New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2866692 =	37 (0.760)	5 (0.110)	3/248	NT	12.0%	coding (85/1263 nt)	glllA	gallate dioxygenase
	?	NC_002947	2866730 =	38 (0.820)					coding (47/1263 nt)	glllA	gallate dioxygenase

TGCTCGTCTACGCCCAGGGTGAAGGCGCTGTAATGGTCAAAGAAGAACGAGGTGATGTGGTCGTTGAAGATATAGAAGAGTACGTCCGGCTGGCGCTGCTGCAGCCACGTGCGGATCGGCTCGAAGCTTTCGAAGATCGGCGCCCAGGCGGCTTCTTCCTGTTTGTCGTGGTCGACTGCGAAGCCGATGGTTGGGGTGTGGGAGACGGCCAGGCCACCAATGATACGAGCCATGCGAAAGTCCTCTGTTACAGGTTACGGCGCGGTTACTGCGGGGGTCGCGCGCAGCCGGGC  >  NC_002947/2866544‑2866836                                                                                                                                                     |                                                                                                                                                 cggcattcgccgctgccctggcgatcctggccaacggccacgcccggctgcgcgcgacccccgcagtaaccgcgccgtaacctgtaacagaggactttcgcatggctcgtatcattggtggcctggccgtctcccacaccccaaccatc                                                                                                                                                  >  3:123407‑M1/149‑149 (MQ=255) cggcattcgccgctgccctggcgatcctggccaacggccacgcccggctgcgcgcgacccccgcagtaaccgcgccgtaacctgtaacagaggactttcgcatggctcgtatcattggtggcctggccgtctcccacaccccaaccatc                                                                                                                                                  >  3:118761‑M1/149‑149 (MQ=255) cggcattcgccgctgccctggcgatcctggccaacggccacgcccggctgcgcgcgacccccgcagtaaccgcgccgtaacctgtaacagaggactttcgcatggctcgtatcattggtggcctggccgtctcccacaccccaaccatc                                                                                                                                                  <  1:48086‑M1/1‑1 (MQ=255)  gCTCGTCTACGCCCAGGGTGAAGGCGCTGTAATGGTCAAAGAAGAACGAGGTGATGTGGTCGTTGAAGATATAGAAGAGTACGTCCGGCTGGCGCTGCTGCAGCCACGTGCGGATCGGCTCGAAGCTTTCGAAGATCGGCGCCCAggcg                                                                                                                                                 >  1:170199/1‑149 (MQ=255)   cTCGTCTACGCCCAGGGTGAAGGCGCTGTAATGGTCAAAGAAGAACGAGGTGATGTGGTCGTTGAAGATATAGAAGAGTACGTCCGGCTGGCGCTGCTGCAGCCACGTGCGGATCGGCTCGAAGCTTTCGAAGATCGGCGCCCAggcgg                                                                                                                                                >  1:128314/1‑149 (MQ=255)    tCGTCTACGCCCAGGGTGAAGGCGCTGTAATGGTCAAAGAAGAACGAGGTGATGTGGTCGTTGAAGATATAGAAGAGTACGTCCGGCTGGCGCTGCTGCAGCCACGTGCGGATCGGCTCGAAGCTTTCGAAGATCGGCGCCCAggcggc                                                                                                                                               >  3:133914/1‑149 (MQ=255)      gTCTACGCCCAGGGTGAAGGCGCTGTAATGGTCAAAGAAGAACGAGGTGATGTGGTCGTTGAAGATATAGAAGAGTACGTCCGGCTGGCGCTGCTGCAGCCACGTGCGGATCGGCTCGAAGCTTTCGAAGATCGGCGCCCAggcggc                                                                                                                                               <  5:236728/147‑1 (MQ=255)          aCGCCCAGGGTGAAGGCGCTGTAATGGTCAAAGAAGAACGAGGTGATGTGGTCGTTGAAGATATAGAAGAGTACGTCCGGCTGGCGCTGCTGCAGCCACGTGCGGATCGGCTCGAAGCTTTCGAAGATCGGCGCCCAGGCGGCttcttc                                                                                                                                         >  4:5318/1‑149 (MQ=255)                    