| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3668197 = | 22 (0.450) | 3 (0.060) | 3/248 | NT | 11.8% | coding (490/1368 nt) | PP_3231 | hypothetical protein |
| ? | NC_002947 | 3668239 = | 24 (0.520) | coding (448/1368 nt) | PP_3231 | hypothetical protein | |||||
TGCTCGCATGGCATGACGCCACTGTGCTCGACAAAGTGCCCGTACAGCGCGGGGTCGTCCTGCCAAGGCGTCAGGCAACCGTAGCGGCGACGGGCTTCATGGGCCAGATGCGGGTCGACCCGGTCCAGATACGCCAGGACTTCATGGATGGAATTGCGCAGGCTGTACACATCCAGGCCGCGGAATTCCACGCGGTGGTCGGTGGGCAGCAGGCGGTTGTGCCCGTGCAGCCATTGGGCGAAGGCTTTGACTTCGCTATTGCGCCACATCCAGGTTGGAAAACGGCTG > NC_002947/3668049‑3668336 | gatcagtacgtccgaggcttggcgcactcggcgtggaaacgccatattttcagccgttttccaacctggatgtggcgcaatagcgaagtcaaagccttcgcccaatggctgcacgggcacaaccgcctgctgcccaccgaccaccgcgt < 1:21184‑M1/1‑1 (MQ=255)gatcagtacgtccgaggcttggcgcactcggcgtggaaacgccatattttcagccgttttccaacctggatgtggcgcaatagcgaagtcaaagccttcgcccaatggctgcacgggcacaaccgcctgctgcccaccgaccaccgcgt > 2:97667‑M1/149‑149 (MQ=255)gatcagtacgtccgaggcttggcgcactcggcgtggaaacgccatattttcagccgttttccaacctggatgtggcgcaatagcgaagtcaaagccttcgcccaatggctgcacgggcacaaccgcctgctgcccaccgaccaccgcgt > 2:48446‑M1/149‑149 (MQ=255) gCTCGCATGGCATGACGCCACTGTGCTCGACAAAGTGCCCGTACAGCGCGGGGTCGTCCTGCCAAGGCGTCAGGCAACCGTAGCGGCGACGGGCTTCATGGGCCAGATGCGGGTCGACCCGGTCCAGATACGCCAGGACTTCatggatg > 7:218285/1‑149 (MQ=255) tCGCATGGCATGACGCCACTGTGCTCGACAAAGTGCCCGTACAGCGCGGGGTCGTCCTGCCAAGGCGTCAGGCAACCGTAGCGGCGACGGGCTTCATGGGCCAGATGCGGGTCGACCCGGTCCAGATACGCCAGGACTTCatggatgg > 8:110424/1‑148 (MQ=255) tCGCATGGCATGACGCCACTGTGCTCGACAAAGTGCCCGTACAGCGCGGGGTCGTCCTGCCAAGGCGTCAGGCAACCGTAGCGGCGACGGGCTTCATGGGCCAGATGCGGGTCGACCCGGTCCAGATACGCCAGGACTTCatggatgg > 7:102124/1‑148 (MQ=255) tCGCATGGCATGACGCCACTGTGCTCGACAAAGTGCCCGTACAGCGCGGGGTCGTCCTGCCAAGGCGTCAGGCAACCGTAGCGGCGACGGGCTTCATGGGCCAGATGCGGGTCGACCCGGTCCAGATACGCCAGGACTTCatggatgg > 6:89548/1‑148 (MQ=255) gtacgtccgaggcttggcgcactcggcgtgtgaaacgccatattttcagccgttttccaacctggatgtggcgcaatagcgaagtcaaagccttcgcccaatggctgcacgggcacaaccgcctgctgcccaccgaccaccgcgTGGaa < 1:27360‑M1/5‑1 (MQ=255) atggcatgACGCCACTGTGCTCGACAAAGTGCCCGTACAGCGCGGGGTCGTCCTGCCAAGGCGTCAGGCAACCGTAGCGGCGACGGGCTTCATGGGCCAGATGCGGGTCGACCCGGTCCAGATACGCCAGGACTTCATGGATGGAATTg > 8:52327/1‑149 (MQ=255) gCCACTGTGCTCGACAAAGTGCCCGTACAGCGCGGGGTCGTCCTGCCAAGGCGTCAGGCAACCGTAGCGGCGACGGGCTTCATGGGCCAGATGCGGGTCGACCCGGTCCAGATACGCCAGGACTTCATGGATGGAATTGCGCAGGCTg > 3:72984/1‑148 (MQ=255) aCAAAGTGCCCGTACAGCGCGGGGTCGTCCTGCCAAGGCGTCAGGCAACCGTAGCGGCGACGGGCTTCATGGGCCAGATGCGGGTCGACCCGGTCCAGATACGCCAGGACTTCATGGATGGAATTGCGCAGGCTGTACACATCCAGGcc > 1:149583/1‑149 (MQ=255) ccGTACAGCGCGGGGTCGTCCTGCCAAGGCGTCAGGCAACCGTAGCGGCGACGGGCTTCATGGGCCAGATGCGGGTCGACCCGGTCCAGATACGCCAGGACTTCATGGATGGAATTGCGCAGGCTGTACACATCCAGGCCGCGGAATTc < 8:218285/149‑1 (MQ=255) catattttcagccgttttccaacctggatgtggcgcaatagcgaagtcaaagccttcgcccaatggctgcacgggcacaaccgcctgctgcccaccgaccaccgcgTGGAATTGCGCAGGCTGTACACATCCAGGCCGCGGAATTCCAc > 3:73350‑M1/107‑149 (MQ=255) tattttcagccgttttccaacctggatgtggcgcaatagcgaagtcaaagccttcgcccaatggctgcacgggcacaaccgcctgctgcccaccgaccaccgcgTGGAATTGCGCAGGCTGTACACATCCAGGCCGCGGAATTCCAcg < 1:304764‑M1/44‑1 (MQ=255) tattttcagccgttttccaacctggatgtggcgcaatagcgaagtcaaagccttcgcccaatggctgcacgggcacaaccgcctgctgcccaccgaccaccgcgTGGAATTGCGCAGGCTGTACACATCCAGGCCGCGGAATTCCAcg > 2:304764‑M1/105‑148 (MQ=255) cAGCGCGGGGTCGTCCTGCCAAGGCGTCAGGCAACCGTAGCGGCGACGGGCTTCATGGGCCAGATGCGGGTCGACCCGGTCCAGATACGCCAGGACTTCATGGATGGAATTGCGCAGGCTGTACACATCCAGGCCGCGGAATTCCAcg < 7:110424/148‑1 (MQ=255) ggggTCGTCCTGCCAAGGCGTCAGGCAACCGTAGCGGCGACGGGCTTCATGGGCCAGATGCGGGTCGACCCGGTCCAGATACGCCAGGACTTCATGGATGGAATTGCGCAGGCTGTACACATCCAGGCCGCGGAATTCCACGCggtggt < 4:72984/149‑1 (MQ=255) ggTCGTCCTGCCAAGGCGTCAGGCAACCGTAGCGGCGACGGGCTTCATGGGCCAGATGCGGGTCGACCCGGTCCAGATACGCCAGGACTTCATGGATGGAATTGCGCAGGCTGTACACATCCAGGCCGCGGAATTCCACGCGGTGGTCg < 8:77864/149‑1 (MQ=255) gtcgtcCTGCCAAGGCGTCAGGCAACCGTAGCGGCGACGGGCTTCATGGGCCAGATGCGGGTCGACCCGGTCCAGATACGCCAGGACTTCATGGATGGAATTGCGCAGGCTGTACACATCCAGGCCGCGGAATTCCACGCGGTGGTCgg < 2:149583/149‑1 (MQ=255) cTGCCAAGGCGTCAGGCAACCGTAGCGGCGACGGGCTTCATGGGCCAGATGCGGGTCGACCCGGTCCAGATACGCCAGGACTTCATGGATGGAATTGCGCAGGCTGTACACATCCa > 7:174219/1‑116 (MQ=255) cTGCCAAGGCGTCAGGCAACCGTAGCGGCGACGGGCTTCATGGGCCAGATGCGGGTCGACCCGGTCCAGATACGCCAGGACTTCATGGATGGAATTGCGCAGGCTGTACACATCCa < 8:174219/116‑1 (MQ=255) gCCAAGGCGTCAGGCAACCGTAGCGGCGACGGGCTTCATGGGCCAGATGCGGGTCGACCCGGTCCAGATACGCCAGGACTTCATGGATGGAATTGCGCAGGCTGTACACATCCAGGCCGCGGAATTCCACGCGGTGGTCGGTGGgcag > 6:265214/1‑148 (MQ=255) gCGTCAGGCAACCGTAGCGGCGACGGGCTTCATGGGCCAGATGCGGGTCGACCCGGTCCAGATACGCCAGGACTTCATGGATGGAATTGCGCAGGCTGTACACATCCAGGCCGCGGAATTCCACGCGGTGGTCGGTGGGCAGCAGGCgg < 5:265214/149‑1 (MQ=255) cAACCGTAGCGGCGACGGGCTTCATGGGCCAGATGCGGGTCGACCCGGTCCAGATACGCCAGGACTTCATGGATGGAATTGCGCAGGCTGTACACATCCAGGCCGCGGAATTCCACGCGGTGGTCGGTGGGCAGCAGGCGGTTGTGccc < 7:52327/149‑1 (MQ=255) cGTAGCGGCGACGGGCTTCATGGGCCAGATGCGGGTCGACCCGGTCCAGATACGCCAGGACTTCATGGATGGAATTGCGCAGGCTGTACACATCCAGGACGCGGAATTCCACGCGGTGGTCGGTGGGCAGCAGGCGGTTGTGCCCGTGc > 7:70945/1‑149 (MQ=255) cggcgACGGGCTTCATGGGCCAGATGCGGGTCGACCCGGTCCAGATACGCCAGGACTTCATGGATGGAATTGCGCAGGCTGTACACATCCAGGCCGCGGAATTCCACGCGGTGGTCGGTGGGCAGCAGGCGGTTGTGCCCGTGCAGCCa > 6:96420/1‑149 (MQ=255) ggCTTCATGGGCCAGATGCGGGTCGACCCGGTCCAGATACGCCAGGACTTCATGGATGGAATTGCGCAGGCTGTACACATCCAGGCCGCGGAATTCCACGCGGTGGTCGGTGGGCAGCAGGCGGTTGTGCCCGTGCAGCCATTGGGCGa < 5:96420/149‑1 (MQ=255) gggCCAGATGCGGGTCGACCCGGTCCAGATACGCCAGGACTTCATGGATGGAATTGCGCAGGCTGTACACATCCAGGCCGCGGAATTCCACGCGGTGGTCGGTGGGCAGCAGGCGGTTGTGCCCGTGCAGCCATTGGGCGAAGGCttt > 6:268414/1‑148 (MQ=255) gACCCGGTCCAGATACGCCAGGACTTCATGGATGGAATTGCGCAGGCTGTACACATCCAGGCCGCGGAATTCCACGCGGTGGTCGGTGGGCAGCAGGCGGTTGTGCCCGTGCAGCCATTGGGCGAAGGCTTTGACTTCGCTATTgcgc > 4:165663/1‑148 (MQ=255) aTACGCAAGGACTTCATGGATGGAATTGCGCAGGCTGTACACATCCAGGCCGCGGAATTCCACGCGGTGGTCGGTGGGCAGCAGGCGGTTGTGCCCGTGCAGCCATTGGGCGAAGGCTTTGACTTCGCTATTGCGCCACATCCAGGTTg < 8:102124/149‑1 (MQ=255) ccAGGACTTCATGGATGGAATTGCGCAGGCTGTACACATCCAGGCCGCGGAATTCCACGCGGTGGTCGGTGGGCAGCAGGCGGTTGTGCCCGTGCAGCCATTGGGCGAAGGCTTTGACTTCGCTATTGCGCCACATCCAGGTTGGaaaa > 2:27360/1‑149 (MQ=255) ccAGGACTTCATGGATGGAATTGCGCAGGCTGTACACATCCAGGCCGCGGAATTCCACGAGGTGGTCGGTGGGCAGCAGGCGGTTGTGCCCGTGCAGCCATTGGGCGAAGGCTTTGACTTCGCTATTGCGCCACATCCAGGTTGGaaaa > 2:285385/1‑149 (MQ=255) ttCATGGATGGAATTGCGCAGGCTGTACACATCCAGGCCGCGGAATTCCACGCGGTGGTCGGTGGGCAGCAGGCGGTTGTGCCCGTGCAGCCATTGGGCGAAGGCTTTGACTTCGCTATTGCGCCACATCCAGGTTGGAAAACGGCTg > 3:115939/1‑148 (MQ=255) | TGCTCGCATGGCATGACGCCACTGTGCTCGACAAAGTGCCCGTACAGCGCGGGGTCGTCCTGCCAAGGCGTCAGGCAACCGTAGCGGCGACGGGCTTCATGGGCCAGATGCGGGTCGACCCGGTCCAGATACGCCAGGACTTCATGGATGGAATTGCGCAGGCTGTACACATCCAGGCCGCGGAATTCCACGCGGTGGTCGGTGGGCAGCAGGCGGTTGTGCCCGTGCAGCCATTGGGCGAAGGCTTTGACTTCGCTATTGCGCCACATCCAGGTTGGAAAACGGCTG > NC_002947/3668049‑3668336 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |