New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	594783 =	58 (1.190)	5 (0.120)	4/232	NT	9.9%	intergenic (‑22/+105)	PP_0505/PP_0506	hypothetical protein/ABC transporter permease
	?	NC_002947	594844 =	40 (0.920)					intergenic (‑83/+44)	PP_0505/PP_0506	hypothetical protein/ABC transporter permease

AGTTGTGGCGGGATGACCGGGGCACCTTCAGGGATCAGTGCGGGCCAGTCCAGCTCCTTGGGTTCGGCGGCCCATAGAGGCATCGCTACCAGCAACAGCAAGGCCAGCAGCATGTGCATTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGT‑ACTGCACAAGCTCCAAAGCCTGCGGGGCTCC‑CTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCGGTGAGGTGTTTGATCATTACGCGCACTCAGAGGTGTATGGACAGGCCGTCAGCCAGCGATTGCCGGTAAG  >  NC_002947/594643‑594931                                                                                                                                             |                                                                                                                                                       aGTTGTGGCGGGATGACCGGGGCACCTTCAGGGATCAGTGCGGGCCAGTCCAGCTCCTTGGGTTCGGCGGCCCATAGAGGCATCGCTACCAGCAACAGCAAGGCCAGCAGCATGTGCATTGCCGGCCTCTTCGCGGGCATGCCCGcgaa                                                                                                                                                <  7:15862/149‑4 (MQ=255)     tcatcctgggggccgcgttgctgatgggcagcgtgccggcgtggcgggcttaccggcaatcgctggctgacggcctgtccatacacctctgagtgcgcgtaatgatcaaacacctcaccgcctgcttcgcgggcacGCCCGCTCCca                                                                                                                                              >  4:233384‑M1/137‑147 (MQ=255)     tcatcctgggggccgcgttgctgatgggcagcgtgccggcgtggcgggcttaccggcaatcgctggctgacggcctgtccatacacctctgagtgcgcgtaatgatcaaacacctcaccgcctgcttcgcgggcacGCCCGCTCCca                                                                                                                                              >  1:292323‑M1/137‑147 (MQ=255)      tgGCGGGATGACCGGGGCACCTTCAGGGATCAGTGCGGGCCAGTCCAGCTCCTTGGGTTCGGCGGCCCATAGAGGCATCGCTACCAGCAACAGCAAGGCCAGCAGCATGTGCATTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAg                                                                                                                                           <  8:21749/149‑1 (MQ=255)      tgGCGGGATGACCGGGGCACCTTCAGGGATCAGTGCGGGCCAGTCCAGCTCCTTGGGTTCGGCGGCCCATAGAGGCATCGCTACCAGCAACAGCAAGGCCAGCAGCATGTGCATTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAg                                                                                                                                           >  2:16040/1‑149 (MQ=255)      tgGCGGGATGACCGGGGCACCTTCAGGGATCAGTGCGGGCCAGTCCAGCTCCTTGGGTTCGGCGGCCCATAGAGGCATCGCTACCAGCAACAGCAAGGCCAGCAGCATGTGCATTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAg                                                                                                                                           <  1:45844/149‑1 (MQ=255)        tcctgggggccgcgttgctgatgggcagcgtgccggcgtggcgggcttaccggcaatcgctggctgacggcctgtccatacacctctgagtgcgcgtaatgatcaaacacctcaccgcctgcttcgcgggcacGCCCGCTCCCACAgg                                                                                                                                          <  8:204781‑M1/15‑1 (MQ=255)        gCGGGATGACCGGGGCACCTTCAGGGATCAGTGCGGGCCAGTCCAGCTCCTTGGGTTCGGCGGCCCATAGAGGCATCGCTACCAGCAACAGCAAGGCCAGCAGCATGTGCATTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAgg                                                                                                                                          >  4:261171/1‑148 (MQ=255)        gCGGGATGACCGGGGCACCTTCAGGGATCAGTGCGGGCCAGTCCAGCTCCTTGGGTTCGGCGGCCCATAGAGGCATCGCTACCAGCAACAGCAAGGCCAGCAGCATGTGCATTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAgg                                                                                                                                          >  2:91705/1‑148 (MQ=255)                  cGGGGCACCTTCAGGGATCAGTGCGGGCCAGTCCAGCTCCTTGGGTTCGGCGGCCCATAGAGGCATCGCTACCAGCAACAGCAAGGCCAGCAGCATGTGCATTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAg                                                                                                                                           >  5:17167/1‑137 (MQ=255)                  cGGGGCACCTTCAGGGATCAGTGCGGGCCAGTCCAGCTCCTTGGGTTCGGCGGCCCATAGAGGCATCGCTACCAGCAACAGCAAGGCCAGCAGCATGTGCATTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAg                                                                                                                                           <  6:17167/137‑1 (MQ=255)                        aCCTTCAGGGATCAGTGCGGGCCAGTCCAGCTCCTTGGGTTCGGCGGCCCATAGAGGCATCGCTACCAGCAACAGCAAGGCCAGCAGCATGTGCATTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGT‑ACTGCACAAGCTCCa                                                                                                                         >  5:168201/1‑148 (MQ=255)                               gggATCAGTGCGGGCCAGTCCAGCTCCTTGGGTTCGGCGGCCCATAGAGGCATCGCTACCAGCAACAGCAAGGCCAGCAGCATGTGCATTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCCCAGGT‑ACTGCACAAGCTCCAAAGCCTGc                                                                                                                 >  3:252577/1‑149 (MQ=255)                                ggATCAGTGCGGGCCAGTCCAGCTCCTTGGGTTCGGCGGCCCATAGAGGCATCGCTACCAGCAACATCAAGGCCAGCAGCATGTGCATTGCCGGCCTCTTCGCGGGCATGCCCGCTc                                                                                                                                                 <  7:108234/117‑1 (MQ=255)                                ggATCAGTGCGGGCCAGTCCAGCTCCTTGGGTTCGGCGGCCCATAGAGGCATCGCTACCAGCAACAGCAAGGCCAGCAGCATGTGCATTGACGGCCTCTTCTCGGGCATCCCCGCTc                                                                                                                                                 >  8:108234/1‑117 (MQ=255)                                 gATCAGTGCGGGCCAGTCCAGCTCCTTGGGTTCGGCGGCCCATAGAGGCATCGCTACCAGCAACAGCAAGGCCAGCAGCATGTGCATTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGT‑ACTGCACAAGCTCCAAAGCCTGCgg                                                                                                               <  1:275314/149‑1 (MQ=255)                                  aTCAGTGCGGGCCAGTCCAGCTCCTTGGGTTCGGCGGCCCATAGAGGCATCGCTACCAGCAACAGCAAGGCCAGCAGCATGTGCATTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGT‑ACTGCACAAGCTCCAAAGCCTGCggg                                                                                                              >  7:203142/1‑149 (MQ=255)                                      gTGCGGGCCAGTCCAGCTCCTTGGGTTCGGCGGCCCATAGAGGCATCGCTACCAGCAACAGCAAGGACAGCAGCATGTGCATTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGT‑ACTGCACAAGCTCCAAAGCCTGCCGGGCTc                                                                                                          >  6:120256/1‑149 (MQ=255)                                      gTGCGGGCCAGTCAAGCTCCTTGGGTTCCGCGGCCCATAGAGGCATCTCTACCAGCAACAGCAAGGCCAGCAGCATGTCCATTGCCGGCCTCTTCGCGGGCATGACCCCAACCACAGGT‑ACTTCACAAGCTACAAACCCTGAGGGGATc                                                                                                          >  5:55180/1‑149 (MQ=255)                                         cggcgtggcgggcttaccggcaatcgctggctgacggcctgtccatacacctctgagtgcgcgtaatgatcaaacacctcaccgcctgcttcgcgggcacGCCCGCTc                                                                                                                                                 <  2:212492‑M1/8‑1 (MQ=255)                                         cggcgtggcgggcttaccggcaatcgctggctgacggcctgtccatacacctctgagtgcgcgtaatgatcaaacacctcaccgcctgcttcgcgggcacGCCCGCTc                                                                                                                                                 >  5:140516‑M1/101‑108 (MQ=255)                                         cggcgtggcgggcttaccggcaatcgctggctgacggcctgtccatacacctctgagtgcgcgtaatgatcaaacacctcaccgcctgcttcgcgggcacGCCCGCTc                                                                                                                                                 >  1:212492‑M1/101‑108 (MQ=255)                                         cggcgtggcgggcttaccggcaatcgctggctgacggcctgtccatacacctctgagtgcgcgtaatgatcaaacacctcaccgcctgcttcgcgggcacGCCCGCTc                                                                                                                                                 <  6:140516‑M1/8‑1 (MQ=255)                                         ccggcgtggcgggcttaccggcaatcgctggctgacggcctgtccatacacctctgagtgcgcgtaatgatcaaacacctcaccgcctcttcgcgggcatGCCCGCTCCCACAGGT‑ACTGCACAAGCTCCAAAGCCTGCGGGGCTCC‑Ct                                                                                                      >  5:77288‑M1/101‑149 (MQ=255)                                            gCCAGTCCAGCTCCTTGGGTTCGGCGGCCCATAGAGGCATCGCTACCAGCAACAGCAAGGCCAGCAGCATGTGCATTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGT‑ACTGCACAAGCTCCAAAGCCTGCGGGGCTCC‑Ctgtg                                                                                                   >  5:247380/1‑149 (MQ=255)                                            gCCAGTCCAGCTCCTTGGGTTCGGCGGCCCATAGAGGCATCGCTACCAGCAACAGCAAGGCCAGCAGCATGTGCATTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGT‑ACTGCACAAGCTCCAAAGCCTGCGGGGCTCC‑Ctgtg                                                                                                   <  4:58562/149‑1 (MQ=255)                                             ccAGTCCAGCTCCTTGGGTTCGGCGGCCCATAGAGGCATCGCTACCAGCAACAGCAAGGCCAGCAGCATGTGCATTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGT‑ACTGCACAAGCTCCAAAGCCTGCGGGGCTCC‑CTGTgg                                                                                                  <  1:126223/149‑1 (MQ=255)                                             ccAGTCCAGCTCCTTGGGTTCGGCGGCCCATAGAGGCATCGCTACCAGCAACAGCAAGGCCAGCAGCATGTGCATTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGT‑ACTGCACAAGCTCCAAAGCCTGCGGGGCTCC‑CTGTgg                                                                                                  <  3:24341/149‑1 (MQ=255)                                               aGTCCAGCTCCTTGGGTTCGGCGGCCCATAGAGGCATCGCTACCAGCAACAGCAACGCCAGCAGCATGTGCATTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGT‑ACTGCACAAGCTCCAAAGCCTGCGGGGCTCC‑CTGTGGGa                                                                                                <  8:117773/149‑1 (MQ=255)                                                 tCCAGCTCCTTGGGTTCGGCGGCCCATAGAGGCATCGCTACCAGAAACAGCAAGGCCAGCAGCATGTGCATTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGT‑ACTGCACAAGCTCCAAAGCCTGCGGGGCTCC‑CTGTCGGAGc                                                                                              >  3:136526/1‑149 (MQ=255)                                                  gggcttaccggcaatcgctggctgacggcctgtccatacacctctgagtgcgcgtaatgatcaaacacctcaccgcctgcttcgcgggcacGCCCGCTCCCACAGGT‑ACTGCACAAGCTCCAAAGCCTGCGGGGCTCC‑CTGTGGGAGCg                                                                                             >  2:220909‑M1/92‑149 (MQ=255)                                                  ggcttaccggcaatcgctggctgacggcctgtccatacacctctgagtccgcgtaatgatcaaacacctcaccgcctgcttcctcgggcatGCCCGCTCCCACAGGT‑ACTGCACAAGCTCCAAAGCCTGCGGGGCTCC‑CTGTGGGAGCg                                                                                             >  1:245741‑M1/92‑149 (MQ=255)                                                     gCTCCTTGGGTTCGGCGGCCCATAGAGGCATCGCTACCAGCAACAGCAAGGCCAGCAGCATGTGCATTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGT‑ACTg                                                                                                                                    >  7:258370/1‑108 (MQ=255)                                                     gCTCCTTGGGTTCGGCGGCCCATAGAGGCATCGCTACCAGCAACAGCAAGGCCAGCAGCATGTGCATTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGT‑ACTg                                                                                                                                    <  8:258370/108‑1 (MQ=255)                                                         cTTGGGTTCGGCGGCCCATAGAGGCATCGCTAACAGCAACAGCAAGGCCAGCAGCATGTGCATTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGT‑ACTGCACAAGCTCCAAAGCCTGCGGGGCTCC‑CTGTGGGAGCGGGCGt                                                                                        <  8:203142/147‑1 (MQ=255)                                                         cTTGGGTCCGGCGGCCCATAGAGGCAGCGCTACCTGCAACTGCAAGGCCAGCAGCATGTGCATTGCCGGCCGCTTCGCGGGCATGCCCGCTCCCACAGGT‑ACTGCACAAGCTCCAAAGCCTGCGGGGCTCC‑CACAGGGAGccccgca                                                                                        <  1:138685/147‑7 (MQ=38)                                                          