tGAAGGCGCTGTAATGGTCAAAGAAGAACGAGGTGATGTGGTCGTTGAAGATATAGAAGAGTACGTCCGGCTGGCGCTGCTGCAGCCACGTGCGGATCGGCTCGAAGCTTTCGAAGATCGGCGCCCAGGCGGCTTCTTCCTGTTTGTCg                                                                                                                               <  5:161740/149‑1 (MQ=255)                        ggCGCTGTAATGGTCAAAGAAGAACGAGGTGATGTGGTCGTTGAAGATATAGAAGAGTACGTCCGGCTGGCGCTGCTGCAGCCACGTGCGGATCGGCTCGAAGCTTTCGAAGATCGGCGCCCAGGCGGCTTCTTCCTGTTTGTCGTGGt                                                                                                                           <  3:5318/149‑1 (MQ=255)                            cTGTAATGGTCAAAGAAGAACGAGGTGATGTGGTCGTTGAAGATATAGAAGAGTACGTCCGGCTGGCGCTGCTGCAGCCACGTGCGGATCGGCTCGAAGCTTTCGAAGATCGGCGCCCAGGCGGCTTCTTCCTGTTTGTCGTGGTCGAc                                                                                                                       >  6:107505/1‑149 (MQ=255)                                  tGGTCAAAGAAGAACGAGGTGATGTGGTCGTTGAAGATATAGAAGAGTACGTCCGGCTGGCGCTGCTGCAGCCACGTGCGGATCGGCTCGAAGCTTTCGAAGATCGGCGCCCAGGCGGCTTCTTCCTGTTTGTCGTGGTCGACTGCg                                                                                                                   >  7:80629/1‑147 (MQ=255)                                       cacgcccggctgcgcgcgacccccgcagtaaccgcgccgtaacctgtaacagaggactttcgcatggctcgtatcattggtggcctggccgtctcccacaccccaaccatCGGCTTCTTCCTGTTTGTCGTGGTCGACTGCGAAGCCGa                                                                                                            >  4:187016‑M1/111‑149 (MQ=255)                                            ccggctgcgcgcgacccccgcagtaaccgcgccgtaacctgtaacagaggactttcgcatggctcgtatcattggtggcctggccgtctcccacaccccaaccatCGGCTTCTTCCTGTTTGTCGTGGTCGACTGCGAAGCCGATg                                                                                                          <  1:293586‑M1/41‑1 (MQ=255)                                            ccggctgcgcgcgacccccgcagtaaccgcgccgtaacctgtaacagaggactttcgcatggctcgtatcattggtggcctggccgtctcccacaccccaaccatCGGCTTCTTCCTGTTTGTCGTGGTCGACTGCGAAGCCGATg                                                                                                          <  1:289020‑M1/41‑1 (MQ=255)                                            ccggctgcgcgcgacccccgcagtaaccgcgccgtaacctgtaacagaggactttcgcatggctcgtatcattggtggcctggccgtctcccacaccccaaccatCGGCTTCTTCCTGTTTGTCGTGGTCGACTGCGAAGCCGATg                                                                                                          >  2:293586‑M1/106‑146 (MQ=255)                                            ccggctgcgcgcgacccccgcagtaaccgcgccgtaacctgtaacagaggactttcgcatggctcgtatcattggtggcctggccgtctcccacaccccaaccatCGGCTTCTTCCTGTTTGTCGTGGTCGACTGCGAAGCCGATg                                                                                                          >  2:289020‑M1/106‑146 (MQ=255)                                                   ggTGATGTGGTCGTTGAAGATATAGAAGAGTACGTCCGGCTGGCGCTGCTGCAGCCACGTGCGGATCGGCTCGAAGCTTTCGAAGATCGGCGCCCAGGCGGCTTCTTCCTGttt                                                                                                                                   >  8:52586/1‑114 (MQ=255)                                                   ggTGATGTGGTCGTTGAAGATATAGAAGAGTACGTCCGGCTGGCGCTGCTGCAGCCACGTGCGGATCGGCTCGAAGCTTTCGAAGATCGGCGCCCAGGCGGCTTCTTCCTGttt                                                                                                                                   <  7:52586/114‑1 (MQ=255)                                                    gTGATGTGGTCGTTGAAGATATAGAAGAGTACGTCCGGCTGGCGCTGCTGCAGCCACGTGCGGATCGGCTCGAAGCTTTCGAAGATCGGCGCCCAGGCGGCTTCTTCCTGTTTGTCGTGGTCGACTGCGAAGCCGATGGTTGGGGtgtg                                                                                               <  2:128314/149‑1 (MQ=255)                                                      gATGTGGTCGTTGAAGATATAGAAGAGTACGTCCGGCTGGCGCTGCTGCAGCCACGTGCGGATCGGCTCGAAGCTTTCGAAGATCGGCGCCCAGGCGGCTTCTTCCTGTTTGTCGTGGTCGACTGCGAAGCCGATGGTTGGGGTGTgg                                                                                              >  5:14535/1‑148 (MQ=255)                                                       aTGTGGTCGTTGAAGATATAGAAGAGTACGTCCGGCTGGCGCTGCTGCAGCCACGTGCGGATCGGCTCGAAGCTTTCGAAGATCGGCGCCCAGGCGGCTTCTTCCTGTTTGTCGTGGTCGACTGCGAAGCCGATGGTTGGGGTGTgg                                                                                              >  2:9455/1‑147 (MQ=255)                                                          tgGTCGTTGAAGATATAGAAGAGTACGTCCGGCTGGCGCTGCTGCAGCCACGTGCGGATCGGCTCGAAGCTTTCGAAGATCGGCGCCCAGGCGGCTTCTTCCTGTTTGTCGTGGTCGACTGCGAAGCCGATGGTTGGGGTGTGGgaga                                                                                          <  2:170199/148‑1 (MQ=255)                                                            gTCGTTGAAGATATAGAAGAGTACGTCCGGCTGGCGCTGCTGCAGCCACGTGCGGATCGGCTCGAAGCTTTCGAAGATCGGCGCCCAGGCGGCttcttc                                                                                                                                         >  6:98665/1‑99 (MQ=255)                                                            gTCGTTGAAGATATAGAAGAGTACGTCCGGCTGGCGCTGCTGCAGCCACGTGCGGATCGGCTCGAAGCTTTCGAAGATCGGCGCCCAGGCGGCttcttc                                                                                                                                         <  5:98665/99‑1 (MQ=255)                                                            gTCGTTGAAGATATAGAAGAGTACGTCCGGCTGGCGCTGCTGCAGCCACGTGCGGATCGGCTCGAAGCTTTCGAAGATCGGCGCCCAGGCGGCTTCTTCCTGTTTGTCGTGGTCGACTGCGAAGCCGATGGTTGGGGTGTGGGTGACgg                                                                                       >  8:75197/1‑149 (MQ=255)                                                            gTCGTTGAAGATATAGAAGAGTACGTCCGGCTGGCGCTGCTGCAGCCACGTGCGGATCGGCTCGAAGCTTTCGAAGATCGGCGCCCAGGCGGCTTCTTCCTGTTTGTCGTGGTCGACTGCGAAGCCGATGGTTGGGGTGTGGGAGACgg                                                                                       >  8:201735/1‑149 (MQ=255)                                                             tCGTTGAAGATATAGAAGAGTACGTCCGGCTGGCGCTGCTGCAGCCACGTGCGGATCGGCTCGAAGCTTTCGAAGATCGGCGCCCAGGCGGCTTCTTCCTGTTTGTCGTGGTCGACTGCGAAGCCGATGGTTGGGGTGTGGGAGACggc                                                                                      >  5:87741/1‑149 (MQ=255)                                                                ttGAAGATATAGAAGAGTACGTCCGGCTGGCGCTGCTGCAGCCACGTGCGGATCGGCTCGAAGCTTTCGAAGATCGGCGCCCAGGCGGCTTCTTCCTGTTTGTCGTGGTCGACTGCGAAGCCGATGGTTGGGGTGTGGGAGACggccag                                                                                   >  7:48783/1‑149 (MQ=255)                                                                          agaagaGTACGTCCGGCTGGCGCTGCTGCAGCCACGTGCGGATCGGCTCGAAGCTTTCGAAGATCGGCGCCCAGGCGGCTTCTTCCTGTTTGTCGTGGTCGACTGCGAAGCCGATGGTTGGGGTGTGGGAGACggc                                                                                      <  2:85493/136‑1 (MQ=255)                                                                          