New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 6054874 | 37 (0.760) | 3 (0.060) | 3/252 | NT | 8.0% | coding (252/429 nt) | exbD | TonB‑gated outer membrane transporter gating inner membrane protein |
? | NC_002947 | = 6054909 | 33 (0.700) | coding (287/429 nt) | exbD | TonB‑gated outer membrane transporter gating inner membrane protein |
ATGGTCGCCGCTCCCTTGGCTACGGTCGACATCAAGGTCGACCTGCCGGCCTCAACCGCCAAACCGGCGCCAAGGCCGGAGAAACCGGTGTTCGTCAGCGTCAAGGCCGACCAGAAGCTGTATGTCGGCGACGATCAGGTTGCTGCACCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/6054725‑6054874 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cacccTTGGTCTTGGCGTCGAGCATCGGGCCAAGCTGGTCGGGTGCAGCAACCTGATCGTCGCCGACATACAGCTTCTGGTCGGCCTTGACGCTGACGAACACCGGTTTCTCCGGCCTTGGCGCCGGTTTGGCGGTTGAGGCCGGCAGGTCG < NC_002947/6054909‑6054763 ATGGTCGCCGCTCCCTTGGCTACGGTCGACATCAAGGTCGACCTGCCGGCCTCAACCGCCAAACCGGCGCCAAGGCCGGAGAAACCGGTGTTCGTCAGCTTCAAGGCCGACCAGAAGCTGTATTTCGGCGACGATCAGGTTGCTGCACC < 6:294448/149‑1 GGCCGCAACCTCCAAACCGGCGCCAAGGCCGGAGAAACCGGTGTTCGTCAGCGTCAAGGCCGACCAGAAGCTGTATGTCGGCGACGATCAGGTTGCTGCACCCTTGGTCTTGGCGTCGAGCATCGGGCCAAGCTGGTCGGGTGCAGCAA < 4:32885/149‑1 AAGGCCGGAGAAACCGGTGTTCGTCAGCGTCAAGGCCGACCAGAAGCTGTATGTCGGCGACGATCAGGTTGCTGCACCCTTGGTCTTGGCGTCGAGCATCGGGCCAAGCTGGTCGGGTGCAG < 5:141542/122‑1 AAGGCCGGAGAAACCGGTGTTCGTCAGCGTCAAGGCCGACCAGAAGCTGTATGTCGGCGACGATCAGGTTGCTGCACCCTTGGTCTTGGCGTCGAGCATCGGGCCAAGCTGGTCGGGTGCAG > 6:141542/1‑122 ACCCTTGGTCTTGGCGTCGAGCATCGGGCCAAGCTGGTCGGGTGCAGCAACCTGATCGTCGCCGACATACAGCTTCTGGTCGGCCTTGACGCTGACGAACACCGGTTTCTCCGGCCTTGGCGCCGGTTTGGCGGTTGAGGCCGGCAGGT > 5:112908/1‑149 CCTTGGTCTTGGCGTCGAGCATCGGGCCAAGCTGGTCGGGTGCAGCAACCTGATCGTCGCCGACATACAGCTTCTGGTCGGCCTTGACGCTGACGAACACCGGTTTCTCCGGCCTTGGCGCCGGTTTGGCGGTTGAGGCCGGCAGGTCG > 4:59713/1‑149 ATGGTCGCCGCTCCCTTGGCTACGGTCGACATCAAGGTCGACCTGCCGGCCTCAACCGCCAAACCGGCGCCAAGGCCGGAGAAACCGGTGTTCGTCAGCGTCAAGGCCGACCAGAAGCTGTATGTCGGCGACGATCAGGTTGCTGCACCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/6054725‑6054874 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cacccTTGGTCTTGGCGTCGAGCATCGGGCCAAGCTGGTCGGGTGCAGCAACCTGATCGTCGCCGACATACAGCTTCTGGTCGGCCTTGACGCTGACGAACACCGGTTTCTCCGGCCTTGGCGCCGGTTTGGCGGTTGAGGCCGGCAGGTCG < NC_002947/6054909‑6054763 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |