CGCGCTGGCGCTCCACCGAATTGCACTCCGGGCGCCAGATCAACGAGGCATAGGCAAACAGCCACACAGGCCCGCCCTGGTGCCTGG  >  NC_002947/5944071‑5944218                                                                                                                                                                                                                                                                                                              CTCGTTGATCTGGCGCCCGGAGTGCAATTCGGTGGAGCGCCAGCGCGCGCGGGTACATGGCTATCACCGTGGCTTGTACCTGTGGTCCCATGAACATCGCGGTACCCCGGAAACGCCCGGCCTGGTGTTTGGCCTGGACCGCGGTGGTT                                                                                                                                                         >  7:180671/1‑149                                                                                                          CCCGGAAACGCCCGGCCTGGTGTTTGGCCTGGACCGCGGTGGTTCCGGGGTACCGCGATGTTCATGGGACCACAGGTACAAGCCACGGTGATAGCCATGTACCCGCG‑CGCGCTGGCGCTCCACCGAATTGCACTCCGGGCGCCAGATC                                                >  1:134902/1‑148                                                                                                            CGGAAACGCCCGGCCTGGTGTTTGGCCTGGACCGCGGTGGTTCCGGGGTACCGCGATGTTCATGGGACCACAGGTACAAGCCACGGTGATAGCCATGTACCCGCGCCGCGCTGGCGCTCCACCGAATTGCACTCCGGGCGC                                                      <  1:40970/141‑1                                                                                                            CGGAAACGCCCGGCCTGGTGTTTGGCCTGGACCGCGGTGGTTCCGGGGTACCGCGATGTTCATGGGACCACAGGTACAAGCCACGGTGATAGCCATGTACCCGCG‑CGCGCTGGCGCTCCACCGAATTGCACTCCGGGCGC                                                      >  2:40970/1‑140                                                                                                                                                      CCGGGGTACCGCGATGTTCATGGGACCACAGGTACAAGCCACGGTGATAGCCATGTACCCGCG‑CGCGCTGGCGCTCCACCGAATTGCACTCCGGGCGCCAGATCAACGAGGCATAGGCAAACAGCCACACAGGCCCGCCCTGGTGCCTG   >  4:246228/1‑149                                                                                                                                                       CGGGGTACCGCGATGTTCATTGGACCACAGGTACAAGCCACGGTGATAGCCATGTACCCGCG‑CGCGCTGGCGCTCCACCGAATTGCACTCCGGGCGCCAGATCAACGAGGCATAGGCAAACAGCCACACAGGCCCGCCCTGGTGCCTGG  <  6:269276/149‑1                                                                                                                                                                                                                                                                                                              CTCGTTGATCTGGCGCCCGGAGTGCAATTCGGTGGAGCGCCAGCGCGCGCGGGTACATGGCTATCACCGTGGCTTGTACCTGTGGTCCCATGAACATCGCGGTACCCCGGAAACGCCCGGCCTGGTGTTTGGCCTGGACCGCGGTGGTTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5944178‑5944028 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttccGGGGTACCGCGATGTTCATGGGACCACAGGTACAAGCCACGGTGATAGCCATGTACCCGCG‑CGCGCTGGCGCTCCACCGAATTGCACTCCGGGCGCCAGATCAACGAGGCATAGGCAAACAGCCACACAGGCCCGCCCTGGTGCCTGG  >  NC_002947/5944071‑5944218

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.