New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2778759 =	29 (0.590)	3 (0.060)	3/256	NT	8.5%	coding (599/924 nt)	PP_2431	LysR family transcriptional regulator
	?	NC_002947	2778819 =	36 (0.750)					coding (539/924 nt)	PP_2431	LysR family transcriptional regulator

ACCGGCCGCGATGTTGGCGCTGACATCCAGCCACGACTTGTAGACGATACCTTCCCCCTGGATGGCCAGGCGGCGGATGACGTCGGCATCGTCACTGACCAGCGGCCCACGCACCTGCACGGTGCGGTTACCCAACTGCCACTTGTCGTACACCCGGCTGTGCTGCATGTACAGCAGACAGGCATGCTGCTGCAGCGC‑GTCGGGGGTAAGCGGGCGGCCGTGGCGGGCCAGGTAGTCGGGCGAGGCCACCAGCACGCGGCGGTTCCATTCGGCCAGTGGCAGGGCGATGTAGTTGG  >  NC_002947/2778611‑2778906                                                                                                                                                     |                                                                                                                                                     tggccgacctcaaccgcgaccctgtggatgtggccatccgctatggcctcaaccaggatgccaactacatcgccctgccactggccgaatggaaccgccgcgtgctggtggcctcgcccgactacctggcccgccacggccgcccgctt                                                                                                                                                      >  5:37130‑M1/149‑149 (MQ=255)  ggccgacctcaaccgcgaccctgtggatgtggccatccgctatggcctcaaccaggatgccaactacatcgccctgccactggccgaatggaaccgccgcgtgctggtggcctcgcccgactacctggcccgccacggccgcccgctTa                                                                                                                                                     <  6:16022‑M1/2‑1 (MQ=255)   gccgacctcaaccgcgaccctgtggatgtggccatccgctatggcctcaaccaggatgccaactacatcgccctgccactggccgaatggaaccgccgcgtgctggtggcctcgcccgactacctggcccgccacggccgcccgctTac                                                                                                                                                    >  7:229756‑M1/147‑149 (MQ=255)     gCCGCGATGTTGGCGCTGACATCCAGCCACGACTTGTAGACGATACCTTCCCCCTGGATGGCCAGGCGGCGGATGACTTCGCCATCGTCACTGACCAGCGGCCCACGCACCTGCACGGTGCGGTTACCCAACTGCCACTTGTCGTacac                                                                                                                                                  >  1:33958/1‑149 (MQ=255)      ccGCGATGTTGGCGCTGACATCCAGCCACGACTTGTAGACGATACCTTCCCCCTGGATGGCCAGGCGGCGGATGACGTCGGCATCGTCACTGACCAGCGGCCCACGCACCTGCACGGTGCGGTTACCCAACTGCCACTTGTCGTACAcc                                                                                                                                                 <  5:29369/149‑1 (MQ=255)         agATGTTGGCGCTGACATCCAGACACGACTTGTAGACGATACCTTCCCACTGGATGGCCAGGCGGCGGATGACGTCGGCATCGTCACTGACCAGCGGCCCACTCACCTGCACGGTGCGGTTACCCAACTGCCACTCGTCGTACACCCgg                                                                                                                                              <  5:102027/148‑1 (MQ=255)                       aCATCCAGCCACGACTTGTAGACGATACCTTCCCCCTGGATGGCCAGGCGGCGGATGACGTCGGCATCGTCACTGACCAGCGGCCCACGCACCTGCACGGTGCGGTTACCCAACTGCCACTTGTCGTACACCCGGCTGtgctgc                                                                                                                                     <  1:258856/144‑1 (MQ=255)                       aCATCCAGCCACGACTTGTAGACGATACCTTCCCCCTGGATGGCCAGGCGGCGGATGACGTCGGCATCGTCACTGACCAGCGGCCCACGCACCTGCACGGTGCGGTTACCCAACTGCCACTTGTCGTACACCCGGCTGtgctgc                                                                                                                                     >  2:258856/1‑144 (MQ=255)                         aTCCAGCCACGACTTGTAGACGATACCTTCCCCCTGGATGGCCAGGCGGCGGATGACGTCGGCATCGTCACTGACCAGCGGCCCACGCACCTGCACGGTGCGGTTACCCAACTGCCACTTGTCGTACACCCGGCTGTGCTGCATGTa                                                                                                                                >  2:172571/1‑147 (MQ=255)                              gCCACGACTTGTAGACGATACCTTCCCCCTGGATGGCCAGGCGGCGGATGACGTCGGCATCGTCACTGACCAGCGGCCCACGCACCTGCACGGTGCGGTTACCCAACTGCCACTTGTCGTACACCCGGCTGtgc                                                                                                                                        >  2:50805/1‑134 (MQ=255)                                     cTTGTAGACGATACCTTCCCCCTGGATGGCCAGGCGGCGGATGACGTCGGCATCGTCACTGACCAGCGGCCCACGCACCTGCACGGTGCGGTTACCCAACTGCCACTTGTCGTACACCCGGCTGTGCTGCATGTACAGCAGACAGGCAt                                                                                                                  <  4:70922/149‑1 (MQ=255)                                               cctcaaccaggatgccaactgcatcgccctgccactggccgaatggaaccgccgcgtgctggtggcctcgcccgactacctggcccgccacggccgcccgctTACACCCGGCTGTGCTGCATGTACAGCAGACAGGCATGCTGCTGCAg                                                                                                        <  8:205679‑M1/47‑1 (MQ=255)                                               aTACCTTCCCCCTGGATGGCCAGGCGGCGGATGACGTCGGCATCGTCACTGACCAGCGGCCCACGCACCTGCACGGTGCGGTTACCCAACTGCCACTTGTCGTACACCCGGCTGTGCTGCATGTACAGCAGACAGGCATGCTGCTGCAg                                                                                                        <  4:23010/149‑1 (MQ=255)                                                   cTTCCCCCTGGATGGCCAGGCGGCGGATGACGTCGGCATCGTCACTGACCAGCGGCCCACGCACCTGCACGGTGCGGTTACCCAACTGCCACTTGTCGTACACCCGGCtg                                                                                                                                           >  8:204942/1‑110 (MQ=255)                                                   cTTCCCCCTGGATGGCCAGGCGGCGGATGACGTCGGCATCGTCACTGACCAGCGGCCCACGCACCTGCACGGTGCGGTTACCCAACTGCCACTTGTCGTACACCCGGCtg                                                                                                                                           <  7:204942/110‑1 (MQ=255)                                                         ccTGGATGGCCAGGCGGCGGATGACGTCGGCATCGTCACTGACCAGCGGCCCACGCACCTGCACGGTGCGGTTACCCAACTGCCACTTGTCGTACACCCGGCTGTGCTGCATGTACAGCAGACAGGCATGCTGCTGCAGCGC‑GTCgggg                                                                                             >  1:149693/1‑149 (MQ=255)                                                           tGGATGGCCAGGCGGCGGATGACGTCGGCATCGTCACTGACCAGCGGCCCACGCACCTGCACGGTGCGGTTACCCAACTGCCACTTGTCGTACACCCGGCTGTGCTGCATGTACAGCAGACAGGCATGCTGCTGCAGCGC‑GTCggggg                                                                                            >  4:161017/1‑148 (MQ=255)                                                                 ctgcatcgccctgccactggccgaatggaaccgccgcgtgctggtggcctcgcccgactacctggcccgccacggccgcccgctTACACCCGGCTGTGCTGCATGTACAGCAGACAGGCATGCTGCTGCAGCGC‑GTCGGGGGTAAgcgg                                                                                     >  7:205679‑M1/85‑149 (MQ=255)                                                                  ccAGGCGGCGGATGACGTCGGCATCGTCACTGACCAGCGGCCCACGCACCTGCACGGTGCGGTTACCCAACTGCCACTTGTCGTACACCCGGCTGTGCTGCATGTACAGCAGACAGGCATGCTGCTGCAGCGC‑GTCGGGGGTAAgcggg                                                                                    >  3:150431/1‑149 (MQ=255)                                                                    catcgccctgccactggccgaatggaaccgccgcgtgctggtggcctcgcccgactacctggcccgccacggccgcccgctTACACCCGGCTGTGCTGCATGTACAGCAGACAGGCATGCTGCTGCAGCGC‑GTCGGGGGTAAgcggg                                                                                    >  7:132997‑M1/82‑147 (MQ=255)                                                                     ggcggcGGATGACGTCGGCATCGTCACTGACCAGCGGCCCACGCACCTGCACGGTGCGGTTACCCAACTGCCACTTGTCGTACACCCGGCTGTGCTGCATGTACAGCAGACAGGCATGCTGCTGCAGCGC‑GTCGGGGGTAAgcgggcgg                                                                                 <  1:172571/149‑1 (MQ=255)                                                                                   tCGGCATCGTCACTGACCAGCGGCCCACGCACCTGCACGGTGCGGTTACCCAACTGCCACTTGTCGTACACCCGGCTGTGCTGCATGTACAGCAGACAGGCATGCTGCTGCAGCGC‑GTCGGGGGTAAGCGGGCGGCCGTGGCGGGCCAg                                                                   >  6:112202/1‑149 (MQ=255)                                                                                                     aGCGGCCCACGCACCTGCACGGTGCGGTTACCCAACTGCCACTTGTCGTACACCCGGCTGTGCTGCATGTACAGCAGACAGGCATGCTGCTGCAGCGC‑GTCGGGGGTAAGCGGGCGGCCGTGGCGGGCCAGGTAGTCGGGCGAGGccac                                                 >  5:16022/1‑149 (MQ=255)                                                                                                                cACCTGCACGGTGCGGTTACCCAACTGCCACTTGTCGTACACCCGGCTGTGCTGCATGTACAGCAGACAGGCATGCTGCTGCAGCGC‑GTCGGGGGTAAGCGGGCGGCCGTGGCGGGCCAGGTAGTCGGGCGAGGCCACCAGCACgcggc                                      >  8:115299/1‑149 (MQ=255)                                                                                                                 aCCTGCACGGTGCGGTTACCCAACTGCCACTTGTCGTACACCCGGCTGTGCTGCATGTACAGCAGACAGGCATGCTGCTGCAGCGC‑GTCGGGGGTAAGCGGGCGGCCGTGGCGGGCCAGGTAGTCGGGCGAGGCCACCAGCACgcggcg                                     >  5:12370/1‑149 (MQ=255)                                                                                                                      cACGGTGCGGTTACCCAACTGCCACTTGTCGTACACCCGGCTGTGCTGCATGTACAGCAGACAGGCATGCTGCTGCAGCGC‑GTCGGGGGTAAGCGGGCGGCCGTGGCGGGCCAGGTAGTCGGGCGAGGCCACCAGCACGCGGCGGTTc                                 <  3:152563/148‑1 (MQ=255)                                                                                                                       aCGGTGCGGTTACCCAACTGCCACTTGTCGTACACCCGGCTGTGCTGCATGTACAGCAGACAGGCATGCTGCTGCAGCGC‑GTCGGGGGTAAGCGGGCGGCCGTGGCGGGCCAGGTAGTCGGGCGAg                                                      >  1:26672/1‑126 (MQ=255)                                                                                                                       aCGGTGCGGTTACCCAACTGCCACTTGTCGTACACCCGGCTGTGCTGCATGTACAGCAGACAGGCATGCTGCTGCAGCGC‑GTCGGGGGTAAGCGGGCGGCCGTGGCGGGCCAGGTAGTCGGGCGAg                                                      <  2:26672/126‑1 (MQ=255)                                                                                                                          gTGCGGTTACCCAACTGCCACTTGTCGTACACCCGGCTGTGCTGCATGTACAGCAGACAGGCATGCTGCTGCAGCGC‑GTCGGGGGTAAGCGGGCGGCCGTGGCGGGCCAGGTAGTCGGGCGAGGCCACCAGCACGCGGCGGTTCCATTc                            >  2:108678/1‑149 (MQ=255)                                                                                                                          gTGCGGTTACCCAACTGCCACTTGTCCTACACCCGGCTGTGCTGCATGTACAGCAGACAGGCATGCTGCTGCAGCGC‑GTCGGGGGTAAGCGGGCGGCCGTGGCGGGCCAGGTAGTCGGGCGAGGCCACCAGCACGCGGCGGTTCCATTc                            <  8:268130/149‑1 (MQ=255)                                                                                                                           tGCGGTTACCCAACTGCCACTTGTCGTACACCCGGCTGTGCTACATGTACAGCAGACAGGCATGCTGCTGCAGCGC‑GTCGGGGGTAAGCGGGCGGCCGTGGCGGGCCAGGTAGTCGGGCGAGGCCACCAGCACGCGGCGGTTCCATTCg                           <  2:33958/149‑1 (MQ=255)                                                                                                                                ttACCCAACTGCCACTTGTCGTACACCCGGCTGTGCTGCATGTACAGCAGACAGGCATGCTGCTGCAGCGC‑GTCGGGGGTAAGCGGGCGGCCGTGGCGGGCCAGGTAGTCGGGCGAGGCCACCAGCACGCGGCGGTTCCATTCGGCCAg                      <  7:115299/149‑1 (MQ=255)                                                                                                                                    ccAACTGCCACTTGTCGTACACCCGGCTGTGCTGCATGTACAGCAGACAGGCATGCTGCTGCAGCGC‑GTCGGGGGTAAGCGGGCGGCCGTGGCGGGCCAGGTAGTCGGGCGAGGCCACCAGCACGCGGCGGTTCCATTCGGCCAGTgg                   >  2:228726/1‑148 (MQ=255)                                                                                                                                             aCTTGTCGTACACCCGGCTGTGCTGCATGTACAGCAGACAGGCATGCTGCTGCAGCGCAAGCGGGGGTAAGCGGGCGGCCGTGGCGGGCCAGGTAGTCGGGCGAGGCCACCAGCCCGCGGCGGTTCCATACGGCCAGTGGCAGGGCGAt          >  1:242794/1‑149 (MQ=255)                                                                                                                                             aCTTGTCGTACACCCGGCTGTGCTGCATGTACAGCAGACAGGCATGCTGCTGCAGCGC‑GTCGGGGGTAAGCGGGCGGCCGTGGCGGGCCAGGTAGTCGGGCGAGGCCACCAGCACGCGGCGGTTCCATTCGGCCAGTGGCAGGGCGATg         >  2:225053/1‑149 (MQ=255)                                                                                                                                             aCTTGTCGTACACCCGGCTGTGCTGCATGTACAGCAGACAGGCATGCTGCTGCAGCGC‑GTCGGGGGTAAGCGGGCGGCCGTGGCGGGCCAGGTAGTCGGGCGAGGCCACCAGCACGCGGCGGTTCCATTCGGCCAGTGGCAGGGCGATg         >  1:226592/1‑149 (MQ=255)                                                                                                                                                    gTACACCCGGCTGTGCTGCATGTACAGCAGACAGGCATGCTCCTGCAGCGC‑GTCGGGGGTAAGCGGGCGGCCGTGGCGGGCCAGGTAGTCGGGCGAGGCCACCAGCACGCGGCGGTTCCATTCGGCCAGTGGCAGGGCGATGTAGTTgg  >  2:91517/1‑149 (MQ=255)                                                                                                                                                     TACACCCGGCTGTGCTGCATGTACAGCAGACAGGCATGCTGCTGCAGCGC‑GTCGGGGGTAAGCGGGCGGCCGTGGCGGGCCAGGTAGTCGGGCGAGGCCACCAGCACGCGGCGGTTCCATTCGGCCAGTGGCAGGGCGATGTAGTTgg  <  4:75881‑M1/148‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                     ACCGGCCGCGATGTTGGCGCTGACATCCAGCCACGACTTGTAGACGATACCTTCCCCCTGGATGGCCAGGCGGCGGATGACGTCGGCATCGTCACTGACCAGCGGCCCACGCACCTGCACGGTGCGGTTACCCAACTGCCACTTGTCGTACACCCGGCTGTGCTGCATGTACAGCAGACAGGCATGCTGCTGCAGCGC‑GTCGGGGGTAAGCGGGCGGCCGTGGCGGGCCAGGTAGTCGGGCGAGGCCACCAGCACGCGGCGGTTCCATTCGGCCAGTGGCAGGGCGATGTAGTTGG  >  NC_002947/2778611‑2778906

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.