New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1578505 =	56 (1.140)	3 (0.060)	3/254	NT	5.4%	coding (2892/3153 nt)	ttgB	efflux pump membrane protein TtgB
	?	NC_002947	1578560 =	50 (1.050)					coding (2837/3153 nt)	ttgB	efflux pump membrane protein TtgB

GTCGCACTGATCATGCCGCCGATCACGCCAGTACCGATGGCGTGCTGGCTGCCGGCGCCGGCGCCGCTGGCGATGGTCAACGGTACCACGCCCAGGATGAACGCCAGCGAGGTCATGATGATCGGGCGCAGACGCATGCGGCACGCCTCGATCGCTGCGTCG‑TACAGGCTGCGGCCTTGTTCGTGCAGCTCCTTGGCGAATTCCACGATCAGAATGGCGTTTTTCGCCGCAAGACCGATGGTGGTCAACAGGCCAACCAGGAAGTACACGTCGTTGGACAGGCC  >  NC_002947/1578362‑1578645                                                                                                                                                |                                                                                                                                              gtggtgctggtagtaccgctgggcatcatcggtgcgctgatcgccaccagcctgcgcggcctgtccaacgacgtgtacttcctggttggcctgttgaccaccatcggtcttgcggcgaaaaacgccattctgatcgtggaattCGcc                                                                                                                                            <  8:188153‑M1/4‑1 (MQ=255)    gtgctggtagtaccgctgggtatcatcggtgcgctgatcgccaccagcctgcgcggcctgtccaacgacgtgtacttcctggttggcatgttgaccaccatcggtcttgcggcgaaaaacgccattctgatcgtggaattCGCCTCGAt                                                                                                                                       <  4:104002‑M1/9‑1 (MQ=255)          aTCATGCCGCCGATCACGCCAGTACCGATGGCGTGCTGGCTGCCGGCGCCGGCGCCGCTGGCGATGGTCAACGGTACCACGCCCAGGATGAACGCCAGCGAGGTCATGATGATCGGGCGCAGACGCATGCGGCACGCCTCGATCGCt                                                                                                                                   <  5:138799/147‑1 (MQ=255)               gccgccGATCACGCCAGTACCGATGGCGTGCTGGCTGCCGGCGCCGGCGCCGCTGGCGATGGTCAACGGTACCAAGCCCAGGATGAACGCCAGCGAGGTCATGATGATCGGGCGCAGACGCATGCGGCACGCCTCGATCGCTGcgtcg                                                                                                                             >  2:119770/1‑148 (MQ=255)                ccgccgATCACGCCAGTACCGATGGCGTGCTGGCTGCCGGCGCAGGCGCCGCTGGAGATGGTCAACGGTACCACGCCCAGGATCAACGCCAGCCAGGTCATGATGATCGGGCCAAGACGCATCCGGCACGCCTCGATCGCTGcgtcg‑t                                                                                                                           >  8:18887/1‑148 (MQ=255)                ccgacgATCACGCCAGTACCGATGGCGTGCTGGATGCCGGCGCCGGCGCCGCTGGCGATGGTCAATGGTACCACGCCCAGGATGAACGCCAGCGAGGTCATGATGATCGGGCGCAGACGCATGCGGCACGCCTCGATCGCTGcgtcg‑t                                                                                                                           <  8:144304/148‑1 (MQ=255)                 cgccgATCACGCCAGTACCGATGGCGTGCTGGCTGCCGGCGCCGGCGCCGCTGGCGATGGTCAACGGTACCACGCCCAGGATGAACGCCAGCGAGGTCATGATGATCGGGCGCAGACGCATGCGGCACGCCTCGATCGCTGCGTCG‑Ta                                                                                                                          >  1:124008/1‑148 (MQ=255)                 cgccgATCACGCCAGTACCGATGGCGTGCTGGCTGCCGGCGCCGGCGCCGCTGGCGATGGTCAACGGTACCACGCCCAGGATGAACGCCAGCGAGGTCATGATGATCGGGCGCAGACGCATGCGGCACGCCTCGATCGCTGCGTCG‑TAc                                                                                                                         <  2:124008/149‑1 (MQ=255)                 cgccgATCACGCCAGTACCGATGGCGTGCTGGCTGCCGGCGCCGGCGCCGCTGGCGATGGTCAACGGTACCACGCCCAGGATGAACGCCAGCGAGGTCATGATGATCGGGCGCAGACGCATGCGGCACGCCTCGATCGCTGCGTCG‑TAc                                                                                                                         <  5:2124/149‑1 (MQ=255)                    tgggtatcatcggtgcgctgatcgccaccagcctgcgcggcctgtccaacgacgtgtacttcctggttggcctgttgaccaccatcggtcttgcggcgaaaaacgccattctgatcgtggaattc                                                                                                                                               <  6:271101‑M1/1‑1 (MQ=255)                    tgggtatcatcggtgcgctgatcgccaccagcctgcgcggcctgtccaacgacgtgtacttcctggttggcctgttgaccaccatcggtcttgcggcgaaaaacgccattctgatcgtggaattc                                                                                                                                               >  5:271101‑M1/125‑125 (MQ=255)                         aCGCCAGTACCGATGGCGTGCTGGCTGCCGGCGCCGGCGCCGCTGGCGATGGTCAACGGTACCACGCCCAGGATGAACGCCAGCGAGGTCATGATGATCGGGCGCAGACGCATGCGGCACGCCTCGATCGCTGCGTCG‑TACAGGCTGCg                                                                                                                 >  1:285567/1‑149 (MQ=255)                         aCGCCAGTACCGATGGCGTGCTGGCTGCCGGCGCCGGCGCCGCTGGCGATGGTCAACGGTACCACGCCCAGGATGAACGCCAGCGAGGTCATGATGATCGGGCGCAGACGCATGCGGCACGCCTCGATCGCTGCGTCG‑TACAGGCTGCg                                                                                                                 >  3:279917/1‑149 (MQ=255)                                     aTGGCGTGCTGGCTGCCGGCGCCGGCGCCGCTGGCGATGGTCAACGGTACCACGCCCAGGATGAACGCCAGCGAGGTCATGATGATCTGGCGCAGACGCATGCGGCACGCCTCGATCGCTGAGTCG‑TACAGGCTGCGGCCTGGATCGTg                                                                                                     >  2:147304/1‑149 (MQ=255)                                        gCGTGCTGGCTGCCGGCGCCGTCGCCGCTGGCGATGGTCAACGGTACCACGCCCAGGATGAACGCCAGCGAGGTCATGATGATCGGGCGCAGACGCATGCGGCACGCCTCGATCGCTGCGTCG‑TACAGGCTGCGGCCTTGTTCGTGCa                                                                                                   <  5:14663/148‑1 (MQ=255)                                        gCGTGATGGCTGCCGGCGCCGGCGCCGCTGGCGATGGTCAACGGTACCACGCCCAGGATGAACGCCAGCGAGGTCATGATGATCGGGCGCAGACGCATGCGGCACGCCTCGATCGCTGCGTCG‑TACAGGCTGCGGCCTTGTTc                                                                                                        >  4:59517/1‑143 (MQ=255)                                        gCGTGATGGCTGCCGGCGCCGGCGCCGCTGGCGATGGTCAACGGTACCACGCCCAGGATGAACGCCAGCGAGGTCATGATGATCGGGCGCAGACGCATGCGGCACGCCTCGATCGCTGCGTCG‑TACAGGCTGCGGCCTTGTTc                                                                                                        <  3:59517/143‑1 (MQ=255)                                             caccagcctgcgcggcctgtccaacgacgtgtacttcctggttggcctgttgaccaccatcggtcttgcggcgaaaaacgccattctgatcgtggaattCGCCTCGATCGCTGCGTCG‑TACAGGCTGCGGCCTTGTTCGTGCAGCTCCt                                                                                             <  3:298748‑M1/50‑1 (MQ=255)                                               ggctgCCGGCGCCGGCGCCGCTGGCGATGGTCAACGGTACCACGCCCAGGATGAACGCCAGCGAGGTCATGATGATCGGGCGCAGACGCATGCGGCACGCCTCGATCGCTGCGTCG‑TACAGGCTGCGGCCTTGTTCGTGCAGCTCCTTg                                                                                           >  1:69506/1‑149 (MQ=255)                                                  tgCCGGCGCCGGCGCCGCTGGCGATGGTCAACGGTACCACGCCCAGGATGAACGCCAGCGAGGTCATGATGATCGGGCGCAGACGCATGCGGCACGCCTCGATCGCTGCGTCG‑TACAGGCTGCGGCCTTGTTCGTGCAGCTCCTTGGc                                                                                         >  3:201984/1‑148 (MQ=255)                                                    