| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5945194 = | 52 (1.060) | 4 (0.080) | 4/254 | NT | 8.3% | coding (349/969 nt) | PP_5212 | iron‑sulfur‑binding oxidoreductase |
| ? | NC_002947 | 5945235 = | 38 (0.800) | coding (308/969 nt) | PP_5212 | iron‑sulfur‑binding oxidoreductase | |||||
CTGCATTGCCGAACCGCTGGAGGACTGCGTGTTGCTCTGGGACGGTGTGCTTGCCTTGGGCGAACTGCCAGTGCGCAAGCTGGCGTGCAGCGTCAGTGAGTGCGTCGACGTCGGCGGCGACGTCTGGCGGGTGCGCCTGCGTGCGCCTGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5945345‑5945194‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgACGTCGACGCACTCACTGACGCTGCACGCCAGCTTGCGCACTGGCAGTTCGCCCAAGGCAAGCACACCGTCCCAGAGCAACACGCAGTCCTCCAGCGGTTCGGCAATGCAGGTGAA > NC_002947/5945235‑5945350 CTGCATTGCCGAACCGCTGGAGGACTGCGTGTTGCTCTGGGACGGTGTGCTTGCCTTGGGCGAACTGCCAGTGCGCAAGCTGGCGTGCAGCGTCAGTGAGTGCGTCGACGTCGGCGGCGACGTCTGGCGGGTGCGCCTGCGTGCGCCTG > 4:137541/1‑149CTGCATTGCCGAACCGCTGGAGGACTGCGTGTTGCTCTGGGACGGTGTGCTTGCCTTGGGCGAACTGCCAGTGCGCAAGCTGGCGTGCAGCGTCAGTGAGTGCGTCGACGTCGGCGGCGACGTCTGGCGGGTGCGCCTGCGTGCGCCTG > 5:101130/1‑149CTGCATTGCCGAACCGCTGGAGGACTGCGTGTTGCTCTGGGACGGTGTGCTTGCCTTGGGCGAACTGCCAGTGCGCAAGCTGGCGTGCAGCGTCAGTGAGTGCGTCGACGTCGGCGGCGACGTCTGGCGGGTGCGCCTGCGTGCGCCTG > 6:173996/1‑149 CGCTGGAGGACTGCGTGTTGCTCTGGGACGGTGTGCTTGCCTTGGGCGAACTGCCAGTGCGCAAGCTGGCGTGCAGCGTCAGTGAGTGCGTCGACGTCGGCGGCGACGTCTGGCGGGTGCGCCTGCGTGCGCCTGCCG > 5:149284/1‑138 CGCTGGAGGACTGCGTGTTGCTCTGGGACGGTGTGCTTGCCTTGGGCGAACTGCCAGTGCGCAAGCTGGCGTGCAGCGTCAGTGAGTGCGTCGACGTCGGCGGCGACGTCTGGCGGGTGCGCCTGCGTGCGCCTGCCG < 6:149284/138‑1 GTCGACGTCGGCGGCGACGTCTGGCGGGTGCGCCTGCGTGCGCCTGCCGACGTCGACGCACTCACTGACGCTGCACGCCAGCTTGCGCACTGGCAGTTCGCCCAAGGCAAGCACACCGTCCCAGAGCAACACGCAGTCCTCCAGCGGTT > 4:128134/1‑149 TCGACGTCGGCGGCGACGTCTGGCGGGTGCGCCTGCGTGCGCCTGCCGACGTCGACGCACTCACTGACGCTGCACGCCAGCTTGCGCACTGGCAGTTCGCCCAAGGCAAGCACACCGTCCCAGAGCAACACGCAGTCCTCCAG < 5:116966/143‑1 TCGACGTCGGCGGCGACGTCTGGCGGGTGCGCCTGCGTGCGCCTGCCGACGTCGACGCACTCACTGACGCTGCACGCCAGCTTGCGCACTGGCAGTTCGCCCAAGGCAAGCACACCGTCCCAGAGCAACACGCAGTCCTCCAG > 6:116966/1‑143 ACGTCTGGCGGGTGCGCCTGCGTGCGCCTGCCGACGTCGACGCACTCACTGACGCTGCACGCCAGCTTGCGCACTGGCAGTTCGCCCAAGGCAAGCACACCGTCCCAGAGCAACACGCAGTCCTCCAGCGGTTCGGCAATGCAGGTGAA < 3:128134/149‑1 CTGCATTGCCGAACCGCTGGAGGACTGCGTGTTGCTCTGGGACGGTGTGCTTGCCTTGGGCGAACTGCCAGTGCGCAAGCTGGCGTGCAGCGTCAGTGAGTGCGTCGACGTCGGCGGCGACGTCTGGCGGGTGCGCCTGCGTGCGCCTGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5945345‑5945194‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgACGTCGACGCACTCACTGACGCTGCACGCCAGCTTGCGCACTGGCAGTTCGCCCAAGGCAAGCACACCGTCCCAGAGCAACACGCAGTCCTCCAGCGGTTCGGCAATGCAGGTGAA > NC_002947/5945235‑5945350 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |