New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 354589	49 (1.000)	3 (0.060)	3/254	NT	6.2%	coding (583/846 nt)	cbcW	choline/betaine/carnitine ABC transporter permease
	?	NC_002947	= 354615	43 (0.910)					coding (557/846 nt)	cbcW	choline/betaine/carnitine ABC transporter permease

CGTTGACCACAGGTTTGCCCAGGCCATCAGCGCCAACCAGGGCGGCAATGACCACC‑ATCGACAGCGACAGCATGATGCATTGAGTGACACCGGCGGCGATGCTTGGCATCGCGTGCGGCAGTTCGATACGGGTAAGCAGCTGACGACGCGAGCAGCCAAAGGCCTTGCCGGCGTCCATCAACTCTTGCGGCACGTCGCAGATGCCCAGGTAGGTCAGGCGAATGGGCGCAGCAATGGCGAACACCACGGTGGAGATCAGCCCCGGCACCACGCCCAGGCCGAACAGGGTCAG  >  NC_002947/354445‑354736                                                                                                                                                  |                                                                                                                                                    cGTTGACCACAGGTTTGCCCAGGCCATCAGCGCCAACCAGGGCGGCAATGACCACC‑ATCGACAGCGACAGCATGATGCATTGAGTGACACCGGCGGCGATGCTTGGCATCGCGTGCGGCAGTTCGATACGGGTAAGCAGCTGACGAcgc                                                                                                                                                 <  6:179582/149‑1 (MQ=255)       ccACAGGTTTGCCCAGGCCATCAGCGCCAACCAGGGCGGCAATGACCACC‑ATCGACAGCGACAGCATGATGCATTGAGTGACACCGGCGGCGATGCTTGGCATCGCGTGCGGCAGTTCGATACGGGTAAGCAGCTGACGACGCGa                                                                                                                                               <  1:92503/145‑1 (MQ=255)       ccACAGGTTTGCCCAGGCCATCAGCGCCAACCAGGGCGGCAATGACCACC‑ATCGACAGCGACAGCATGATGCATTGAGTGACACCGGCGGCGATGCTTGGCATCGCGTGCGGCAGTTCGATACGGGTAAGCAGCTGACGACGCGa                                                                                                                                               >  2:92503/1‑145 (MQ=255)        cacaGGTTTGCCCAGGCCATCAGCGCCAACCAGGGCGGCAATGACCACC‑ATCGACAGCGACAGCATGATGCATTGAGTGACACCGGCGGCGATGCTTGGCATCGCGTGCGGCAGTTCGATACGGGTAAGCAGCTGACGACGCGagcagc                                                                                                                                          >  8:144259/1‑149 (MQ=255)             gTTTGCCCAGGCCATCAGCGCCAACCAGGGCGGCAATGACCACC‑ATCGACAGCGACAGCATGATGCATTGAGTGACACCGGCGGCGATGCTTGGCATCGCGTGCGGCAGTTCGATACGGGTAAGCAGCTGACGACGCGAGCAGCCAAAg                                                                                                                                     >  8:126634/1‑149 (MQ=255)                 gCCCAGGCCATCAGCGCCAACCAGGGCGGCAATGACCACC‑ATCGACAGCGACAGCATGATGCATTGAGTGACACCGGCGGCGATGCTTGGCATCGCGTGCGGCAGTTCGATACGGGTAAGCAGCTGACGACGCGAGCAGCCAAAGGcc                                                                                                                                  <  2:142713/148‑1 (MQ=255)                  cccAGGCCATCAGCGCCAACCAGGGCGGCAATGACCACC‑ATCGACAGCGACAGCATGATGCATTGAGTGACACCGGCGGCGATGCTTGGCATCGCGTGCGGCAGTTCGATACGGGTAAGCAGCTGACGACGCGAGCAGCCAAAGGCCtt                                                                                                                                <  7:144259/149‑1 (MQ=255)                   ccAGGCCATCAGCGCCAACCAGGGCGGCAATGACCACC‑ATCGACAGCGACAGCATGATGCATTGAGTGACACCGGCGGCGATGCTTGGCATCGCGTGCGGCAGTTCGATACGGGTTAGCAGCTGACGACGCGagca                                                                                                                                            <  7:133543/136‑1 (MQ=255)                   ccAGGCCATCAGCGCCAACCAGGGCGGCAATGACCACC‑ATCGACAGCGACAGCATGATGCATTGAGTGACACCGGCGGCGATGCTTGGCATCGCGTGCGGCAGTTCGATACGGGTTAGCAGCTGACGACGCGagca                                                                                                                                            >  8:133543/1‑136 (MQ=255)                    cAGGCCATCAGCGCCAACCAGGGCGGCAATGACCACCGATCGACAGCGAAAGAATGATCCATTGAGTGACACCGGCGGCGATGCTTGGCAGCGCGTGCGGCAGTGCGATACGGGTAAGCAGCTGACGACGCGAGCAGCCAAAGGCCTTg                                                                                                                               >  1:54101/1‑149 (MQ=255)                         cATCAGCGCCAACCAGGGCGGCAATGACCACC‑ATCGACAGCGACAGCATGATGCATTGAGTGACACCGGCGGCGATGCTTGGCATCGCGTGCGGCAGTTCGATACGGGTAAGCAGCTGACGACGCGAGCAGCCAAAGGCCTTGCCGGcg                                                                                                                         <  3:295914‑M2/149‑3 (MQ=255)                           tCAGCGCCAACCAGGGCGGCAATGACCACC‑ATCGACAGCGACAGCATGATGCATTGAGTGACACCGGCGGCGATGCTTGGCATCGCGTGCGGCAGTTCGATACGGGTAAGCAGCTGACGACGCGAGCAGCCAAAGGCCTTGCCGGcgtc                                                                                                                       >  7:126634‑M2/1‑145 (MQ=255)                                gcCAACCAGGGCGGCAATGACCACC‑ATCGACAGCGACAGCATGATGCATTGAGTGACACCGGCGGCGATGCTTGGCATCGCGTGCGGCAGTTCGATACGGGTAAGCAGCTGACGccggcaaggcctttggctgctcgcgtcgtcagc                                                                                                                    >  6:195317‑M1/1‑114 (MQ=255)                                gcCAACCAGGGCGGCAATGACCACC‑ATCGACAGCGACAGCATGATGCATTGAGTGACACCGGCGGCGATGCTTGGCATCGCGTGCGGCAGTTCGATACGGGTAAGCAGCTGACGccggcaaggcctttggctgctcgcgtcgtcagc                                                                                                                    <  5:195317‑M1/147‑34 (MQ=255)                                gacAACCAGGTCGTCAATGACCACC‑ATCGACAGCGACAGCATGATGCATTGAGTGACACCGGCGGCGATGCTTGGCATCGCGTGCGGCAGTTCGATACGGGTAAGCAGCTGACGACGCGAGCAGCCAAAGGCCTTGCCGGCGTCCATc                                                                                                                   <  8:175930/146‑1 (MQ=255)                                  cAACCAGGGCGGCAATGACCACC‑AGCGACAGCGACAGCATGATGCATTGAGTGACACCGGCGGCGATGCTTGGCATCGCGTGCGGCAGTTCGATACGGGTAAGCAGCTGACGACGCGAGCAGCCAAAGGCCTTGCCGGCGTCCATCAAc                                                                                                                <  4:254022/149‑1 (MQ=255)                                   aaCCAGGGCGGCAATGACCACC‑ATCGACAGCGACAGCATGATGCATTGAGTGACACCGGCGGCGATGCTTGGCATCGCGTGCGGCAGTTCGATACGGGTAAGCAGCTGACGACGCGAGCAGCCAAAGGCCTTGCCGGCGTCGATCAAct                                                                                                               >  5:143097/1‑149 (MQ=255)                                   aaCCAGCTCGGCAATGACCACC‑AACGACAGCGACAGCAAGATGCATTGACTGACACCGGCGGCGATGCTTGGCATCGCGTGCGGCAGTTCGATACGGGTAAGCACCTGACGccggcaaggcctttggctgctcgcgtcgtcagctgctt                                                                                                               <  5:309798‑M1/149‑39 (MQ=255)                                      cAGGGCGGCAATGACCACC‑ATCGACAGCGACAGCATGATGCATTGAGTGACACCGGCGGCGATGCTTGGCATCGCGTGCGGCAGTTCGATACGGGTAAGCAGCTGACGACGCGAGCAGCCAAAGGCCTTGcc                                                                                                                             <  6:114722/132‑1 (MQ=255)                                      cAGGGCGGCAATGACCACC‑ATCGACAGCGACAGCATGATGCATTGAGTGACACCGGCGGCGATGCTTGGCATCGCGTGCGGCAGTTCGATACGGGTAAGCAGCTGACGACGCGAGCAGCCAAAGGCCTTGcc                                                                                                                             >  5:114722/1‑132 (MQ=255)                                      cAGGGCGGCAATGACCACC‑ATCGACAGCGACAGCATGATGCATTGAGTGACACCGGCGGCGATGCTTGGCATCGCGTGCGGCAGTTCGATACGGGTAAGCAGCTGACGACGCGAGCAGCCAAAGGCCTTGCCGGc                                                                                                                          <  1:154993‑M2/135‑2 (MQ=255)                                      cAGGGCGGCAATGACCACC‑ATCGACAGCGACAGCATGATGCATTGAGTGACACCGGCGGCGATGCTTGGCATCGCGTGCGGCAGTTCGATACGGGTAAGCAGCTGACGACGCGAGCAGCCAAAGGCCTTGCCGGc                                                                                                                          >  2:154993‑M2/1‑134 (MQ=255)                                            ggcAATGACCACC‑ATCGACAGCGACAGCATGATGCATTGAGTGACACCGGCGGCGATGCTTGGCATCGCGTGCGGCAGTTCGATACGGGTAAGCAGCTGACGACGCGAGCAGCCAAAGGCCTTGCCGGCGTCCATCAACTCTTGCGGCa                                                                                                      <  2:54101/149‑1 (MQ=255)                                             gcAATGACCACC‑ATCGACAGCGACAGCATGATGCATTGAGTGACACCGGCGGCGATGCTTGGCATCGCGTGCGGCAGTTCGATACGGGTAAGCAGCTGACGACGCGAGCAGCCAAAGGCCTTGCCGGCGTCCATCAACTCTTGc                                                                                                          >  6:276108/1‑144 (MQ=255)                                             gcAATGACCACC‑ATCGACAGCGACAGCATGATGCATTGAGTGACACCGGCGGCGATGCTTGGCATCGCGTGCGGCAGTTCGATACGGGTAAGCAGCTGACGACGCGAGCAGCCAAAGGCCTTGCCGGCGTCCATCAACTCTTGc                                                                                                          <  5:276108/144‑1 (MQ=255)                                                  gACCACC‑ATCGACAGCGACAGCATGATGCATTGAGTGACACCGGCGGCGATGCTTGGCATCGCGTGCGGCAGTTCGATACGGGTAAGCAGCTGACGACGCGAGCAGCCAAAGGCCTTGCCg                                                                                                                            >  7:273142/1‑121 (MQ=255)                                                  gACCACC‑ATCGACAGCGACAGCATGATGCATTGAGTGACACCGGCGGCGATGCTTGGCATCGCGTGCGGCAGTTCGATACGGGTAAGCAGCTGACGACGCGAGCAGCCAAAGGCCTTGCCg                                                                                                                            <  8:273142/121‑1 (MQ=255)                                                  gACCACC‑ATCGACAGCGACAGCATGATGCATTGAGTGACACCGGCGGCGATGCTTGGCATCGCGTGCGGCAGTTCGATACGGGTAAGCAGCTGACGACGCGAGCAGCCAAAGGCCTTGCCGGCGTCCATc                                                                                                                   <  7:248127/130‑1 (MQ=255)                                                  gACCACC‑ATCGACAGCGACAGCATGATGCATTGAGTGACACCGGCGGCGATGCTTGGCATCGCGTGCGGCAGTTCGATACGGGTAAGCAGCTGACGACGCGAGCAGCCAAAGGCCTTGCCGGCGTCCATc                                                                                                                   >  8:248127/1‑130 (MQ=255)                                                      acc‑aTCGACAGCGACAGCATGATGCATTGAGTGACACCGGCGGCGATGCTTGGCATCGCGTGCGGCAGTTCGATACGGGTAAGCAGCTGACGACGCGAGCAGCCAAAGGCCTTGCCGGCGTCCATCAACTCTTGCGGCACGTCGCAGAt                                                                                            <  5:209742/149‑1 (MQ=255)                                                                             tgCATTGAGTGACACCGGCGGCGATGCTTGGCATCGCGTGCGGCAGTTCGATACGGGTAAGCAGCTGACGACGCGAGCAGCCAAAGGCCTTGCCGGCGTCCATCAACTCTTGCGGCACGTCGCAGATGCCCAGGTAGGTCAGGCGAAt                                                                       <  8:178280/148‑1 (MQ=255)                                                                              gCATTGAGTGACACCGGCGGCGATGCTTGGCATCGCGTGCGGCAGTTCGATACGGGTAAGCAGCTGACGACGCGAGCAGCCAAAGGCCTTGCCGGCGTCCATCAACTCTTGCGGCACGTCGCAGATGCCCAGGTAGGTCAGGCGAATgg                                                                     >  5:162181/1‑149 (MQ=255)                                                                                aTTGAGTGACACCGGCGGCGATGCTTGGCATCGCGTGCGGCAGTTCGATACGGGTAAGCAGCTGACGACGCGAGCAGCCAAAGGCCTTGCCGGCGTCCATCAACTCTTGCGGCACGTCGCAGATGCCCAGGTAGGTCAGGCGAATGGgc                                                                   >  2:75793/1‑149 (MQ=255)                                                                                    aGTGACACCGGCGGCGATGCTTGGCATCGCGTGCGGCAGTTCGATACGGGTAAGCAGCTGACGACGCGAGCAGCCAAAGGCCTTGCCGGCGTCCATCAACTCTTGCGGCACGTCGCAGATGCCCAGGTAGGTCAGGCGAATGGGCgcag                                                               <  2:45872/149‑1 (MQ=255)                                                                                            cggcggCGATGCTTGGCATCGCGTGCGGCAGTTCGATACGGGTAAGCAGCTGACGACGCGAGCAGCCAAAGGCCTTGCCGGCGTCCATCAACTCTTGCGGCACGTCGCAGATGCCCAGGTAGGTCAGGCGAATGGGCGCAGCAATGGCg                                                       <  6:162181/149‑1 (MQ=255)                                                                                             gcacgcgATGCCAAGCATCGCGTGCGGCAGTTCGATACGGGTAAGCAGCTGACGACGCGAGCAGCCAAAGGCCTTGCCGGCGTCCATCAACTCTTGCGGCACGTCGCAGATGCCCAGGTAGGTCAGGCGAATGGGCGCAGCAATGGCg                                                       >  3:46320/5‑148 (MQ=255)                                                                                              gcggcgATGCTTGGCATCGCGTGCGGCAGTTCGATACGGGTAAGCAGCTGACGACGCGAGCAGCCAAAGGCCTTGCCGGCGTCCATCAACTCTTGCGGCACGTCGCAGATGCCCAGGTAGGTCAGGCGAATGGGCGCAGCAATGGCGaa                                                     <  2:159821/149‑1 (MQ=255)                                                                                              cacgcgATGCCAAGCATCGCGTGCGGCAGTTCGATACGGGTAAGCAGCTGACGACGCGAGCAGCCAAAGGCCTTGCCGGCGTCCATCAACTCTTGCGGCACGTCGCAGATGCCCAGGTAGGTCAGGCGAATGGGCGCAGCAATGGCGaa                                                     >  7:28332/4‑149 (MQ=255)                                                                                               acgcgATGCCAAGCATCGCGTGCGGCAGTTCGATACGGGTAAGCAGCTGACGACGCGAGCAGCCAAAGGCCTTGCCGGCGTCCATCAACTCTTGCGGCACGTCGCAGATGCCCAGGTAGGTCAGGCGAATGGGCGCAGCAATGGCGaa                                                     >  3:93214/3‑148 (MQ=255)                                                                                                       cTTGGCATCGCGTGCGGCAGTTCGATACGGGTAAGCAGCTGACGACGCGAGCAGCCAAAGGCCTTGCCGGCGTCCATCAACTCTTGCGGCACGTCGCAGATGCCCAGGTAGGTCAGGCGAATGGGCGCAGCAATGGCGAACACCACgg                                             <  1:75793/148‑1 (MQ=255)                                                                                                        ttGGCATCGCGTGCGGCAGTTCGATACGGGTAAGCAGCTGACGACGCGAGCAGCCAAAGGCCTTGCCGGCGTCCATCAACTCTTGCGGCACGTCGCAGATGCCCAGGTAGGTCAGGCGAATGGGCGCAGCAATGGCGAACACCACGGTg                                           >  7:18884/1‑149 (MQ=255)                                                                                                           gCATCGCGTGCGGCAGTTCGATACGGGTAAGCAGCTGACGACGCGAGCAGCCAAAGGCCTTGCCGGCGTCCATCAACTCTTGCGGCACGTCGCAGTTGCCCAGGTAGGTCAGGCGAATGGGCGCAGCAATGGCGAACACCACGGTg                                           >  1:250836/1‑146 (MQ=255)                                                                                                              tCGCGTGCGGCAGTTCGATACGGGTAAGCAGCTGACGACGCGAGCAGCCAAAGGCCTTGCCGGCGTCCATCAACTCTTGCGGCACGTCGCAGATGCCCAGGTAGGTCAGGCGAATGGGCGCAGCAATGGCGAACACCACGGTGGAGATc                                     <  4:295914/149‑1 (MQ=255)                                                                                                                 cgTGCGGCAGTTCGATACGGGTAAGCAGCTGACGACGCGAGCAGCCAAAGGCCTTGCCGGCGTCCATCAACTCTTGCGGCACGTCGCAGATGCCCAGGTAGGTCAGGCGAATGGGCGCAGCAATGGCGAACACCACGGTGGAGATCAGc                                  >  8:29411/1‑149 (MQ=255)                                                                                                                   tGCGGCAGTTCGATACGGGTAAGCAGCTGACGACGCGAGCAGCCAAAGGCCTTGCCGGCGTCCATCAACTCTTGCGGCACGTCGCAGATGCCCAGGTAGGTCAGGCGAATGGGCGCAGCAATGGCGAACACCACGGTGGAGATCAGccc                                >  5:17655/1‑149 (MQ=255)                                                                                                                      ggCAGTTCGATACGGGTAAGCAGCTGACGACGCGAGCAGCCAAAGGCCTTGCCGGCGTCCATCAACTCTTGCGGCACGTCGCAGATGCCCAGGTAGGTCAGGCGAATGGGCGCAGCAATGGCGAACACCACGGTGGAGATCAGCCCCgg                             >  8:36631/1‑149 (MQ=255)                                                                                                                        cAGTTCGATACGGGTAAGCAGCTGACGACGCGAGCAGCCAAAGGCCTTGCCGGCGTCCATCAACTCTTGCGGCACGTCGCAGATGCCCAGGTAGGTCAGGCGAATGGGCGCAGCAATGGCGAACACCACGGTGGAGATCAGCCCCGGca                           <  7:36631/149‑1 (MQ=255)                                                                                                                           ttCGATACGGGTAAGCAGCTGACTACGCGAGCAGCCAAAGGCCTTGCCGGCGTCCATCAACTCTTGCGGCACGTCGCAGATGCCCAGGTAGGTCAGGCGAATGGGCGCAGCAATGGCGAacac                                                  <  8:171775/123‑1 (MQ=255)                                                                                                                           ttCGATACGGGTAAGCAGCTGACGACGCGAGCAGCCAAAGGCCTTGCCGGCGTCCATCAACTCTTGCGGCACGTCGCAGATGCCCAGGTAGGTCAGGCGAATGGGCGCAGCAATGGCGAACACCACGGTGGAGATc                                     <  6:91748/136‑1 (MQ=255)                                                                                                                           ttCGATACGGGTAAGCAGCTGACGACGCGAGCAGCCAAAGGCCTTGCCGGCGTCCATAAACTCTTGCGGCACGTCGCAGATGCCCAGGTAGGTCAGGCGAATGGGCGCAGCAATGGCGAACACCACGGTGGAGATc                                     >  5:91748/1‑136 (MQ=255)                                                                                                                              gATACGGGTAAGCAGCTGACGACGCGAGCAGCCAAAGGCCTTGCCGGCGTCCATCAACTCTTGCGGCACGTCGCAGATGCCCAGGTAGGTCAGGCGAATGGGCGCAGCAATGGCGAACACCACGGTGGAGATCAGCCCCGGCACCACGc                     >  4:252383/1‑149 (MQ=255)                                                                                                                              gATACGGGTAAGCAGCTGACGACGCGAGCAGCCAAAGGCCTTGCCGGCGTCCATCAACTCTTGCGGCACGTCGCAGATGCCCAGGTAGGTCAGGCGAATGGGCGCAGCAATGGCGAACACCACGGTGGAGATCAGCCCCGGCACCACGc                     >  8:111947/1‑149 (MQ=255)                                                                                                                               aTACGGGTAAGCAGCTGACGACGCGAGCAGCCAAAGGCCTTGCCGGCGTCCATCAACTCTTGCGGCACGTCGCAGATGCCCAGGTAGGTCAGGCGAATGGGCGCAGCAATGGCGAACACCACGGTg                                           >  4:77814/1‑126 (MQ=255)                                                                                                                               aTACGGGTAAGCAGCTGACGACGCGAGCAGCCAAAGGCCTTGCCGGCGTCCATCAACTCTTGCGGCACGTCGCAGATGCCCAGGTAGGTCAGGCGAATGGGCGCAGCAATGGCGAACACCACGGTg                                           <  3:77814/126‑1 (MQ=255)                                                                                                                                   gggTAAGCAGCTGACGACGCGAGCAGCCAAAGGCCTTGCCGGCGTCCATCAACTCTTGCGGCACGTCGCAGATGCCCAGGTAGGTCAGGCGAATGGGCGCAGCAATGGCGAACACCACGGTGGAGATCAGCCCCGGCACCACGCCCAgg                >  5:203841/1‑149 (MQ=255)                                                                                                                                       aaGCAGCTGACGACGCGAGCAGCCAAAGGCCTTGCCGGcgtcaggtgcttacccgtatcgaactgccgcacgcgatgccaagcatcgccgccggtgtcagtcaatgcatcttgctgtcgctgtcgttggtggtcattgccgagctggtt            <  5:309798‑M2/149‑112 (MQ=255)                                                                                                                                            gcTGACGACGCGAGCAGCCAAAGGCCTTGCCGGcgtcagctgcttacccgtatcgaactgccgcacgcgatgccaagcatcgccgccggtgtcactcaatgcatcatgctgtcgctgtcgatggtggtcattgccgccctggttggc         <  5:195317‑M2/147‑115 (MQ=255)                                                                                                                                            gcTGACGACGCGAGCAGCCAAAGGCCTTGCCGGcgtcagctgcttacccgtatcgaactgccgcacgcgatgccaagcatcgccgccggtgtcactcaatgcatcatgctgtcgctgtcgatggtggtcattgccgccctggttggc         >  6:195317‑M2/1‑33 (MQ=255)                                                                                                                                            gcTGACGACGCGAGCAGCCAAAGGCCTTGCCGGCGTCCATCAACTCTTGCGGCACGTCGCAGATGCCCAGGTAGGTCAGGCGAATGGGCGCAGCAATGGCGAACACCACGGTGGAGATCAGCCCCGGCACCACGCCCAGGCCGAAcagg       <  8:28332/149‑1 (MQ=255)                                                                                                                                             cTGACGACGCGAGCAGCCAAAGGCCTTGCCGGCGTCCATCAACTCTTGCGGCACGTCGCAGATGCCCAGGTAGGTCAGGCGAATGGGCGCAGCAATGGCGAACACCACGGTGGAGATCAGCCCCGGCACCACGCCCAGGCCGAAcaggg      >  3:11502/1‑149 (MQ=255)                                                                                                                                               gACGccggcaaggcctttggctgctcgcgtcgtcagctgcttacccgtatcgaactgccgcacgcgatgccaagcatcgccgccggtgtcactcaatgcatcatgctgtcgctgtcgatggtggtcattgccgccctggttggcgctga    >  7:126634‑M1/1‑4 (MQ=255)                                                                                                                                                acgacgCGAGCAGCCAAAGGCCTTGCCGGCGTCCATCAACTCTTGCGGCACGTCGCAGATGCCCAGGTAGGTCAGGCGAATGGGCGCAGCAATGGCGaa                                                     >  3:142151/1‑99 (MQ=255)                                                                                                                                                acgacgCGAGCAGCCAAAGGCCTTGCCGGCGTCCATCAACTCTTGCGGCACGTCGCAGATGCCCAGGTAGGTCAGGCGAATGGGCGCAGCAATGGCGaa                                                     <  4:142151/99‑1 (MQ=255)                                                                                                                                                 cGccggcaaggcctttggctgctcgcgtcgtcagctgcttacccgtatcgaactgccgcacgcgatgccaagcatcgccgccggtgtcactcaatgcatcatgctgtcgctgtcgatggtggtcattgccgccctggttggcgctgatg  <  3:295914‑M1/149‑148 (MQ=255)                                                                                                                                                  gccggcaaggcctttggctgctcgcgtcgtcagctgcttacccgtatcgaactgccgcacgcgatgccaagcatcgccgccggtgtcactcaatgcatcatgctgtcgctgtcgatggtggtcattgccgccctg               >  2:154993‑M1/1‑1 (MQ=255)                                                                                                                                                  gccggcaaggcctttggctgctcgcgtcgtcagctgcttacccgtatcgaactgccgcacgcgatgccaagcatcgccgccggtgtcactcaatgcatcatgctgtcgctgtcgatggtggtcattgccgccctg               <  1:154993‑M1/135‑135 (MQ=255)                                                                                                                                                  |                                                                                                                                                    CGTTGACCACAGGTTTGCCCAGGCCATCAGCGCCAACCAGGGCGGCAATGACCACC‑ATCGACAGCGACAGCATGATGCATTGAGTGACACCGGCGGCGATGCTTGGCATCGCGTGCGGCAGTTCGATACGGGTAAGCAGCTGACGACGCGAGCAGCCAAAGGCCTTGCCGGCGTCCATCAACTCTTGCGGCACGTCGCAGATGCCCAGGTAGGTCAGGCGAATGGGCGCAGCAATGGCGAACACCACGGTGGAGATCAGCCCCGGCACCACGCCCAGGCCGAACAGGGTCAG  >  NC_002947/354445‑354736

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.