ctgcgcggcctgtccaacgacgtgtacttcctggttggcctgttgaccaccatcggtcttgcggcgaaaaacgccattctgatcgtggaattCGCCTCGATCGCTGCGTCG‑TACAGGCTGCGGCCTTGTTCGTGCAGCTCCTTGGCGaa                                                                                      >  4:298748‑M1/93‑149 (MQ=255)                                                     cggcgccggcgcCGCTGGCGATGGTCAACGGTACCACGCCCAGGATGAACGCCAGCGAGGTCATGATGATCGGGCGCAGACGCATGCGGCACGCCTCGATCGCTGCGTCG‑TACAGGCTGCGGCCTTGTTCGTGCAGCTCCTTGGCGAAt                                                                                     <  2:285567/149‑1 (MQ=255)                                                         gccggcgccgCTGGCGATGGTCAACGGTACCACGCCCAGGATGAACGCCAGCGAGGTCATGATGATCGGGCGCAGACGCATGCGGCACGCCTCGATCGCTGCGTCG‑TACAGGCTGCGGCCTTGTTCGTGCAGCTCCTTGGCGAATTCCa                                                                                 <  7:18887/149‑1 (MQ=255)                                                         gccggcgccgCTGGCGATGGTCAACGGTACCACGCCCAGGATGAACGCCAGCGAGGTCATGATGATCGGGCGCAGACGCATGCGGCACGCCTCGATCGCTGCGTCG‑TACAGGCTGCGGCCTTGTTCGTGCAGCTCCTTGGCGAATTCCa                                                                                 <  4:78438/149‑1 (MQ=255)                                                          ggcctgtccaacgacgtgtacttcctggttggcctgttgaccaccatcggtcttgcggcgaaaaacgccattctgatcgtggaattCg                                                                                                                                              >  6:125760‑M1/87‑88 (MQ=255)                                                          ggcctgtccaacgacgtgtacttcctggttggcctgttgaccaccatcggtcttgcggcgaaaaacgccattctgatcgtggaattCg                                                                                                                                              <  5:125760‑M1/2‑1 (MQ=255)                                                           gcctgtccaacgacgtgtacttcctggttggcatgttgaccaccatcggtcttgcggcgaaaaacgccattctgatcgtggaattCGCCTCGATCGCTGCGTCG‑TACAGGCTGCGGCCTTGTTCGTGCAGCTCCTTGGCGAATTCCACg                                                                               >  3:104002‑M1/86‑149 (MQ=255)                                                           cggcgccgCTGGCGATGGTCAACGGTACCACGCCCAGGATGAACGCCAGCGAGGTCATGATGATCGGGCGCAGACGCATGCGGCACGCCTCGATCGCTGCGTCG‑TACAGGCTGCGGCCTTGTTCGTGCAGCTCCTTGGCGAATTCCACg                                                                               <  8:147151/149‑1 (MQ=255)                                                              cgccgcTGGCGATGGTCAACGGTACCACGCCCAGGATGAACGCCAGCGAGGTCATGATGATCGGGCGCAGACGCATGCGGCACGCCTCGATCGCTGCGTCGCTACAGGCTGCGGCCTTGTTCGTGCAGCTCCTTgg                                                                                          <  1:41075/136‑1 (MQ=255)                                                              cgccgcTGGCGATGGTCAACGGTACCACGCCCAGGATGAACGCCAGCGAGGTCATGATGATCGGGCGCAGACGCATGCGGCACGCCTCGATCGCTGCGTCG‑TACAGGCTGCGGCCTTGTTCGTGCAGCTCCTTgg                                                                                          >  2:41075/1‑135 (MQ=255)                                                                    tGGCGATGGTCAACGGTACCACGCCCAGGATGAACGCCAGCGAGGTCATGATGATCGGGCGCAGACGCATGCGGCACGCCTCGATCACTGCGTCG‑TACAGGCTGCGGCCTTGTTCGTGCAGCTCCTTGGCGAATTCCACGATCAGAATg                                                                      <  2:97365/149‑1 (MQ=255)                                                                      gCGATGGTCAACGGTACCACGCCCAGGATGAACGCCAGCGAGGTCATGATGATCGGGCGCAGACGCATGCGGCACGCCTCGATCGCTGCGTCG‑TACAGGCTGCGGCCTTGTTCGTGCAGCTCCTTGGCGAATTCCACGATCAGAATGGc                                                                    <  4:279917/149‑1 (MQ=255)                                                                          