agaagaGTACGTCCGGCTGGCGCTGCTGCAGCCACGTGCGGATCGGCTCGAAGCTTTCGAAGATCGGCGCCCAGGCGGCTTCTTCCTGTTTGTCGTGGTCGACTGCGAAGCCGATGGTTGGGGTGTGGGAGACggc                                                                                      >  1:85493/1‑136 (MQ=255)                                                                           gaagaGTACGTCCGGCTGGCGCTGCTGCAGCCACGTGCGGATCGGCTCGAAGCTTTCGAAGATCGGCGCCCAGGCGGCTTCTTCCTGTTTGTCGTGGTCGACTGCGAAGCCGATGGTTGGGGTGTGGGAGACGGCCAGGCCACCAATg                                                                         <  4:133914/148‑1 (MQ=255)                                                                            aagaGTACGTCCGGCTGGCGCTGCTGCAGCCACGTGCGGATCGGCTCGAAGCTTTCGAAGATCGGCGCCCAGGCGGCTTCTTCCTGTTTGTCGTGGTCGACTGCGAAGCCGATGGTTGGGGTGTGGGAGACGGCCAGGccac                                                                              >  5:137772/1‑142 (MQ=255)                                                                            aagaGTACGTCCGGCTGGCGCTGCTGCAGCCACGTGCGGATCGGCTCGAAGCTTTCGAAGATCGGCGCCCAGGCGGCTTCTTCCTGTTTGTCGTGGTCGACTGCGAAGCCGATGGTTGGGGTGTGGGAGACGGCCAGGccac                                                                              <  6:137772/142‑1 (MQ=255)                                                                                gTACGTCCGGCTGGCGCTGCTGCAGCCACGTGCGGATCGGCTCGAAGCTTTCGAAGATCGGCGCCCAGGCGGCTTCTTCCTGTTTGTCGTGGTCGACTGCGAAGCCGATGGTTGGGGTGTGGGAGACGGCCAGGCCACCAATGATAc                                                                     >  3:303193/1‑147 (MQ=255)                                                                                 tACGTCCGGCTGGCGCTGCTGCAGCCACGTGCGGATCGGCTCGAAGCTTTCGAAGATCGGCGCCCAGGCGGCTTCTTCCTGTTTGTCGTGGTCGACTGCGAAGCCGATGGTTGGGGTGTGGGAGACGGCCAGGCCACCAATGATACGAg                                                                  >  8:153464/1‑149 (MQ=255)                                                                                   cGTCCGGCTGGCGCTGCTGCAGCCACGTGCGGATCGGCTCGAAGCTTTCGAAGATCGGCGCCCAGGCGGCTTCTTCCTGTTTGTCGTGGTCGACTGCGAAGCCGATGGTTGGGGTGTGGGAGACGGCCAGGCCACCAATGATACGAGc                                                                 <  6:87741/148‑1 (MQ=255)                                                                                    gTCCGGCTGGCGCTGCTGCAGCCACGTGCGGATCGGCTCGACGCTTTCGAAGATCGGCGCCCAGGCGGCTTCTTCCTGTTTGTCGTGGTCGAGTGCGAAGCCGATGGGTGGGGTGTGGGAGACGGCCAGGCCACCAATGAAACGAGCCa                                                               >  5:191437/1‑149 (MQ=255)                                                                                                   ctgcAGCCACGTGCGGATCGGCTCGAAGCTTTCGAAGATCGGCGCCCAGGCGGCTTCTTCCTGTTTGTCGTGGTCGACTGCGAAGCCGATGGTTGGGGTGTGGGAGACGGCCAGGCCACCAATGATACGAGCCATGCGAAAGTCCTCTg                                                >  5:271931/1‑149 (MQ=255)                                                                                                        gCCACGTGCGGATCGGCTCGAAGCTTTCGAAGATCGGCGCCCAGGCGGCTTCTTCCTGTTTGTCGTGGTCGACTGCGAAGCCGATGGTTGGGGTGTGGGAGACGGCCAGGCCACCAATGATACGAGCCATGCGAAAGTCCTCTGTTACa                                           <  7:153464/149‑1 (MQ=255)                                                                                                        gCCACGTGCGGATCGGCTCGAAGCTTTCGAAGATCGGCGCCCAGGCGGCTTCTTCCTGTTTGTCGTGGTCGACTGCGAAGCCGATGGTTGGGGTGTGGGAGACGGCCAGGCCACCAATGATACGAGCCATGCGAAAGTCCTCTGTTACa                                           <  8:80629/149‑1 (MQ=255)                                                                                                         ccACGTGCGGATCGGCTCGAAGCTTTCGAAGATCGGCGCCCAGGCGGCTTCTTCCTGTTTGTCGTGGTCGACTGCGAAGCCGATGGTTGGGGTGTGGGAGACGGCCAGGCCACCAATGATACGAGCCATGCGAAAGTCCTCTGTTACAg                                          >  1:10133/1‑149 (MQ=255)                                                                                                         ccACGTGCGGATCGGCTCGAAGCTTTCGAAGATCGGCGCCCAGGCGGCTTCTTCCTGTTTGTCGTGGTCGACTGCGAAGCCGATGGTTGGGGTGTGGGAGACGGCCAGGCCACCAATGATACGAGCCATGCGAAAGTCCTCTGTTACAg                                          <  2:10133/149‑1 (MQ=255)                                                                                                           aCGTGCGGATCGGCTCGAAGCTTTCGAAGATCGGCGCCCAGGCGGCTTCTTCCTGTTTGTCGTGGTCGACTGCGAAGCCGATGGTTGGGGTGTGGGAGACGGCCAGGCCACCAATGATATGAGCCATGCGAAAGTCctct                                                 >  6:94023/1‑140 (MQ=255)                                                                                                           aCGTGCGGATCGGCTCGAAGCTTTCGAAGATCGGCGCCCAGGCGGCTTCTTCCTGTTTGTCGTGGGCGACTGCGAAGCCGATGGTTGGGGTGTGGGAGACGGCCAGGCCACCAATGATATGAGCCATGCGAAAGTCctct                                                 <  5:94023/140‑1 (MQ=255)                                                                                                             gTGCGGATCGGCTCGAAGCTTTCGAAGATCGGCGCCCAGGCGGCTTCTTCCTGTTTGTCGTGGTCGACTGCGAAGCCGATGGTTGGGGTGTGGGAGACGGCCAGGCCACCAATGATACGAGCCATGCGAAAGTCCTCTGTTACAGGTTa                                      <  7:201735/149‑1 (MQ=255)                                                                                                                                    gAAGATCGGCGCCCAGGCGGCTTCTTCCTGTTTGTCGTGGTCGACTGCGAAGCCGATGGTTGGGGTGTGGGAGACGGCCAGGCCACCAATGa                                                                        >  7:89848/1‑92 (MQ=255)                                                                                                                                    gAAGATCGGCGCCCAGGCGGCTTCTTCCTGTTTGTCGTGGTCGACTGCGAAGCCGATGGTTGGGGTGTGGGAGACGGCCAGGCCACCAATGa                                                                        <  8:89848/92‑1 (MQ=255)                                                                                                                                            gcgcCCAGGCGGCTTCTTCCTGTTTGTCGTGGTCGACTGCGAAGCCGATGGTTGGGGTGTGGGAGACGGCCAGGCCACCAATGATACGAGCCATGCGAAAGTCCTCTGTTACAg                                          <  8:173694/114‑1 (MQ=255)                                                                                                                                                 cAGGCGGCTTCTTCCTGTTTGTCGTGGTCGACTGCGAAGCCGATGGTTGGGGTGTGGGAGACGGCCAGGCCACCAATGATACGAGCCATGCGAAAGTCCTCTGTTACAGGTTACGGCGCGGTTACTGCGGGGGTCGCGCGCAGCCGGGc  >  6:263561/1‑149 (MQ=255)                                                                                                                                                     |                                                                                                                                                 TGCTCGTCTACGCCCAGGGTGAAGGCGCTGTAATGGTCAAAGAAGAACGAGGTGATGTGGTCGTTGAAGATATAGAAGAGTACGTCCGGCTGGCGCTGCTGCAGCCACGTGCGGATCGGCTCGAAGCTTTCGAAGATCGGCGCCCAGGCGGCTTCTTCCTGTTTGTCGTGGTCGACTGCGAAGCCGATGGTTGGGGTGTGGGAGACGGCCAGGCCACCAATGATACGAGCCATGCGAAAGTCCTCTGTTACAGGTTACGGCGCGGTTACTGCGGGGGTCGCGCGCAGCCGGGC  >  NC_002947/2866544‑2866836

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.