cggcaatcgctggctgacggcctgtccatacacctctgagtgcgcgtaatgatcaaacacctcaccgcctgcttcgcgggcacGCCCGCTCCCACAGGT‑ACTGCACAAGCTCCAAAGCCTGCGGGGCTCC‑Ctgt                                                                                                    <  6:25697‑M1/51‑1 (MQ=255)                                                          cggcaatcgctggctgacggcctgtccatacacctctgagtgcgcgtaatgatcaaacacctcaccgcctgcttcgcgggcacGCCCGCTCCCACAGGT‑ACTGCACAAGCTCCAAAGCCTGCGGGGCTCC‑Ctgt                                                                                                    >  5:25697‑M1/84‑134 (MQ=255)                                                              gTTCGGCGGCCCATAGAGGCATCGCTACCAGCAACAGCAAGGCCAGCAGCATGTGCATTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGT‑ACTGCACAAGCTCCAAAGCCTGCGGGGCTCC‑CTGTGGGAGCGGGc                                                                                          >  4:88614/1‑140 (MQ=255)                                                              gTTCGGCGGCCCATAGAGGCATCGCTACCAGCAACAGCAAGGCCAGCAGCATGTGCATTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGT‑ACTGCACAAGCTCCAAAGCCTGCGGGGCTCC‑CTGTGGGAGCGGGc                                                                                          <  3:88614/140‑1 (MQ=255)                                                              gTTCGGCGGCCCATAGAGGCATCGCTACCAGCAACAGCAAGGCCAGCAGCATGTGCATTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGT‑ACTGCACAAGCTCCAAAGCCTGCGGGGCTCC‑CTGTGGGAGCGGGCGTGCCcgc                                                                                  >  7:92030/1‑148 (MQ=255)                                                                 cggcggCCCATAGAGGCATCGCTACCAGCAACAGCAAGGCCAGCAGCATGTGCATTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGT‑ACTGCACAAGCTCCAAAGCCTGCGGGGCTCC‑CTGTGGGAGCGGGCGTGCCCGCGaa                                                                               <  3:261171/148‑1 (MQ=255)                                                                   gcggcCCATAGAGGCATCGCTACCAGCAACAGCAAGGCCAGCAGCATGTGCATTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGT‑ACTGCACAAGCTCCAAAGCCTGCg                                                                                                                <  7:172196/114‑1 (MQ=255)                                                                   gcggcCCATAGAGGCATCGCTACCAGCAACAGCAAGGCCAGCAGCATGTGCATTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGT‑ACTGCACAAGCTCCAAAGCCTGCg                                                                                                                >  8:172196/1‑114 (MQ=255)                                                                        ccATAGAGGCATCGCTACCAGCAACAGCAAGGCCAGCAGCATGTGCATTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGT‑ACTGCACAAGCTCCAAAGCCTGCGGGGCTCC‑CTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCgg                                                                       >  7:107044/1‑149 (MQ=255)                                                                        ccATAGAGGCATCGCTACCAGCAACAGCAAGGCCAGCAGCATGTGCATTGCCGGCCTCTTCGCGGGCAAGCCCGCTCCCACAGGG‑ACTGCACAAGCTCCAAAGCCTGCGGGGCTCC‑CGGTGGGAGCGGGCGTGCCCGCGAAGCcggcgg                                                                       >  2:302783/1‑149 (MQ=255)                                                                                      atACCACCAACACAATGCCCACCACCATTTCAATTCCCGCCCTCTTCGCGGGCA‑GCCCCTCCCCACCCGTAACTCCAAACGCCCCAACGCCTGCGGGGCCCC‑CTGGGGTAGCGGGCGTGCCCGCGAAGCAGGCGGTGAGGTGTTTGATc                                                         <  6:168201/148‑1 (MQ=255)                                                                                        aCCAGCAACAGCAAGGCCAGCAGCATGTGCATTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGT‑ACTGCACAAGCTCCAAAGCCTGCGGGGCTCC‑CTGTgg                                                                                                  >  6:145119/1‑106 (MQ=255)                                                                                        aCCAGCAACAGCAAGGCCAGCAGCATGTGCATTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGT‑ACTGCACAAGCTCCAAAGCCTGCGGGGCTCC‑CTGTgg                                                                                                  <  5:145119/106‑1 (MQ=255)                                                                                          cagcaacagcaaGGCCAGCAGCATGTGCATTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGT‑ACTGCACAAGCTCCAAAGCCTGCGGGGCTCC‑CTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCGGTGAGGTGTTTGATCATTa                                                     >  6:64160/1‑149 (MQ=255)                                                                                            gcaacagcaaGGCCAGCAGCATGTGCATTGCCGGCCTCTTCGCGGGCATGCCCGCAACCACAGGT‑ACTGCACAACCTCCAAAGCCAGCGGGGCTCC‑CTGTGGGAGCGGGCGTTCCCGCGAACCAGGCGGTGAGGTGTTTGATCATTAcg                                                   >  5:204585/1‑149 (MQ=39)                                                                                                cagcaaGGCCAGCAGCATGTGCATTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGT‑ACTGCACAAGCTCCAAAGCCTGCGGGGCTCC‑CTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCGGTGAGGTGTTTGATCATTACGCGCa                                               >  5:225951/1‑149 (MQ=255)                                                                                                   caaGGCCAGCAGCATGTGCATTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGT‑ACTGCACAAGCTCCAAAGCCTGCGGGGCTCC‑CTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCGGTGAGGTGTTTGATCATTACGCGCACt                                             >  6:153784/1‑148 (MQ=255)                                                                                                     aGGCCAGCAGCATGTGCATTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGT‑ACTGCACAAGCTCCAAAGCCTGCGGGGCTCC‑CTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCGGTGAGGTGTTTGATCATTACGCGCACt                                             >  1:261917/1‑146 (MQ=255)                                                                                                        ccccccccaTGTGCATTGCCGGCCTCTTCGGGGGCATGCCCGGTCCCAAATGT‑ACTTCAAAAGCCCCAAAGCCTGCGGGGCTCCTCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCGGTGAGGTGTTTGATCATTACGCGCACTCagag                                        <  1:91705/142‑1 (MQ=255)                                                                                                         cagcagCATGTGCTTTGCCGGCGTCTTCGCGGGAATGCCCGCTCCAACTGGT‑ACTCCACAAGCTCCAACGCCTGGGGGGCTCC‑GTGTGGTAGGGGGCGTGCCGGCGAAGCAGGCGGTGAGGTGTTTGATCATTACGCGCACTCAGAGgt                                      <  4:112810/149‑1 (MQ=255)                                                                                                          agcagcATGTGCATTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGT‑ACTGCACAAGCTCCAAAGCCTGCGGGGCTCC‑CTGTGGGAGCGGGCGTGCCCGCGCAGCAGGCGGTGAGGTGTTTGATCATTACGCGCACTCaga                                         <  1:128061/145‑1 (MQ=255)                                                                                                          agcagcATGTGCATTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGT‑ACTGCACAAGCTCCAAAGCCTGCGGGGCTCC‑CTGTGGGAGCGGGCGTGCCCGCGCAGCAGGCGGTGAGGTGTTTGATCATTACGCGCACTCaga                                         >  2:128061/1‑145 (MQ=255)                                                                                                          agcagcATGTGCATTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGT‑ACTGCACAAGCTCCAAAGCCTGCGGGGCTCC‑CTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCGGTGAGGTGtt                                                              <  7:150628/124‑1 (MQ=255)                                                                                                          agcagcATGTGCATTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGT‑ACTGCACAAGCTCCAAAGCCTGCGGGGCTCC‑CTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCGGTGAGGTGtt                                                              >  8:150628/1‑124 (MQ=255)                                                                                                             agcaTGTGCATTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGT‑ACTGCACAAGCTCCAAAGCCTGCGGGGCTCC‑CTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCGGTGAGGTGTTTGATCATTACGCGCACTCAGAGGTGTAt                                  <  6:225951/149‑1 (MQ=255)                                                                                                              