New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1578505 =	56 (1.140)	3 (0.060)	3/254	NT	5.4%	coding (2892/3153 nt)	ttgB	efflux pump membrane protein TtgB
	?	NC_002947	1578560 =	50 (1.050)					coding (2837/3153 nt)	ttgB	efflux pump membrane protein TtgB

CCGGCGCCGGCGCCGCTGGCGATGGTCAACGGTACCACGCCCAGGATGAACGCCAGCGAGGTCATGATGATCGGGCGCAGACGCATGCGGCACGCCTCGATCGCTGCGTCGTACAGGCTGCGGCCTTGTTCGTGCAGCTCCTTGGCGAATTCCACGATCAGAATGGCGTTTTTCGCCGCAAGACCGATGGTGGTCAACAGGCCAACCAGGAAGTACACGTCGTTGGACAGGCCGCGCAGGCTGGTGGCGATCAGCGCACCGATGATACCCAGCGGTACTACCAGCACCAC  >  NC_002947/1578413‑1578702                                                                                                                                                    |                                                                                                                                               ctgcgcggcctgtccaacgacgtgtacttcctggttggcctgttgaccaccatcggtcttgcggcgaaaaacgccattctgatcgtggaattCGCCTCGATCGCTGCGTCGTACAGGCTGCGGCCTTGTTCGTGCAGCTCCTTGGCGaa                                                                                                                                               >  4:298748‑M1/93‑149 (MQ=255)  cggcgccggcgcCGCTGGCGATGGTCAACGGTACCACGCCCAGGATGAACGCCAGCGAGGTCATGATGATCGGGCGCAGACGCATGCGGCACGCCTCGATCGCTGCGTCGTACAGGCTGCGGCCTTGTTCGTGCAGCTCCTTGGCGAAt                                                                                                                                              <  2:285567/149‑1 (MQ=255)      gccggcgccgCTGGCGATGGTCAACGGTACCACGCCCAGGATGAACGCCAGCGAGGTCATGATGATCGGGCGCAGACGCATGCGGCACGCCTCGATCGCTGCGTCGTACAGGCTGCGGCCTTGTTCGTGCAGCTCCTTGGCGAATTCCa                                                                                                                                          <  7:18887/149‑1 (MQ=255)      gccggcgccgCTGGCGATGGTCAACGGTACCACGCCCAGGATGAACGCCAGCGAGGTCATGATGATCGGGCGCAGACGCATGCGGCACGCCTCGATCGCTGCGTCGTACAGGCTGCGGCCTTGTTCGTGCAGCTCCTTGGCGAATTCCa                                                                                                                                          <  4:78438/149‑1 (MQ=255)        gcctgtccaacgacgtgtacttcctggttggcatgttgaccaccatcggtcttgcggcgaaaaacgccattctgatcgtggaattCGCCTCGATCGCTGCGTCGTACAGGCTGCGGCCTTGTTCGTGCAGCTCCTTGGCGAATTCCACg                                                                                                                                        >  3:104002‑M1/86‑149 (MQ=255)        cggcgccgCTGGCGATGGTCAACGGTACCACGCCCAGGATGAACGCCAGCGAGGTCATGATGATCGGGCGCAGACGCATGCGGCACGCCTCGATCGCTGCGTCGTACAGGCTGCGGCCTTGTTCGTGCAGCTCCTTGGCGAATTCCACg                                                                                                                                        <  8:147151/149‑1 (MQ=255)                 tGGCGATGGTCAACGGTACCACGCCCAGGATGAACGCCAGCGAGGTCATGATGATCGGGCGCAGACGCATGCGGCACGCCTCGATCACTGCGTCGTACAGGCTGCGGCCTTGTTCGTGCAGCTCCTTGGCGAATTCCACGATCAGAATg                                                                                                                               <  2:97365/149‑1 (MQ=255)                   gCGATGGTCAACGGTACCACGCCCAGGATGAACGCCAGCGAGGTCATGATGATCGGGCGCAGACGCATGCGGCACGCCTCGATCGCTGCGTCGTACAGGCTGCGGCCTTGTTCGTGCAGCTCCTTGGCGAATTCCACGATCAGAATGGc                                                                                                                             <  4:279917/149‑1 (MQ=255)                       tGGTCAACGGTACCACGCCCAGGATGAACGCCTGCGAGGTCATGATGATCGGGCGCAGACGCATGCGGCACGCCTCGATCGCTGCGTCGTACAGGCTGCGGCCTTGTTCGTGCAGCTCCTTGGCGAATTCCACGATCAGAATGGCGttt                                                                                                                         <  8:114453/149‑1 (MQ=255)                          tCAACGGTACCACGCCCAGGATGAACGCCAGCGAGGTCATGATGAACGGGCGCAGACGCATGCGGCACGCCTCGATCGCTGCGTCGTACAGGCTGCGGCCTTGTTCGTGCAGCTCCTTGGCGAATTCCACGATCAGAATGGCGTTTTTc                                                                                                                      >  1:219487/1‑149 (MQ=255)                           cAACGGTACCACGCCCAGGATGAACGCCAGCGAGGTCATGATGATCGGGCGCAGACGCATGCGGCACGCCTCGATCGCTGCGTCGTACAGGCTGCGGCCTTGTTCGTGCAGCTCCTTGGCGAATTCCACGATCAGAATGGCGTTTTTcg                                                                                                                     >  2:105977/1‑149 (MQ=255)                                 tACCACGCCCAGGATGAACGCCAGCGAGGTCATGATGATCGGGCGCAGACGCATGCGGCACGCCTCGATCGCTGCGTCGTACAGGCTGCGGCCTTGTTCGTGCAGCTCCTTGGCGAATTCCACGATCAGAATGGCGTTTTTCGCCGCaa                                                                                                               <  7:90235/149‑1 (MQ=255)                                  aCCACGCCCAGGATGAACGCCAGCGAGGTCATGATGATCGGGCGCAGACGCATGCGGCACGCCTCGATCGCTGCGTCGTACAGGCTGCGGCCTTGTTCGTGCAGCTCCTTGGCGAATTCCACGATCAGAATGGCGTTTTTcgccgc                                                                                                                 >  6:179291/1‑146 (MQ=255)                                   ccACGCCCAGGATGAACGCCAGCGAGGTCATGATGATCGGGCGCAGACGCATGCGGCACGCCTCGATCGCTGCGTCGTACAGGCTGCGGCCTTGTTCGTGCAGCTCCTTGGCGAATTCCACGATCAGAATGGCGTTTTTCGCCGCAAGa                                                                                                             >  3:86948/1‑149 (MQ=255)                                      cGCCCAGGATGAACGCCAGCGAGGTCATGATGATCGGGCGCAGACGCATGCGGCACGCCTCGATCGCTGCGTCGTACAGGCTGCGGCCTTGTTCGTGCAGCTCCTTGGCGAATTCCACGATCAGAATGGCGTTTTTCGCCGCAAGAcc                                                                                                           >  4:54035/1‑148 (MQ=255)                                        cccAGGATGAACGCCAGCGAGGTCATGATGATCGGGCGCAGACGCATGCGGCACGCCTCGATCGCTGCGTCGTACAGGCTGCGGCCTTGTTCGTGCAGCTCCTTGGCGAATTCCACGATCAGAATGGCGTTTTTCGCCGCAAGACCGAt                                                                                                        <  1:239900/149‑1 (MQ=255)                                         ccAGGATGAACGCCAGCGAGGTCATGATGATCGGGCGCAGACGCATGCGGCACGCCTCGATCGCTGCGTCGTACAGGCTGCGGCCTTGTTCGTGCAGCTCCTTGGCGAATTCCACGATCAGAATGGCGTTTTTCGCCGCAAGACCGAtg                                                                                                       >  5:249105/1‑149 (MQ=255)                                                gAACGCCAGCGAGGTCATGATGATCGGGCGCAGACGCATGCGGCACGCCTCGATCGCTGCGTCGTACAGGCTGCGGCCTTGTTCGTGCAGCTCCTTGGCGAATTCCACGATCAGAATGGCGTTTTTCGCCGCAAGACCGATGGTGGTc                                                                                                 <  2:219487/148‑1 (MQ=255)                                                 aaggCCAGCGAGGTCATGATGATCGGGCGCAGACGCATGCGGCACGCCTCGATCGCTGCGTCGTACAGGCTGCGGCCTTGTTCGTGCAGCTCCTTGGCGAATTCCACGATCAGAATGGCGTTTTTCGCCGCAAGACCGATGGTGGTCaa                                                                                               <  8:73938/146‑1 (MQ=255)                                                  aCGCCAGCGAGGTCATGATGATCGGGCGCAGACGCATGCGGCACGCCTCGATCGCTGCGTCGTACAGGCTGCGGCCTTGTTCGTGCAGCTCCTTGGCGAATTCCACGATCAGAATGGCGTTTTTAGCCGCAAGACCGATGGTGGTCaa                                                                                               >  5:105690/1‑148 (MQ=255)                                                      cAGCGAGGTCATGATGATCGGGCGCAGACGCATGCGGCACGCCTCGATCGCTGCGTCGTACAGGCTGCGGCCTTGTTCGTGCAGCTCCTTGGCGAATTCCACGATCAGAATGGCGTTTTTCGCCGCAAGACCGATGGTGGTCAACAGGc                                                                                          <  4:86948/149‑1 (MQ=255)                                                      cAGCGAGGTCATGATGATCGGGCGCAGACGCATGCGGCACGCCTCGATCGCTGCGTCGTACAGGCTGCGGCCTTGTTCGTGCAGCTCCTTGGCGAATTCCACGATCAGAATGGCGTTTTTCGCCGCAAGACCGATGGTGGTCAACAGGc                                                                                          <  3:54035/149‑1 (MQ=255)                                                       aGCGAGGTCATGATGATCGGGCGCAGACGCATGCGGCACGCCTCGATCGCTGCGTCGTACAGGCTGCGGCCTTGTTCGTGCAGCTCCTTGGCGAATTCCACGATCAGAATGGCGTTTTTCGCCGCAAGACCGATGGTGGTCAACAGGc                                                                                          >  2:148344/1‑148 (MQ=255)                                                         cGAGGTCATGATGATCGGGCGCAGACGCATGCGGCACGCCTCGATCGCTGCGTCGTACAGGCTGCGGCCTTGTTCGTACAGCTCCTTGGCGAATTCCACGATCAGAATGGCGTTTTTCGCCGCAAGACCGATGGTGGTCAACAGGCCaa                                                                                       >  1:246831/1‑149 (MQ=255)                                                          gAGGTCATGATGATCGGGCGCAGACGCATGCGGCACGCCTCGATCGCTGCGTCGTACAGGCTGCGGCCTTGTTCGTGCAGCTCCTTGGCGAATTCCACGATCAGAATGGCGTTTTTCGCCGCAAGACCGATGGTGGTCAACAGGCCAAc                                                                                      >  7:188153/1‑149 (MQ=255)                                                            ggTCATGATGATCGGGCGCAGACGCATGCGGCACGCCTCGATCGCTGCGTCGTACAGGCTGCGGCCTTGTTCGTGCAGCTCCTTGGCGAATTCCACGATCAGAATGGCGTTTTTCGCCGCAAGACCGATGGTGGTCAACAGGCCAACCa                                                                                    <  2:69506/149‑1 (MQ=255)                                                                atgatgATCGGGCGCAGACGCATGCGGCACGCCTCGATCGCTGCGTCGTACAGGCTGCGGCCTTGTTCGTGCAGCTCCTTGGCGAATTCCACGATCAGAATGGCGTTTTTCGCCGCAAGACCGATGGTGGTCAACAGGCCAACCAgg                                                                                  >  1:303273/1‑147 (MQ=255)                                                                atgatgATCGGGCGCAGACGCATGCGGCACGCCTCGATCGCTGCGTCGTACAGGCTGCGGCCTTGTTCGTGCAGCTCCTTGGCGAATTCCACGATCAGAATGGCGTTTTTCGCCGCAAGACCGATGGTGGTCAACAGGCCAACCAGGaa                                                                                <  7:10661/149‑1 (MQ=255)                                                                  gatgatCGGGCGCAGACGCATGCGGCACGCCTCGATCGCTGCGTCGTACAGGCTGCGGCCTTGTTCGTGCAGCTCCTTGGCGAATTCCACGATCAGAATGGCGTTTTTCGCCGCAAGACCGATGGTGGTCAACAGGCCAACCAGGAAg                                                                               >  8:31004/1‑148 (MQ=255)                                                                    tgatCGGGCGCAGACGCATGCGGCACGCCTCGATCGCTGCGTCGTACAGGCTGCGGCCTTGTTCGTGCAGCTCCTTGGCGAATTCCACGATCAGAATGGCGTTTTTCGCCGCAAGACCGATGGTGGTCAACAGGCCAACCAGGAAGTac                                                                            <  1:119770/149‑1 (MQ=255)                                                                          ggCGCAGACGCATGCGGCACGCCTCGATCGCTGCGTCGTACAGGCTGCGGCCTTGTTCGTGCAGCTCCTTGGCGAATTCCACGATCAGAATGGCGTTTTTCGCCGCAAGACCGATGGTGGTCAACAGGCCAACCAgg                                                                                  <  3:41126/137‑1 (MQ=255)                                                                          ggCGCAGACGCATGCGGCACGCCTCGATCGCTGCGTCGTACAGGCTGCGGCCTTGTTCGTGCAGCTCCTTGGCGAATTCCACGATCAGAATGGCGTTTTTCGCCGCAAGACCGATGGTGGTCAACAGGCCAACCAgg                                                                                  >  4:41126/1‑137 (MQ=255)                                                                             gcAGACGCATGCGGCACGCCTCGATCGCTGCGTCGTACAGGCTGCGGCCTTGTTCGTGCAGCTCCTTGGCGAATTCCACGATCAGAATGGCGTTTTTCGCCGCAAGACCGAtggtg                                                                                                    <  4:53190/116‑1 (MQ=255)                                                                             gcAGACGCATGCGGCACGCCTCGATCGCTGCGTCGTACAGGCTGCGGCCTTGTTCGTGCAGCTCCTTGGCGAATTCCACGATCAGAATGGCGTTTTTCGCCGCAAGACCGAtggtg                                                                                                    >  3:53190/1‑116 (MQ=255)                                                                             gcAGACGCATGCGGCACGCCTCGATCGCTGCGTCGTACAGGCTGCGGCCTTGTTCGTGCAGCTCCTTGGCGAATTCCACGATCAGAATGGCGTTTTTCGCCGCAAGACCGATGGTGGTCAACAGGCCAACCAGGAAGTACACGTCGTTg                                                                   <  6:249105/149‑1 (MQ=255)                                                                              cAGACGCATGCGGCACGACACGATCCCTGCGTCGTACACGCTCCGGCCTTGTTCGTGCAGCTCAATCGCGAATTCCACGATCAGAATGGCGTTTTTCCCCGCAAGACAGATGCAGGTCAACAGGCCAACCAGCAAGTAAACTTCGATg                                                                   >  2:290536/1‑148 (MQ=255)                                                                                    cgtggaattcgccaaggagctgcacgaacaaggccgcagcctgtacgacgcagcgatcgaggcgAATTCCACGATCAGAATGGCGTTTTTCGCCGCAAGACCGATGGTGGTCAACATGCCAACCAGGAAGTACACGTCGTTGGACAGGc                                                            >  3:104002‑M2/65‑149 (MQ=255)                                                                                     aTGCGGCACGCCTCGATCGCTGCGTCGTACAGGCTGCGGCCTTGTTCGTGCAGCTCCTTGGCGAATTCCACGATCAGAATGGCGTTTTTCGCCGCAAGACCGATGGTGGTCAACAGGCCAACCAGGAAGTACACGTCGTTGGACAGGcc                                                           >  5:239978/1‑149 (MQ=255)                                                                                           ttcgccaaggagctgcacgaacaaggccgcagcctgtacgacgcagcgatcgaggcgAATTCCACGATCAGAATGGCGTTTTTCGCCGCAAGACCGATGGTGGTCAACAGGCCAACCAGGAAGTACACGTCGTTGGACAGGCCGCGCAg                                                     >  4:298748‑M2/58‑149 (MQ=255)                                                                                                CTCGATCGCTGCGTCGTACAGGCTGCGGCCTTGTTCGTACAGCTCCTTGGCGAATTCCACGATCAGAATGGCGTTTTTCGCCGCAAGACCGATGGTGGTCAACAGGCCAACCAGGAAGTACACGTCGTTGGACAGGCCGCGCAGGCTgg                                                >  2:246831‑M1/1‑149 (MQ=255)                                                                                                  aggagctgcacgaacaaggccgcagcctgtacgacgcagcgatcgaggcgAATTCCACGATCAGAATGGCGTTTTTCGCCGCAAGACCGATGGTGGTCAACAGGCCAACCAGGAAGTACACGTCGTTGGACAGGCCGCGCAGGCtggtg                                              <  3:298748‑M2/99‑1 (MQ=255)                                                                                                      cGCTGCGTCGTACAGGCTGCGGCCTTGTTCGTGCAGCTCCTTGGCGAATTCCACGATCAGAATGGCGTTTTTCGCCGCAAGACCGATGGTGGTCAACAGGCCAACCAGGAAGTACACGTCGTTGGACAGGCCGCGCAGGCTGGTGGCGa                                          >  3:255160/1‑149 (MQ=255)                                                                                                         tGCGTCGTACAGGCTGCGGCCTTGTTCGTGCAGCTCCTTGGCGAATTCCACGATCAGAATGGCGTTTTTCGCCGCAAGACCGATGGTGGTCAACAGGCCAACCAGGAAGTACACGTCGTTGGACAGGCCGCGCAGGCTGGTGGCGAt                                         >  6:84385/1‑147 (MQ=255)                                                                                                                  cAGGCTGCGGCCTTGTTCGTGCAGCTCCTTGGCGAATTCCACGATCAGAATGGCGTTTTTCGCCGCAAGACCGATGGTGGTCAACAGGCCAACCAGGAAGTACACGTCGTTGGACAGGCCGCGCAGGCTGGTGGCGATCAGCGCACCg                               <  1:148344/148‑1 (MQ=255)                                                                                                                   aGGCTGCGGCCTTGTTCGTGCAGCTCCTTGGCGAATTCCACGATCAGAATGGCGTTTTTCGCCGCAAGACCGATGGTGGTCAACAGGCCAACCAGGAAGTACACGTCGTTGGACAGGCCGCGCAGGCTGGTGGCGATCAgc                                     >  5:38376/1‑141 (MQ=255)                                                                                                                   aGGCTGCGGCCTTGTTCGTGCAGCTCCTTGGCGAATTCCACGATCAGAATGGCGTTTTTCGCCGCAAGACCGATGGTGGTCAACAGGCCAACCAGGAAGTACACGTCGTTGGACAGGCCGCGCAGGCTGGTGGCGATCAgc                                     <  6:38376/141‑1 (MQ=255)                                                                                                                   aGGCTGCGGCCTTGTTCGTGCAGCTCCTTGGCGAATTCCACGATCAGAATGGCGTTTTTCGCCGCAAGACCGATGGTGGTCAACAGGCCAACCAGGAAGTACACGTCGTTGGACAGGCCGCGCAGGCTGGTGGCGATCAGCGCACCgat                             <  5:84385/149‑1 (MQ=255)                                                                                                                    gggtGCGGCCTTGTTCGTGCAGCTGCTTGGCGAATTCCACCATCAGAATGGCGTTTTTCGCCGCAAGACCGATTGTTGTCAACAGGCCAACCAGGAAGTACACGTCGTTGGACAGGCCGCGCAGGCTGGTGGCGATCAGCGCACCgatg                            <  6:105690/146‑1 (MQ=255)                                                                                                                     gCTGCGGCCTTGTTCGTGCAGCTCCTTGGCGAATTCCACGATCAGAATGGCGTTTTTCGCCGCAAGACCGAtggtg                                                                                                    <  7:34282/76‑1 (MQ=255)                                                                                                                     gCTGCGGCCTTGTTCGTGCAGCTCCTTGGCGAATTCCACGATCAGAATGGCGTTTTTCGCCGCAAGACCGAtggtg                                                                                                    >  8:34282/1‑76 (MQ=255)                                                                                                                         cGGCCTTGTTCGTGCAGCTCCTTGGCGAATTCCACGATCAGAATGGCGTTTTTCGCCGCAAGACCGATGGTGGTCAACAGGCCAACCAGGAAGTACACGTCGTTGGACAGGCCGCGCAGGCTGGTGGCGATCAGCGCACCGATGATAcc                       <  1:147304/149‑1 (MQ=255)                                                                                                                          ggCCTTGTTCGTGCAGCTCCTTGGCGAATTCCACGATCAGAATGGCGTTTTTCGCCGCAAGACCGATGGTGGTCAACAGGCCAACCAGGAAGTACACGTCGTTGGACAGGCCGCGCAGGCtggtgg                                             >  7:270905/1‑126 (MQ=255)                                                                                                                          ggCCTTGTTCGTGCAGCTCCTTGGCGAATTCCACGATCAGAATGGCGTTTTTCGCCGCAAGACCGATGGTGGTCAACAGGCCAACCAGGAAGTACACGTCGTTGGACAGGCCGCGCAGGCtggtgg                                             <  8:270905/126‑1 (MQ=255)                                                                                                                                     tGCAGCTCCTTGGCGAATTCCACGATCAGAATGGCGTTTTTCGCCGCAAGACCGATGGTGGTCAACAGGCCAACCAGGAAGTACACGTCGTTGGACAGGCCGCGCAGGCTGGTGGCGATCAGCGCACCGATGATACCCAGCGGtactac           <  7:31004/149‑1 (MQ=255)                                                                                                                                     tGCAGCTCCTTGGAGAATTCCACGATCAGAATGGAGTTTTTCGCCGCAAGACCGATTGTGGTCAACAGGCCAACCAGTAAGTACACGTCGTTGGTCAGGCCGCGCAGGCTGGTGGCGATCAGCGCACCGATGATACCCAGCGGtactac           <  1:290536/149‑1 (MQ=255)                                                                                                                                         gCTCCTTGGCGAATTCCACGATCAGAATGGCGTTTTTCGCCGCAAGACCGATGGTGGTCAACAGGCCAACCAGGAAGTACACGTCGTTTGACAGGCCGCGCAGGCTGGTGGCGATCAGCGCACCGATGATACCCAGCGGTACTACCAg        >  5:143343/1‑148 (MQ=255)                                                                                                                                         gCTCCTTGGCGAATTCCACGATCAGAATGGCGTTTTTCGCCGCAAGACCGATGGTGGTCAACAGGCCAACCAGGAAGTACACGTCGTTGGACAGGCCGCGCAGGCTGGTGGCGATCAGCGCACCGATGATACCCAGCGGTACTACCAg        >  5:12217/1‑148 (MQ=255)                                                                                                                                           atcgaggcgAATTCCACGATCAGAATGGCGTTTTTCGCCGCAAGACCGATGGTGGTCAACATGCCAACCAGGAAGTACACGTCGTTGGACAGGCCGCGCAGGCTGGTGGCGATCAGCGCACCGATGATACCCAGCGGTACTACCAGcac     <  4:104002‑M2/140‑1 (MQ=255)                                                                                                                                             cTTGGCGAATTCCACGATCAGAATGGCGTTTTTCGCCGCAAGACCGATGGTGGTCAACAGGCCAACCAGGAAGTACACGTCGTTGGACAGGCCGCGCAGGCTGGTGGCGATCAGCGCACCGATGATACCCAGCGGTACTACCAGcac     <  5:179291/147‑1 (MQ=255)                                                                                                                                                ggcgAATTCCACGATCAGAATGGCGTTTTTCGCCGCAAGACCGATGGTGGTCAACAGGCCAACCAGGAAGTACACGTCGTTGGACAGGCCGCGCAGGCTGGTGGCGATCAGCGCACCGATGATGCCCAGCGGTACTACCAGcaccac  <  8:188153‑M2/143‑1 (MQ=255)                                                                                                                                                  cgAATTCCACGATCAGAATGGCGTTTTTCGCCGCAAGACCGATGGTGGTCAACAGGCCAACCAGGAAGTACACGTCGTTGGACAGGcc                                                           >  6:125760‑M2/3‑88 (MQ=255)                                                                                                                                                  cgAATTCCACGATCAGAATGGCGTTTTTCGCCGCAAGACCGATGGTGGTCAACAGGCCAACCAGGAAGTACACGTCGTTGGACAGGcc                                                           <  5:125760‑M2/86‑1 (MQ=255)                                                                                                                                                   gAATTCCACGATCAGAATGGCGTTTTTCGCCGCAAGACCGATGGTGGTCAACAGGCCAACCAGGAAGTACACGTCGTTGGACAGGCCGCGCAGGCTGGTGGCGATCAGCGCACCGATGATACCCa                     <  6:271101‑M2/124‑1 (MQ=255)                                                                                                                                                   gAATTCCACGATCAGAATGGCGTTTTTCGCCGCAAGACCGATGGTGGTCAACAGGCCAACCAGGAAGTACACGTCGTTGGACAGGCCGCGCAGGCTGGTGGCGATCAGCGCACCGATGATACCCa                     >  5:271101‑M2/2‑125 (MQ=255)                                                                                                                                                    |                                                                                                                                               CCGGCGCCGGCGCCGCTGGCGATGGTCAACGGTACCACGCCCAGGATGAACGCCAGCGAGGTCATGATGATCGGGCGCAGACGCATGCGGCACGCCTCGATCGCTGCGTCGTACAGGCTGCGGCCTTGTTCGTGCAGCTCCTTGGCGAATTCCACGATCAGAATGGCGTTTTTCGCCGCAAGACCGATGGTGGTCAACAGGCCAACCAGGAAGTACACGTCGTTGGACAGGCCGCGCAGGCTGGTGGCGATCAGCGCACCGATGATACCCAGCGGTACTACCAGCACCAC  >  NC_002947/1578413‑1578702

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.