New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 6054874	37 (0.760)	3 (0.060)	3/252	NT	8.0%	coding (252/429 nt)	exbD	TonB‑gated outer membrane transporter gating inner membrane protein
	?	NC_002947	= 6054909	33 (0.700)					coding (287/429 nt)	exbD	TonB‑gated outer membrane transporter gating inner membrane protein

CGACCTGCCGGCCTCAACCGCCAAACCGGCGCCAAGGCCGGAGAAACCGGTGTTCGTCAGCGTCAAGGCCGACCAGAAGCTGTATGTCGGCGACGATCAGGTTGCTGCACCCGACCAGCTTGGCCCGATGCTCGACGCCAAGACCAAGGGTGACAAGGAAACCACCATCTTTTTCCAGGCTGACAAAGGCGTGGATTACGGCGACCTGATGGAAGTGATGAACAACATGCGCGCGGCCGGCTACCTGAAAGTCGGTCTGGTAGGTCTCGAGACGGCAGCCAAGAAATGATGA  >  NC_002947/6054763‑6055054                                                                                                                                                   |                                                                                                                                                  cGACCTGCCGGCCTCAACCGCCAAACCGGCGCCAAGGCCGGAGAAACCGGTGTTCGTCAGCGTCAAGGCCGACCAGAAGCTGTATGTCGGCGACGATCAGGTTGCTGCACCCGACCAGCTTGGCCCGATGCTCGACGCCAAGACCAAgg                                                                                                                                                 >  4:59713‑M2/1‑147 (MQ=255)   aCCTGCCGGCCTCAACCGCCAAACCGGCGCCAAGGCCGGAGAAACCGGTGTTCGTCAGCGTCAAGGCCGACCAGAAGCTGTATGTCGGCGACGATCAGGTTGCTGCACCCGACCAGCTTGGCCCGATGCTCGACGCCAAGACCAAgggt                                                                                                                                               >  5:112908‑M2/1‑145 (MQ=255)        ccGGCCTCAACCGCCAAACCGGCGCCAAGGCCGGAGAAACCGGTGTTCGTCAGCGTCAAGGCCGACCAGAAGCTGTATGTCGGCGACGATCAGGTTGCTGCACCCGACCAGCTTGGCCCGATGCTCGACGCCAAGACCaa                                                                                                                                                   >  1:123362/1‑140 (MQ=255)        ccGGCCTCAACCGCCAAACCGGCGCCAAGGCCGGAGAAACCGGTGTTCGTCAGAGTCAAGGCCGACCAGAAGCTGTATGTCGGCGACGATCAGGTTGCTGCACCCGACCAGCTTGGCCCGATGCTCGACGCCAAGACCAAGGGTGACaa                                                                                                                                          <  7:44148/149‑1 (MQ=255)          ggCCTCAACCGCCAAACCGGCGCCAAGGCCGGAGAAACCGGTGTTCGTCAGCGTCAAGGCCGACCAGAAGCTGTATGTCGGCGACGATCAGGTTGCTGCACCCGACCAGCTTGGCCCGATGCTCGACGCCAAGACCAAGGGTGACAAgg                                                                                                                                        <  7:6172/149‑1 (MQ=255)            ccTCAACCGCCAAACCGGCGCCAAGGCCGGAGAAACCGGTGTTCGTCAGCGTCAAGGCCGACCAGAAGCTGTATGTCGGCGACGATCAGGTTGCTGCACCCGACCAGCTTGGCCCGATGCTCGACGCCAAGACCAAGGGTGACAAGGa                                                                                                                                       >  8:165067/1‑148 (MQ=255)                aaCCGCCAAACCGGCGCCAAGGCCGGAGAAACCGGTGTTCGTCAGCGTCAAGGCCGACCAGAAGCTGTATGTCGGCGACGATCAGGTTGCTGCACCCGACCAGCTTGGCCCGATGCTCGACGCCAAGACCAAGGGTGACAAg                                                                                                                                         >  2:216386/1‑142 (MQ=255)                aaCCGCCAAACCGGCGCCAAGGCCGGAGAAACCGGTGTTCGTCAGCGTCAAGGCCGACCAGAAGCTGTATGTCGGCGACGATCAGGTTGCTGCACCCGACCAGCTTGGCCCGATGCTCGACGCCAAGACCAAGGGTGACAAg                                                                                                                                         <  1:216386/142‑1 (MQ=255)                            ggCGCCAAGGCCGGAGAAACCGGTGTTCGTCAGCGTCAAGGCCGACCAGAAGCTGTATGTCGGCGACGATCAGGTTGCTGCACCCGACCAGCTTGGCCCGATGCTCGACGCCAAGACCAAGGGTGACAAGGAAACCACCATCTTTTTcc                                                                                                                      <  8:178448/149‑1 (MQ=255)                             gcgcCAAGGCCGGAGAAACCGGTGTTCGTCAGCGTCAAGGCCGACCAGAAGCTGTATGTCGGCGACGATCAGGTTGCTGCACCCGACCAGCTTGGCCCGATGCTCGACGCCAAGACCAAGGGTGACAAGGAAACCACCATCTTTTTCCa                                                                                                                     <  2:134407/149‑1 (MQ=255)                                              aCCGGTGTTCGTCAGCGTCAAGGCCGACCAGAAGCTGTATGTCGGCGACGATCAGGTTGCTGCACCCGACCAGCTTGGCCCGATGCTCGACGCCAAGACCAAGGGTGACAAGGAAACCACCATCTTTTTCCAGGCTGACAAAGGCGTg                                                                                                     >  4:23454/1‑148 (MQ=255)                                                     ttCGTCAGCGTCAAGGCCGACCAGAAGCTGTATGTCGGCGACGATCAGGTTGCTGCACCCGACCAGCTTGGCCCGATGCTCGACGCCAAGACCAAGGGTGACAAGGAAACCACCATCTTTTTCCAGGCTGACAAAGACGTGGATTACgg                                                                                             <  5:92171/149‑1 (MQ=255)                                                           aGCGTCAAGGCCGACCAGAAGCTGTATGTCGGCGACGATCAGGTTGCTGCACCCGACCAGCTTGGCCCGATGCTCGACGCCAAGACCAAGGGTGACAAGGAAACCACCATCTTTTTCCAGGCTGACAAAGGCGTGGATTACGGCGACCt                                                                                       <  3:23454/149‑1 (MQ=255)                                                              gTCAAGGCCGACCAGAAGCTGTATGTCGGCGACGATCAGGTTGCTGCACCCGACCAGCTTGGCCCGATGCTCGACGCCAAGACCAAGGGTGACAAGGAAACCACCATCTTTTTCCAGGCTGACAAAGGCGTGGATTACGGCGACCTGAt                                                                                    <  7:165067/149‑1 (MQ=255)                                                              gTCAAGGCCGACCAGAAGCTGTATGTCGGCGACGATCAGGTTGCTGCACCCGACCAGCTTGGCCCGATGCTCGACGCCAAGACCAAGGGTGACAAGGAAACCACCATCTTTTTCCAGGCTGACAAAGGCGTGGATTACGGCGACCTGAt                                                                                    <  5:690/149‑1 (MQ=255)                                                               tCAAGGCCGACCAGAAGCTGTATGTCGGCGACGATCAGGTTGCTGCACCCGACCAGCTTGGCCCGATGCTCGACGCCAAGACCAAGGGTGACAAGGAAaccac                                                                                                                                 >  6:17681/1‑103 (MQ=255)                                                                 aaGGCCGACCAGAAGCTGTATGTCGGCGACGATCAGGTTGCTGCACCCGACCAGCTTGGCCCGATGCTCGACGCCAAGACCAAGGGTGACAAGGAAACCACCATCTTTTTCCAGGCTGACAAAg                                                                                                          >  6:89556/1‑124 (MQ=255)                                                                 aaGGCCGACCAGAAGCTGTATGTCGGCGACGATCAGGTTGCTGCACCCGACCAGCTTGGCCCGATGCTCGACGCCAAGACCAAGGGTGACAAGGAAACCACCATCTTTTTCCAGGCTGACAAAg                                                                                                          <  5:89556/124‑1 (MQ=255)                                                                         ccAGAAGCTGTATGTCGGCGACGATCAGGTTGCTGCACCCGACCAGCTTGGCCCGATGCTCGACGCCAAGACCAAGGGTGACAAGGAAACCACCATCTTTTTCCAGGCTGACAAAGGCGTGGATTACGGCGACCTGATGGAAGtgatg                                                                          >  3:139380/1‑148 (MQ=255)                                                                          cAGAAGCTGTATGTCGGCGACGATCAGGTTGCTGCACCCGACCAGCTTGGCCCGATGCTCGACGCCAAGACCAAGGGTGACAAGGAAACCACCATCTTTTTCCAGGCTGACAAAGGCGTGGATTACGGCGACCTGATGGAAGTGATGaa                                                                        <  4:139380/149‑1 (MQ=255)                                                                           aGAAGCTGTATGTCGGCGACGATCAGGTTGCTGCACCCGACCAGCTTGGCCCGATGCTCGACGCCAAGACCAAGGGTGACAAGGAAACCACAATCTTTTTCCAGGCTGACAAAGGCGTGGATTACGGCGACCTGATGGAAGTGATGaa                                                                        >  8:287063/1‑148 (MQ=255)                                                                                   tATGTCGGCGACGATCATGTTGCTTCACCCGACCATCTTGGCCCGATGCTCGACGCCAAGACCAAGGGTGACAAGGAAATCACCATCTTTTTCCAGGCTGACAAATGCGTGGATTACGGCGACCTTATGGAAGTGATGAACAACATg                                                                 <  7:140265/147‑1 (MQ=255)                                                                                        cGGCGACGATCAGGTTGCTGCACCCGACCAGCTTGGCCCGATGCTCGACGCCAAGACCAAGGGTGACAAGGAAACCACCATCTTTTTCCAGGCTGACAAAGGCGTGGATTACGGCGACCTGATGGAAGTGATGAACAACATGCGCGcgg                                                          >  7:226734/1‑149 (MQ=255)                                                                                                      ttGCTGCACCCGACCAGCTTGGCCCGATGCTCGACGCCAAGACCAAgggtgcagcaacctgatcgtcgccgacatacagcttctggtcggccttgacgctgacgaacaccggtttctccggccttggcgccggtttggaggttgcggcc                                            <  4:32885‑M2/149‑104 (MQ=255)                                                                                                         ctgcACCCGACCAGCTTGGCCCGATGCTCGACGCCAAGACCAAgggtgcagcaacctgatcgtcgccgacatacagcttctggtcggccttgacgctgacgaacaccggtttctccggcctt                                                                    >  6:141542‑M2/1‑43 (MQ=255)                                                                                                         ctgcACCCGACCAGCTTGGCCCGATGCTCGACGCCAAGACCAAgggtgcagcaacctgatcgtcgccgacatacagcttctggtcggccttgacgctgacgaacaccggtttctccggcctt                                                                    <  5:141542‑M2/122‑80 (MQ=255)                                                                                                           gcACCCGACCAGCTTGGCCCGATGCTCGACGCCAAGACCAAGGGTGACAAGGAAACCACCATCTTTTTCCAGGCTGACAAAGGCGTGGATTACGGCGACCTGATGGAAGTGATGAACAACATGCGCGCGGCCGGCTACCTGAAAGTCg                                        <  3:12260/148‑1 (MQ=255)                                                                                                           gcACCCGACCAGCTTGGCCCGATGCTCGACGCCAAGACCAAGGGTGACAAGGAAACCACCATCTTTTTCCAGGCTGACAAAGGCGTGGATTACGGCGACCTGATGGAAGTGATGAACAACATGCGCGCGGCCGGCTACCTGAAAGTCg                                        >  4:12260/1‑148 (MQ=255)                                                                                                               ccGACCAGCTTGGCCCGATGCTCGACGCCAAGACCAAGGGTGACAAGGAAACCACCATCTTTTTCCAGGCTGACAAAGGCGTGGATTACGGCGACCTGATGGAAGTGATGAACAACATGCGCGCGGCCGGCTACCTGAAAGTCGGTCTg                                   >  8:142888/1‑149 (MQ=255)                                                                                                               ccGACCAGCTTGGCCCGATGCTCGACGCCAAGACCAAGGGTGACAAGGAAACCACAATCTTTTTCCAGGCTGACAAAGGCGTGGATTACGGCGACCTGATGGAAGTGATGAACAACATGCGCGCGGCCGGCTACCTGAAAGTCGGTCTg                                   >  6:73288/1‑149 (MQ=255)                                                                                                                   ccAGCTTGGCCCGATGCTCGACGCCAAGACCAAGGGTGACAAGGAAACCACCATCTTTTTCCAGGCTGACAAAGGCGTGGATTACGGCGACCTGATGGAAGTGATGAACAACATGCGCGCGGCCGGCTACCTGAAAGTCGGTCTGGTAg                               <  4:171047/149‑1 (MQ=255)                                                                                                                          ggCCCGATGCTCGACGCCAAGACCAAGGGTGACAAGGAAACCACCATCTTTTTCCAGGCTGACAAAGGCGTGGATTACGGCGACCTGATGGAAGTGATGAACAACATGCGCGCGGCCGGCTACCTGAAAGTCGGTCTGGTAGGtctc                          >  6:311604/1‑147 (MQ=255)                                                                                                                           gCCCGATGCTCGACGCCAAGACCAAGGGTGACAAGGAAACCACCATCTTTTTCCAGGCTGACAAAGGCGTGGATTACGGCGACCTGATGGAAGTGATGAACAACATGCGCGCGGCCGGCTACCTGAAAGTCGGTCTGGTAGGtctc                          >  8:208117/1‑146 (MQ=255)                                                                                                                           gCCCGATGCTCGACGCCAAGACCAAGGGTGACAAGGAAACCACCATCTTTTTCCAGGCTGACAAAGGCGTGGATTACGGCGACCTGATGGAAGTGATGAACAACATGCGCGCGGCCGGCTACCTGAAAGTCGGTCTGGTAGGTCTCga                        <  8:226734/148‑1 (MQ=255)                                                                                                                                    tCGACGCCAAGACCAAGGGTGACAAGGAAACCACCATCTTTTTCCAGGCTGACAAAGGCGTGGATTACGGCGACCTGATGGAAGTGATGAACAACATGCGCGCGGCCGGCTAcc                                                 <  3:57883/114‑1 (MQ=255)                                                                                                                                    tCGACGCCAAGACCAAGGGTGACAAGGAAACCACCATCTTTTTCCAGGCTGACAAAGGCGTGGATTACGGCGACCTGATGGAAGTGATGAACAACATGCGCGCGGCCGGCTAcc                                                 >  4:57883/1‑114 (MQ=255)                                                                                                                                    tCGACGCCAAGACCAAGGGTGACAAGGAAACCACCATCTTTTTCCAGGCTGACAAAGGCGTGGATTACGGCGACCTGATGGAAGTGATGAACAACATGCGCGCGGCCGGCTACCTGAAAGTCGGTCTGGTAGGTCTCgag                       >  4:266946/1‑140 (MQ=255)                                                                                                                                    tCGACGCCAAGACCAAGGGTGACAAGGAAACCACCATCTTTTTCCAGGCTGACAAAGGCGTGGATTACGGCGACCTGATGGAAGTGATGAACAACATGCGCGCGGCCGGCTACCTGAAAGTCGGTCTGGTAGGTCTCgag                       <  3:266946/140‑1 (MQ=255)                                                                                                                                      gACGCCAAGACCAAGGGTGACAAGGAAACCACCATCTTTTTCCAGGCTGACAAAGGCGTGGATTACGGCGACCTGATGGAAGTGATGAACAACATGCGCGCGGCCGGCTACCTGAAAGTCGGTCTGGTAGGTCTCGAGACGGCAGcc              >  5:231103/1‑147 (MQ=255)                                                                                                                                          ccAAGACCAAGGGTGACAAGGAAACCACCATCTTTTTCCAGGCTGACAAAGGCGTGGATTACGGCGACCTGATGGAAGTGATGAACAACATGCGCGCGGCCGGCCACCTGAAAGTCGGTCTGGTAGGTCTCGAGACGGCAGCCAAGaaa        >  1:71270/1‑149 (MQ=255)                                                                                                                                           cAAGACCAAGGGTGACAAGGAAACCACCATCTTTTTCCAGGCTGACAAAGGCGTGGATTACGGCGACCTGATGGAAGTGATGAACAACATGCGCGCGGCCGGCTACCTGAAAGTCGGTCTGGTAGGTCTCGAGACGGCAGCCAAGAAat       <  7:142888/149‑1 (MQ=255)                                                                                                                                            aaGACCAAGGGTGACAAGGAAACCACCATCTTTTTCCAGGCTGACAAAGGCGTGGATTACGGCGACCTGATGGAAGTGATGAACAACATGCGCGCGGCCGGCCACCTGAAAGTCGGTCTGGTAGGTCTCGAGACGGCAGCCAAGAAatg      <  2:71270/149‑1 (MQ=255)                                                                                                                                                 cAAGGGTGACAAGGAAACCACCATCTTTTTCCAGGCTGACAAAGGCGTGGATTACGGCGACCTGATGGAAGTGATGAACAACATGCGCGCGGCCGGCTACCTGAAAGTCGGTCTGGTAGGTCTCGAGACGGCAGCCAAGAAAtgatga  >  1:284670/1‑148 (MQ=255)                                                                                                                                                   |                                                                                                                                                  CGACCTGCCGGCCTCAACCGCCAAACCGGCGCCAAGGCCGGAGAAACCGGTGTTCGTCAGCGTCAAGGCCGACCAGAAGCTGTATGTCGGCGACGATCAGGTTGCTGCACCCGACCAGCTTGGCCCGATGCTCGACGCCAAGACCAAGGGTGACAAGGAAACCACCATCTTTTTCCAGGCTGACAAAGGCGTGGATTACGGCGACCTGATGGAAGTGATGAACAACATGCGCGCGGCCGGCTACCTGAAAGTCGGTCTGGTAGGTCTCGAGACGGCAGCCAAGAAATGATGA  >  NC_002947/6054763‑6055054

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.