gcaTGTGCATTGCCGGCTTCTTCGCGGGCATGCCCGCTCCCACAGGT‑ACTGCACCAGCTCCAAAGCCTGCGGGGATCC‑CTGTGGGTGCGGGCGTGCCCGCGAAGCAGGCGGTGAGGTGTTTGATCATTACGCGCACTCAGAGGTGTATg                                 <  5:120256/149‑1 (MQ=255)                                                                                                                aTGTGCATTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGT‑ACTGCACAAGCTCCAAAGCCTGCGGGGCTCC‑CTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCGGTGAGGTGTTTGATCATTACGCGCACTCAGAGGTGTATGGa                               >  4:133134/1‑149 (MQ=255)                                                                                                                   tttaTTGCGGGCATTTTCGCTGGCATGCCCGCTCCAACAGGT‑ACTGAACAAGCTCCAAAGCCTGGTGGGCTCC‑CTGTGGGAGCGGGTGTGCCCGCGAAGCAGGCGGTGAGGTGTTTGATCATTACGCGCACTCAGAGGTGTATGGACa                             <  6:55180/145‑1 (MQ=255)                                                                                                                           cGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGT‑ACTGCCCAAGCTCCAAAGCCTGCGGGGCTCC‑CTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCGGTGAGGTGTTTGATCATTACGCGCACTCAGAGGTGTATGGACAgg                           <  6:134236/142‑1 (MQ=255)                                                                                                                           cGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGT‑ACTGCACAAGCTCCAAAGCCTGCGGGGCTCC‑CTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCGGTGAGGTGTTTGATCATTACGCGCACTCAGAGGTGTATGGACAgg                           >  5:134236/1‑142 (MQ=255)                                                                                                                            ggCCTCTTCGCGGGCATGCCCGCTCCCACAGGT‑ACTGCACAAGCTCCAAAGCCTGCGGGGCTCC‑CTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCGGTGAGGTGTTTGATCATTACGCGCACTCAGAGGTGTATGGACAGGCCGTcagc                   >  5:4565/1‑149 (MQ=255)                                                                                                                               ctctTCGCGGGCATGCCCGCTCCCACAGGT‑ACTGCACAAGCTCCAAAGCCTGCGGGGCTCC‑CTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCGGTGAGGTGTTTGATCATTACGCGCACTCAGAGGTGTATGGACAGGCCGTcagccag                >  6:102535/1‑149 (MQ=255)                                                                                                                                     gcgGGCATCCCCGCCCCCACAGGA‑ACTCCACACCCGCCAACCCCGGCGGGGCCCC‑CTGGGGTAGGGGGGGTCCCCGCGAAGCAGGCGGTGAGGTGTTTGATCATTACGCGCACTCAGAGGTGTATGGACAGGCCGTCAGCCAGCGAtt           <  4:136526/148‑1 (MQ=255)                                                                                                                                      cgGGCATGCCCGCTCCCACAGGT‑ACTGCACAAGCTCCAAAGCCTGCGGGGCTCC‑CTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCGGTGAGGTGTTTGATCATTACGCGCACTCAGAGGTGTATGGACAGGCCGTCAGCCAGCGATTGc         >  8:287126/1‑149 (MQ=255)                                                                                                                                        ggCATGCCCGCTCCCACAGGT‑ACTGCACAAGCTCCAAAGCCTGCGGGGCTCC‑CTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCGGTGAGGTGTTTGATCATTACGCGCACTCAGAGGTGTATGGACAGGCCGTCAGCCAGCGATTGCCg       >  4:112760/1‑149 (MQ=255)                                                                                                                                             GCCCGCTCCCACAGGT‑ACTGCACAAGCTCCAAAGCCTGCGGGGCTCC‑CTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCGGTGAGGTGTTTGATCATTACGCGCACTCAGAGGTGTATGGACAGGCCGTCAGCCAGCGATTGCCGGTAAg  <  7:245025‑M1/149‑1 (MQ=255)                                                                                                                                             |                                                                                                                                                       AGTTGTGGCGGGATGACCGGGGCACCTTCAGGGATCAGTGCGGGCCAGTCCAGCTCCTTGGGTTCGGCGGCCCATAGAGGCATCGCTACCAGCAACAGCAAGGCCAGCAGCATGTGCATTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGT‑ACTGCACAAGCTCCAAAGCCTGCGGGGCTCC‑CTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCGGTGAGGTGTTTGATCATTACGCGCACTCAGAGGTGTATGGACAGGCCGTCAGCCAGCGATTGCCGGTAAG  >  NC_002947/594643‑594931

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.