tGGTCAACGGTACCACGCCCAGGATGAACGCCTGCGAGGTCATGATGATCGGGCGCAGACGCATGCGGCACGCCTCGATCGCTGCGTCG‑TACAGGCTGCGGCCTTGTTCGTGCAGCTCCTTGGCGAATTCCACGATCAGAATGGCGttt                                                                <  8:114453/149‑1 (MQ=255)                                                                             tCAACGGTACCACGCCCAGGATGAACGCCAGCGAGGTCATGATGAACGGGCGCAGACGCATGCGGCACGCCTCGATCGCTGCGTCG‑TACAGGCTGCGGCCTTGTTCGTGCAGCTCCTTGGCGAATTCCACGATCAGAATGGCGTTTTTc                                                             >  1:219487/1‑149 (MQ=255)                                                                              cAACGGTACCACGCCCAGGATGAACGCCAGCGAGGTCATGATGATCGGGCGCAGACGCATGCGGCACGCCTCGATCGCTGCGTCG‑TACAGGCTGCGGCCTTGTTCGTGCAGCTCCTTGGCGAATTCCACGATCAGAATGGCGTTTTTcg                                                            >  2:105977/1‑149 (MQ=255)                                                                               aaCGGTACCACGCCCAGGATGAACGCCAGCGAGGTCATGATGATCGGGCGCAGACGCATGCGGCACGCCTCGATCGCTGCGTCG‑TACAGGCTGCGGCCTTGTTCGTGc                                                                                                    <  6:197111/108‑1 (MQ=255)                                                                               aaCGGTACCACGCCCAGGATGAACGCCAGCGAGGTCATGATGATCGGGCGCAGACGCATGCGGCACGCCTCGATCGCTGCGTCG‑TACAGGCTGCGGCCTTGTTCGTGc                                                                                                    >  5:197111/1‑108 (MQ=255)                                                                                    tACCACGCCCAGGATGAACGCCAGCGAGGTCATGATGATCGGGCGCAGACGCATGCGGCACGCCTCGATCGCTGCGTCG‑TACAGGCTGCGGCCTTGTTCGTGCAGCTCCTTGGCGAATTCCACGATCAGAATGGCGTTTTTCGCCGCaa                                                      <  7:90235/149‑1 (MQ=255)                                                                                     aCCACGCCCAGGATGAACGCCAGCGAGGTCATGATGATCGGGCGCAGACGCATGCGGCACGCCTCGATCGCTGCGTCG‑TACAGGCTGCGGCCTTGTTCGTGCAGCTCCTTGGCGAATTCCACGATCAGAATGGCGTTTTTcgccgc                                                        >  6:179291/1‑146 (MQ=255)                                                                                      ccACGCCCAGGATGAACGCCAGCGAGGTCATGATGATCGGGCGCAGACGCATGCGGCACGCCTCGATCGCTGCGTCG‑TACAGGCTGCGGCCTTGTTCGTGCAGCTCCTTGGCGAATTCCACGATCAGAATGGCGTTTTTCGCCGCAAGa                                                    >  3:86948/1‑149 (MQ=255)                                                                                         cGCCCAGGATGAACGCCAGCGAGGTCATGATGATCGGGCGCAGACGCATGCGGCACGCCTCGATCGCTGCGTCG‑TACAGGCTGCGGCCTTGTTCGTGCAGCTCCTTGGCGAATTCCACGATCAGAATGGCGTTTTTCGCCGCAAGAcc                                                  >  4:54035/1‑148 (MQ=255)                                                                                           cccAGGATGAACGCCAGCGAGGTCATGATGATCGGGCGCAGACGCATGCGGCACGCCTCGATCGCTGCGTCG‑TACAGGCTGCGGCCTTGTTCGTGCAGCTCCTTGGCGAATTCCACGATCAGAATGGCGTTTTTCGCCGCAAGACCGAt                                               <  1:239900/149‑1 (MQ=255)                                                                                            ccAGGATGAACGCCAGCGAGGTCATGATGATCGGGCGCAGACGCATGCGGCACGCCTCGATCGCTGCGTCG‑TACAGGCTGCGGCCTTGTTCGTGCAGCTCCTTGGCGAATTCCACGATCAGAATGGCGTTTTTCGCCGCAAGACCGAtg                                              >  5:249105/1‑149 (MQ=255)                                                                                                   gAACGCCAGCGAGGTCATGATGATCGGGCGCAGACGCATGCGGCACGCCTCGATCGCTGCGTCG‑TACAGGCTGCGGCCTTGTTCGTGCAGCTCCTTGGCGAATTCCACGATCAGAATGGCGTTTTTCGCCGCAAGACCGATGGTGGTc                                        <  2:219487/148‑1 (MQ=255)                                                                                                    aaggCCAGCGAGGTCATGATGATCGGGCGCAGACGCATGCGGCACGCCTCGATCGCTGCGTCG‑TACAGGCTGCGGCCTTGTTCGTGCAGCTCCTTGGCGAATTCCACGATCAGAATGGCGTTTTTCGCCGCAAGACCGATGGTGGTCaa                                      <  8:73938/146‑1 (MQ=255)                                                                                                     aCGCCAGCGAGGTCATGATGATCGGGCGCAGACGCATGCGGCACGCCTCGATCGCTGCGTCG‑TACAGGCTGCGGCCTTGTTCGTGCAGCTCCTTGGCGAATTCCACGATCAGAATGGCGTTTTTAGCCGCAAGACCGATGGTGGTCaa                                      >  5:105690/1‑148 (MQ=255)                                                                                                         cAGCGAGGTCATGATGATCGGGCGCAGACGCATGCGGCACGCCTCGATCGCTGCGTCG‑TACAGGCTGCGGCCTTGTTCGTGCAGCTCCTTGGCGAATTCCACGATCAGAATGGCGTTTTTCGCCGCAAGACCGATGGTGGTCAACAGGc                                 <  4:86948/149‑1 (MQ=255)                                                                                                         cAGCGAGGTCATGATGATCGGGCGCAGACGCATGCGGCACGCCTCGATCGCTGCGTCG‑TACAGGCTGCGGCCTTGTTCGTGCAGCTCCTTGGCGAATTCCACGATCAGAATGGCGTTTTTCGCCGCAAGACCGATGGTGGTCAACAGGc                                 <  3:54035/149‑1 (MQ=255)                                                                                                          aGCGAGGTCATGATGATCGGGCGCAGACGCATGCGGCACGCCTCGATCGCTGCGTCG‑TACAGGCTGCGGCCTTGTTCGTGCAGCTCCTTGGCGAATTCCACGATCAGAATGGCGTTTTTCGCCGCAAGACCGATGGTGGTCAACAGGc                                 >  2:148344/1‑148 (MQ=255)                                                                                                            cGAGGTCATGATGATCGGGCGCAGACGCATGCGGCACGCCTCGATCGCTGCGTCG‑TACAGGCTGCGGCCTTGTTCGTACAGCTCCTTGGCGAATTCCACGATCAGAATGGCGTTTTTCGCCGCAAGACCGATGGTGGTCAACAGGCCaa                              >  1:246831/1‑149 (MQ=255)                                                                                                             gAGGTCATGATGATCGGGCGCAGACGCATGCGGCACGCCTCGATCGCTGCGTCG‑TACAGGCTGCGGCCTTGTTCGTGCAGCTCCTTGGCGAATTCCACGATCAGAATGGCGTTTTTCGCCGCAAGACCGATGGTGGTCAACAGGCCAAc                             >  7:188153/1‑149 (MQ=255)                                                                                                               ggTCATGATGATCGGGCGCAGACGCATGCGGCACGCCTCGATCGCTGCGTCG‑TACAGGCTGCGGCCTTGTTCGTGCAGCTCCTTGGCGAATTCCACGATCAGAATGGCGTTTTTCGCCGCAAGACCGATGGTGGTCAACAGGCCAACCa                           <  2:69506/149‑1 (MQ=255)                                                                                                                   atgatgATCGGGCGCAGACGCATGCGGCACGCCTCGATCGCTGCGTCG‑TACAGGCTGCGGCCTTGTTCGTGCAGCTCCTTGGCGAATTCCACGATCAGAATGGCGTTTTTCGCCGCAAGACCGATGGTGGTCAACAGGCCAACCAgg                         >  1:303273/1‑147 (MQ=255)                                                                                                                   atgatgATCGGGCGCAGACGCATGCGGCACGCCTCGATCGCTGCGTCG‑TACAGGCTGCGGCCTTGTTCGTGCAGCTCCTTGGCGAATTCCACGATCAGAATGGCGTTTTTCGCCGCAAGACCGATGGTGGTCAACAGGCCAACCAGGaa                       <  7:10661/149‑1 (MQ=255)                                                                                                                     gatgatCGGGCGCAGACGCATGCGGCACGCCTCGATCGCTGCGTCG‑TACAGGCTGCGGCCTTGTTCGTGCAGCTCCTTGGCGAATTCCACGATCAGAATGGCGTTTTTCGCCGCAAGACCGATGGTGGTCAACAGGCCAACCAGGAAg                      >  8:31004/1‑148 (MQ=255)                                                                                                                       tgatCGGGCGCAGACGCATGCGGCACGCCTCGATCGCTGCGTCG‑TACAGGCTGCGGCCTTGTTCGTGCAGCTCCTTGGCGAATTCCACGATCAGAATGGCGTTTTTCGCCGCAAGACCGATGGTGGTCAACAGGCCAACCAGGAAGTac                   <  1:119770/149‑1 (MQ=255)                                                                                                                             ggCGCAGACGCATGCGGCACGCCTCGATCGCTGCGTCG‑TACAGGCTGCGGCCTTGTTCGTGCAGCTCCTTGGCGAATTCCACGATCAGAATGGCGTTTTTCGCCGCAAGACCGATGGTGGTCAACAGGCCAACCAgg                         <  3:41126/137‑1 (MQ=255)                                                                                                                             ggCGCAGACGCATGCGGCACGCCTCGATCGCTGCGTCG‑TACAGGCTGCGGCCTTGTTCGTGCAGCTCCTTGGCGAATTCCACGATCAGAATGGCGTTTTTCGCCGCAAGACCGATGGTGGTCAACAGGCCAACCAgg                         >  4:41126/1‑137 (MQ=255)                                                                                                                              gcgcAGACGCATGCGGCACGCCTCGATCGCTGCGTCG‑TACAGGCTGCGGCCTTGTTCGTg                                                                                                     >  2:119897/1‑60 (MQ=255)                                                                                                                              gcgcAGACGCATGCGGCACGCCTCGATCGCTGCGTCG‑TACAGGCTGCGGCCTTGTTCGTg                                                                                                     <  1:119897/60‑1 (MQ=255)                                                                                                                                gcAGACGCATGCGGCACGCCTCGATCGCTGCGTCG‑TACAGGCTGCGGCCTTGTTCGTGCAGCTCCTTGGCGAATTCCACGATCAGAATGGCGTTTTTCGCCGCAAGACCGAtggtg                                           >  3:53190/1‑116 (MQ=255)                                                                                                                                gcAGACGCATGCGGCACGCCTCGATCGCTGCGTCG‑TACAGGCTGCGGCCTTGTTCGTGCAGCTCCTTGGCGAATTCCACGATCAGAATGGCGTTTTTCGCCGCAAGACCGAtggtg                                           <  4:53190/116‑1 (MQ=255)                                                                                                                                gcAGACGCATGCGGCACGCCTCGATCGCTGCGTCG‑TACAGGCTGCGGCCTTGTTCGTGCAGCTCCTTGGCGAATTCCACGATCAGAATGGCGTTTTTCGCCGCAAGACCGATGGTGGTCAACAGGCCAACCAGGAAGTACACGTCGTTg          <  6:249105/149‑1 (MQ=255)                                                                                                                                 cAGACGCATGCGGCACGACACGATCCCTGCGTCG‑TACACGCTCCGGCCTTGTTCGTGCAGCTCAATCGCGAATTCCACGATCAGAATGGCGTTTTTCCCCGCAAGACAGATGCAGGTCAACAGGCCAACCAGCAAGTAAACTTCGATg          >  2:290536/1‑148 (MQ=255)                                                                                                                                        aTGCGGCACGCCTCGATCGCTGCGTCG‑TACAGGCTGCGGCCTTGTTCGTGCAGCTCCTTGGCGAATTCCACGATCAGAATGGCGTTTTTCGCCGCAAGACCGATGGTGGTCAACAGGCCAACCAGGAAGTACACGTCGTTGGACAGGcc  >  5:239978/1‑149 (MQ=255)                                                                                                                                                |                                                                                                                                              GTCGCACTGATCATGCCGCCGATCACGCCAGTACCGATGGCGTGCTGGCTGCCGGCGCCGGCGCCGCTGGCGATGGTCAACGGTACCACGCCCAGGATGAACGCCAGCGAGGTCATGATGATCGGGCGCAGACGCATGCGGCACGCCTCGATCGCTGCGTCG‑TACAGGCTGCGGCCTTGTTCGTGCAGCTCCTTGGCGAATTCCACGATCAGAATGGCGTTTTTCGCCGCAAGACCGATGGTGGTCAACAGGCCAACCAGGAAGTACACGTCGTTGGACAGGCC  >  NC_002947/1578362‑1578645

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.