New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3558296	26 (0.530)	4 (0.080)	4/256	NT	13.0%	coding (595/1422 nt)	PP_3142	sugar transferase
	?	NC_002947	= 3558333	28 (0.590)					coding (632/1422 nt)	PP_3142	sugar transferase

TCGGCAACGGTGACCTGGCCAACTTCCTCTATCAGAAAATCAGCAACAACCCGTGGTTTGGCGAGCGGGTGCTGGGGTGCGTGGTGCTTGACAAGGGCGATGAGCAAGGGCCGGAAAGTGCCGAAGGCAAGCAGCGCCTGCCGGTGCTGGGGCATATTGGCGACCTCGACGAGCTGGTGGCCCGGCATGGCATTCGTACGGTGTACCTGGTGACGCCGCTGGGGGGCTCCGAAGTCATCAACGATGTGTACTTCAAATTGCTCGACAAGTGCATTGCGGTCAATTGGGTGCCCG  >  NC_002947/3558150‑3558443                                                                                                                                                   |                                                                                                                                                    tcGGCAACGGTGACCTGGCCAACTTCCTCTATCAGAAAATCAGCAACAACCCGTGGTTTGGCGAGCGGGTGCTGGGGTGCGTGGTGCTTGACAAGGGCGATGAGCAAGGGCCGGAAAGTGCCGAAGGCAAGCAGCGCCTGCCGGTGCTg                                                                                                                                                   >  7:263019/1‑149 (MQ=255)   ggCAACGGTGACCTGGCCAACTTCCTCTATCAGAAAATCAGCAACAACCCGTGGGTTGGCGAGCGGGTGCGGGGGGGCGTGGTGCGTGACAAGGGCGAGGAGCAAGGGCCGGAAAGTGCCGAAGGCAAGCAGCGCCTGCCGGTGCTggg                                                                                                                                                 <  7:99150/149‑1 (MQ=255)    gCAACGGTGACCTGGCCAACTTCCTCTATCAGAAAATCAGCAACAACCCGTGGTTTGGCGAGCGGGTGCTGGGGTGCGTTGTGCTTGACAAGGGCGATGAGCAAGGGCCGGAAAGTTCCGAAGGCAAGCAGCACCGGCAGGCGCTgctt                                                                                                                                                <  4:275169/149‑4 (MQ=255)     cAACGGTGACCTGGCCAACTTCCTCTATCAGAAAATCAGCAACAACCCGTGGTTTGGCGAGCGGGTGCTGGGGTGCGTGGTGCTTGACAAGGGCGATGAGCAAGGGCCGGAAAGTGCCGAAGGCAAGCAGCGCCTGCCGGTGCTGGGGc                                                                                                                                               <  3:1077/149‑1 (MQ=255)                    cAACTTCCTCTATCAGAAAATCAGCAACAACCCGTGGTTGGGCGAGCGGGTGCTGGGGTGCGTGGTGCTTGACAAGGGCGATGAGCAAGGGCCGGAAAGTGCCGAAGGCAAGCAGCGCCTGCCGGTGCTGGGGCATATTGGCGACCTcg                                                                                                                                <  8:263019/149‑1 (MQ=255)                                tCAGAAAATCAGCAACAACCCGTGGTTTGGCGAGCGGGTGCTGGGGTGCGTGGTGCTTGACAAGGGCGATGAGCAAGGGCCGGAAAGTGCCGAAGGCAAGCAGCGCCTGCCGGTGCTGGGGCATATTGGCGACCTCGACGAGCtggtgg                                                                                                                    >  6:204898/1‑149 (MQ=255)                                 cAGAAAATCAGCAACAACCCGTGGTTTGGCGAGCGGGTGCTGGGGTGCGTGGTGCTTGACAAGGGCGATGAGCAAGGGCCGGAAAGTGCCGAAGGCAAGCAGCGCCTGCCGGTGCcgggccaccagctcgtcgaggtcgccaatatgcc                                                                                                                   >  2:140549‑M1/1‑115 (MQ=255)                                      aaTCAGCAACAACCCGTGGTTTGGCGAGCGGGTGCTGGGGTGCGTGGTGCTTGACAAGGGCGATGAGCAAGGGCCGGAAAGTGCCGAAGGCAAGCAGCGCCTGCCGGTGCcgggccaccagctcgtcgaggtcgccaatatgccccag                                                                                                               >  4:138624‑M1/1‑110 (MQ=255)                                        tCAGCAACAACCCGTGGTTTGGCGAGCGGGTGCTGGGGTGCGTGGTGCTTGACAAGGGCGATGAGCAAGGGCCGGAAAGTGCCGAAGGCAAGCAGCGCCTGCCGGTGCcgggccaccagctcgtcgaggtcgccaatatgccccagcac                                                                                                            <  3:138624‑M1/149‑42 (MQ=255)                                           gCAACAACCCGTGGTTTGGCGAGCGGGTGCTGGGGTGCGTTGTGCTTGACAAGGGCGATGAGCAAGGGCCGGAAAGTGCCGAAGGCAAGCAGCGCCTGCCGGTGCcgggccaccagctcgtcgaggtcgccaatatgccccagcaccgg                                                                                                         <  1:140549‑M1/149‑45 (MQ=255)                                           gCAACAACCCGTGGTTTGGCGAGCGGGTGCTGGGGTGCGTGGTGCTTGACAAGGGCGATGAGCAAGGGCCGGAAAGTGCCGAAGGCAAGCAGCGCCTGCCGGTGCTGGGGCATATTGGCGACCTCGACGAGCTGGTGGCCCggcatgg                                                                                                          >  6:73404/1‑148 (MQ=255)                                            caacaaCCCGTGGTTTGGCGAGCGGGTGCTGGGGTGCGTGGTGCTTGACAAGGGCGATGAGCAAGGGCCGGAAAGTGCCGAAGGCAAGCAGCGCCTGCCGGTGCTGGGGCATATTGGCGACCTcgacg                                                                                                                             <  6:301521/128‑1 (MQ=255)                                            caacaaCCCGTGGTTTGGCGAGCGGGTGCTGGGGTGCGTGGTGCTTGACAAGGGCGATGAGCAAGGGCCGGAAAGTGCCGAAGGCAAGCAGCGCCTGCCGGTGCTGGGGCATATTGGCGACCTcgacg                                                                                                                             >  5:301521/1‑128 (MQ=255)                                             aacaacCCGTGGTTTGGCGAGCGGGTGCTGGGGTGCGTGGTGCTTGACAAGGGCGATGAGCAAGGGCCGGAAAGTGCCGAAGGCAAGCAGCGCCTGCCGGTGCTGGGGCATATTGGCGACCTCGACGAGCTGGTGGCCCggcatggcat                                                                                                       >  6:138541/1‑149 (MQ=255)                                                   ccGTGGTTTGGCGAGCGGGTGCTGGGGTGCGTGGTGCTTGACAAGGGCGATGAGCAAGGGCCGGAAAGTGCCGAAGGCAAGCAGCGCCTGCCGGTGCTGGGGCATATTGGCGACCTCGACGAGCTGGTGGCCCGGCATGGCATTCGTAc                                                                                                 >  7:59968/1‑149 (MQ=255)                                                                      tGCTGGGGTGCGTGGTGCTTGACAAGGGCGATGAGCAAGGGCCGGAAAGTGCCGAAGGCAAGCAGCGCCTGCCGGTGCTGGGGCATATTGGCGACCTCGACGAGCTGGTGGCCCGGCATGGCATTCGTACGGTGTACCTGGTGAcgccg                                                                              >  3:114559/1‑149 (MQ=255)                                                                        cTGGGGTGCGTGGTGCTTGACAAGGGCGATGAGCAAGGGCCGGAAAGTGCCGAAGGCAAGCAGCGCCTGCCGGTGCTGGGGCATATTGGCGACCTCGACGAGCTGGTGGCCCGGCATGGCATTCGTACGGTGTACCTGGTGACGCCGCt                                                                            <  5:138541/149‑1 (MQ=255)                                                                          ggggTGCGTGGTGCTTGACAAGGGCGATGAGCAAGGGCCGGAAAGTGCCGAAGGCAAGCAGCGCCTGCCGGTGCTGGGGCATATTGGCGACCTCGACGAGCTGGTGGCCCGGCATGGCATTCGTACGGTGTACCTGGTGACGCCGCTgg                                                                          >  6:311974/1‑149 (MQ=255)                                                                                   ggtgCTTGACAAGGGCGATGAGCAAGGGCCGGAAAGTGCCGAAGGCAAGCAGCGCCTGCCGGTGCTGGGGCATATTGGCGACCTCGACGAGCTGGTGGCCCGGCATGGCATTCGTACGGTGTACCTGGTGACGCCGCTGGGGGGCTcc                                                                  >  6:120700/1‑148 (MQ=255)                                                                                                   gATGAGCAAGGGCCGGAAAGTGCCGAAGGCAAGCAGCGGCTGCCGGTGCTGGGGCATATTGGCGACCTCGACGAGCTGGTGGCCCGGCATGGCATTCGTACGGTGTACCTGGTGACGCCGGTGGGGGGCTCCGAAGTCATCAACGAtgt                                                 <  8:59968/149‑1 (MQ=255)                                                                                                      gAGCAAGGGCCGGAAAGTGCCGAAGGCAAGCAGCGCCTGCCGGTGCTGGGGCATATTGGCGACCTCGACGAGCTGGTGGCCCGGCATGGCATTCGt                                                                                                   >  2:24812/1‑96 (MQ=255)                                                                                                      gAGCAAGGGCCGGAAAGTGCCGAAGGCAAGCAGCGCCTGCCGGTGCTGGGGCATATTGGCGACCTCGACGAGCTGGTGGCCCGGCATGGCATTCGt                                                                                                   <  1:24812/96‑1 (MQ=255)                                                                                                        gCAAGGGCCGGAAAGTGCCGAAGGCAAGCAGCGCCTGCCGGTGCTGGGGCATATTGGCGACCTCGACGAGCTGGTGGCCCGGCATGGCATTCGTAAGGTGTACCTGGTGACGCCGCTGGGGGGCTCCGAAGTCATCAACGATGTGTACt                                            >  8:208624/1‑149 (MQ=255)                                                                                                        gCAAGGGCCGGAAAGTGCCGAAGGCAAGCAGCGCCTGCCGGTGCTGGGGCATATTGCCGACCTCGACGAGCTGGTGGCCCGGCATGGCATTCGTACGGTGTACCTGGTGACGCCGCTGGGGGGCTCCGAAGTCATCAACGATGTGTAc                                             >  2:274917/1‑148 (MQ=255)                                                                                                          aaGGGCCGGAAAGTGCCGAAGGCAAGCAGCGCCTGCCGGTGCTGGGGCATATTGGCGACCTCGACGAGCTGGTGGCCCGGCATGGCATTCGTACGGTGTACCTGGTGACGCCGCTGGGGGGCTCCGAAGTCATCAACGATGTGTACTTc                                          <  5:73404/149‑1 (MQ=255)                                                                                                                 ggAAAGTGCCGAAGGCAAGCAGCGCCTGCCGGTGCTGGGGCATATTGGCGACCTCGACGAGCTGGTGGCCCGGCATGGCATTCGTACGGTGTACCTGGTGACGCCGCTGGGGGGCTCCGAAGTCATCAACGATGTGTACTTCAAATTGc                                   <  5:204898/149‑1 (MQ=255)                                                                                                                 ggAAAGTGCCGAAGGCAAGCAGCGCCTGCCGGTGCTGGGGCATATTGGCGACCTCGACGAGCTGGTGGCCCGGCATGGCATTCGTACGGTGTACCTGGTGACGCCGCTGGGGGGCTCCGAAGTCATCAACGATGTGTACTTCAAATTGc                                   <  5:311974/149‑1 (MQ=255)                                                                                                                           gatggCAAGCAGCGCCTGCCGGGGCGGGGGCATATTGGCCACCTCGACGTGCTGGTGGCCCGGCATGGCATTCGTACGGTGAACCTGGGGACGCCGCTGGGGGGCTCCGAAGTCATCAACGATGTGTACTTCAAATTGCTCGACAAGTg                         <  2:216923/146‑1 (MQ=255)                                                                                                                             aGGCAAGCAGCGCCTGCCGGTGCTGGGGCATATTGGCGACCTCGACGAGCTGGTGGCCCGGCATGGCATTCGTACGGTGTACCTGGTGACGCCGCTGGGGGGCTCCGAAGTCATCAACGATGTGTACTTCAAATTGCTCGACAAGTGCa                       >  4:148102/1‑149 (MQ=255)                                                                                                                               gCAAGCAGCGCCTGCCGGTGCTGGGGCATATTGGCGACCTCGACGAGCTGGTGGCCCGGCATGGCATTCGTACGGTGTACCTGGTGACGCCGCTGGGGGGCTCCGAAGTCATCAACGATGTGTACTTCAAATTGCTCGACAAGTGCAtt                     <  7:208624/149‑1 (MQ=255)                                                                                                                                cAAGCAGCGCCTGCCGGTGCTGGGGCATATTGGCGACCTCGACGAGCTGGTGGCCCGGCATGGCATTCGTACGGTGTACCTGGTGACGCCGCTGGGGGGCTCCGAAGTCATCAACGATGTGTACTTCAAATTGCTCGACAAGTGCATTg                    <  5:120700/149‑1 (MQ=255)                                                                                                                                cAAGCAGCGCCTGCCGGTGCTGGGGCATATTGGCGACCTCGACGAGCTGGTGGCCCGGCATGGCATTCGTACGGTGTACCTGGTGACGCCGCTGGGGGGCTCCGAAGTCATCAACGATGTGTACTTCAAATTGCTCGACAAGTGCATTg                    <  4:114559/149‑1 (MQ=255)                                                                                                                                          cTGCCGGTGCTGGGTCATATTGGCGACCTCGACGAGCTGGTGGCCCGGCATGGCATTCGTACGGTGTACCTGGTGACGCCGCTGGGGGGCTCCGAAGTCATCAACGATGTGTACTTCAAATTGCTCGACAAGTGCATTGCGGTCAATTg          <  1:274917/149‑1 (MQ=255)                                                                                                                                             ccGGTGCTGGGGCATATTGGCGACCTCGACGAGCTGGTGGCCCGgcaccggcaggcgctgcttgccttcggcactttccggcccttgctcatcgcccttgtcaagcacaacgcaccccagcacccgctcgccaaaccacgggttgttgc       <  1:140549‑M2/149‑106 (MQ=255)                                                                                                                                                gTGCTGGGGCATATTGGCGACCTCGACGAGCTGGTGGCCCGgcaccggcaggcgctgcttgccttcggcactttccggcccttgctcatcgcccttgtcaagcaccacgcaccccagcacccgctcgccaaaccacgggttgttgctga    <  3:138624‑M2/149‑109 (MQ=255)                                                                                                                                                   cTGGGGCATATTGGCGACCTCGACGAGCTGGTGGCCCGgcaccggcaggcgctgcttgccttcggcactttccggcccttgctcatcgcccttgtcaagcaccacgcaccccagcacccgctcgccaaaccacgggttgttgctgatt  >  4:138624‑M2/1‑38 (MQ=255)                                                                                                                                                   |                                                                                                                                                    TCGGCAACGGTGACCTGGCCAACTTCCTCTATCAGAAAATCAGCAACAACCCGTGGTTTGGCGAGCGGGTGCTGGGGTGCGTGGTGCTTGACAAGGGCGATGAGCAAGGGCCGGAAAGTGCCGAAGGCAAGCAGCGCCTGCCGGTGCTGGGGCATATTGGCGACCTCGACGAGCTGGTGGCCCGGCATGGCATTCGTACGGTGTACCTGGTGACGCCGCTGGGGGGCTCCGAAGTCATCAACGATGTGTACTTCAAATTGCTCGACAAGTGCATTGCGGTCAATTGGGTGCCCG  >  NC_002947/3558150‑3558443

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.