New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3714765	48 (0.980)	4 (0.090)	4/252	NT	7.6%	coding (1091/1221 nt)	paaJ	3‑oxoadipyl‑CoA/3‑oxo‑5,6‑dehydrosuberyl‑CoA thiolase
	?	NC_002947	= 3714854	51 (1.080)					coding (1002/1221 nt)	paaJ	3‑oxoadipyl‑CoA/3‑oxo‑5,6‑dehydrosuberyl‑CoA thiolase

GCAGGGTCTGAACCGCTCAGAGGCGCTCGATGATCATGGCAATGCCTTGGCCTACGCCGATGCACATGGTGCACAGGGCGTAGCGGCCGGCCGTTTCTTCA‑AGCTCGTGCAAGGCAGTGGTCACCAACCGGGCACCGCTCATGCCCAGGGGATGGCCCAGGGCGATGGCGCCGCCGTTGCGGTTGACTCGCGGGTCGTCGTCGGCCAGGCCCAGCTCGCGCAACACGGCCAGCCCTTGGGCGGCAAAGGCCTCATTGAGTTCGATGACATCCAGGTCAGCCAGTGCCAGGCCGG  >  NC_002947/3714619‑3714912                                                                                                                                                    |                                                                                                                                                    gcAGGGTCTGAACCGCTCAGAGGCGCTCGATGATCATGGCAATGCCTTGGCCTACGCCGATGCACATGGTGCACAGGGCGTAGCGGCCGGCCGTTTCTTCA‑AGCTCGTGCAAGGCAGTGGTCACCAACCGGGCACCGCTCATGCCCAgg                                                                                                                                                   <  4:162899/149‑1 (MQ=255) gcAGGGTCTGAACCGCTCAGAGGCGCTCGATGATCATGGCAATGCCTTGGCCTACGCCGATGCACATGGTGCACAGGGCGTAGCGGCCGGCCGTTTCTTCA‑AGCTCGTGCAAGGCAGTGGTCACCAACCGGGCACCGCTCATGCCCAgg                                                                                                                                                   >  2:153178/1‑149 (MQ=255)             ccGCTCAGAGGCGCTCGATGATCATGGCAATGCCTTGGCCTACGCCGATGCACATGGTGCACAGGGCGTAGCGGCCGGCCGTTTCTTCA‑AGCTCGTGCAAGGCAGTGGTCACCAACCGGGCACCGCTCATGCCCAGGGGAt                                                                                                                                               >  2:266739/1‑141 (MQ=255)             ccGCTCAGAGGCGCTCGATGATCATGGCAATGCCTTGGCCTACGCCGATGCACATGGTGCACAGGGCGTAGCGGCCGGCCGTTTCTTCA‑AGCTCGTGCAAGGCAGTGGTCACCAACCGGGCACCGCTCATGCCCAGGGGAt                                                                                                                                               <  1:266739/141‑1 (MQ=255)             ccGCTCAGAGGCGCTCGATGATCATGGCAATGCCTTGGCCTACGCCGATGCACATGGTGCACAGGGCGTAGCGGCCGGCCGTTTCTTCA‑AGCTCGTGCAAGGCAGTGGTCACCAACCGGGCACCGCTCATGCCCAGGGGATGGCCCAgg                                                                                                                                       >  8:143588/1‑149 (MQ=255)              cGCTCAGAGGCGCTCGATGATCATGGCAATGCCTTGGCCTACGCCGATGCACATGGTGCACAGGGCGTAGCGGCCGGCCGTTTCTTCA‑AGCTCGTGCAAGGCAGTGGTCACCAACCGGGCACCGCTCATGCCCAGGGGATGGCCCAggg                                                                                                                                      <  5:217092/149‑1 (MQ=255)                        cgcTCGATGATCATGGCAATGCCTTGGCCTACGCCGATGCACATGGTGCACAGGGCGTAGCGGCCGGCCGTTTCTTCA‑AGCTCGTGCAAGGCAGTGGTCACCAACCGGGCACCGCTCATGCCCAGGGGATGGCCCAGGGCGATGGcgcc                                                                                                                            <  2:25733/149‑1 (MQ=255)                         gcTCGATGATCATGGCAATGCCTTGGCCTACGCCGATGCACATGGTGCACAGGGCGTAGCGGCCGGCCGTTTCTTCA‑AGCTCGTGCAAGGCAGTGGTCACCAACCGGGCACCGCTCATGCCCAGGGGATGGcc                                                                                                                                           >  5:132363/1‑133 (MQ=255)                         gcTCGATGATCATGGCAATGCCTTGGCCTACGCCGATGCACATGGTGCACAGGGCGTAGCGGCCGGCCGTTTCTTCA‑AGCTCGTGCAAGGCAGTGGTCACCAACCGGGCACCGCTCATGCCCAGGGGATGGcc                                                                                                                                           <  6:132363/133‑1 (MQ=255)                             gatgatCATGGCAATGCCTTGGCCTACGCCGATGCACATGGTGCACAGGGCGTAGCGGCCGGCCGTTTCTTCA‑AGCTCGTGCAAGGCAGTGGTCACCAACCGGGCAACCCTCATGCCCAGGGGATGGCCCAGGGCGATGGCGCCGCCGt                                                                                                                       >  4:26391/1‑149 (MQ=255)                                   cATGGCAATGCCTTGGCCTACGCCGATGGACATGGTGCACAGGCCGTAGCGGCCGGACGTTACTTAA‑AGCTCGTGCAAGGCAGTGGTCACAAACCGGGCACCGCTCATGCCCAGGGGATGGCCCAGGGCGATGGCGCCGCCGTTGCGGt                                                                                                                 >  6:18157/1‑149 (MQ=255)                                    aTGGCAATGCCTTGGCCTACGCCGATGCACATGGTGCACAGGGCGTAGCGGCCGGCCGTTTCTTCA‑AGCTCGTGCAAGGCAGTGGTCACCAACCGGGCACCGCTCATGCCCAGGGGATGGCCCAGGGCGATGGCGCCGCCGTTGCGGt                                                                                                                 <  4:269408/148‑1 (MQ=255)                                    aTGGCAATGCCTTGGCCTACGCCGATGCACATGGTGCACAGGGCGTAGCGGCCGGCCGTTTCTTCA‑AGCTCGTGCAAGGCAGTGGTCACCAACCGGGCACCGCTCATGCCCAGGGGATGGCCCAGGGCGATGGCGCCGCCGTTGCGGt                                                                                                                 <  8:263868/148‑1 (MQ=255)                                     tGGCAATGCCTTGGCCTACGCCGATGCACATGGTGCACAGGGCGTAGCGGCCGGCCGTTTCTTCA‑AGCTCGTGCAAGGCAGTGGTCACCAACCGGGCACCGCTCATGCCCAGGGGATGGCCCAGGGCGATGGCGCCGCCGTTGCGGtt                                                                                                                >  7:187540/1‑148 (MQ=255)                                             ccTTGGCCTACGCCGATGCACATGGTGCACAGGGCGTAGCGGCCGGCCGTTTCTTCA‑AGCTCGTGCAAGGCAGTGGTCACCAACCGGGCACCGCTCATGCCCAGGGGATGGCCCAGGGCGATGGCGCCGCCGTTGCGGTTGACTCGCgg                                                                                                       >  6:16301/1‑149 (MQ=255)                                             ccTTGGCCTACGCCGATGCACATGGTGCACAGGGCGTAGCGGCCGGCCGTTTCTTCA‑AGCTCGTGCAAGGCAGTGGTCACCAACCGGGCACCGCTCATGCCCAGGGGATGGCCCAGGGCGATGGCGCCGCCGTTGCGGTTGACTCGCgg                                                                                                       <  8:79167/149‑1 (MQ=255)                                             ccTTGGCCTACGCAGATGCACATGGTGCACAGGGCGTAGCGGCCGGCCGTTTCTTCA‑AGCTCGTGCAAGGCAGTGGTCACCAACCGGGCACCGCTCATGCCCAGGGGATGGCCCAGGGCGATGGCGCCGCCGTTGCGGTTGACTCGCgg                                                                                                       >  7:79167/1‑149 (MQ=255)                                                    cTACGCCGATGCACATGGTGCACAGGGCGTAGCGGCCGGCCGTTTCTTCA‑AGCTCGTGCAAGGCAGTGGTCACCAACCGGGCACCGCTCATGCCCAGGGGATGGCCCAGGGCGATGGCGCCGCCGTTGCGGTTGACTCGCGGgtcgtcg                                                                                                >  4:24917/1‑149 (MQ=255)                                                          cGATGCACATGGTGCACAGGGCGTAGCGGCCGGCCGTTTCTTCAGAGCTCGTGCAAGGCAGTGGTCACCAACCGGGCACCGCTCATGCCCAGGGGATGGCCCAGGGCGATGGCGCCGCCGTTGCGGTTGACTCGCGGGTCGTCGTCgg                                                                                            >  1:63198/1‑148 (MQ=255)                                                          cGATGCACATGGTGCACAGGGCGTAGCGGCCGGCCGTTTCTTCA‑AGCTCGTGCAAGGCAGTGGTCACCAACCGGGCACCGCTCATGCCCAGGGGATGGCCCAGGGCGATGGCGCCGCCGTTGCGGTTGACTCGCGGGTCGTCGTCgg                                                                                            <  2:63198/147‑1 (MQ=255)                                                          cGATGCACATGGTGCACAGGGCGTAGCGGCCGGCCGTTTCTTCA‑AGCTCGTGCAAGGCAGTGGTCACCAACCGGGCACCGCTCATGCCCAGGGGATGGCCCAGGGCGATGGCGCCGCCGTTGCGGTTGACTCGCGGGTCGTCGTCGGcc                                                                                          <  1:99868/149‑1 (MQ=255)                                                          cGATGCACATGGAGCACAGGGCGTAGCGGCCGGCCGTTTCTTCA‑AGCTCGTGCAAGGCAGTGGTCACCAACCGGGCACCGCTCATGCCCAGGGGATGGCCCAGGGCGATGGCGCCGCCGTTGCGGTTGACTCGCGGGTCGTCGTCGGcc                                                                                          <  7:285313/149‑1 (MQ=255)                                                                acaTGGTGCACAGGGCGTAGCGGCCGGCCGTTTCTTCA‑AGCTCGTGCAAGGCAGTGGTCACCAACCGGGCACCGCTCATGCCCAagggctggccgtgttgcgcgagctgggcctggccgacgacgacccgcgagtcaaccgcaacggcg                                                                                    >  1:140615‑M1/1‑84 (MQ=255)                                                                acaTGGTGCACAGGGCGTAGCGGCCGGCCGTTTCTTCA‑AGCTCGTGCAAGGCAGTGGTCACCAACCGGGCACCGCTCATGCCCAGGGGATGGCCCAGGGCGATGGCGCCGCCGTTGCGGTTGACTCGCGGGTCGTCGTCGGCCAGGcc                                                                                     >  2:68094/1‑148 (MQ=255)                                                                 caTGGTGCACAGGGCGTAGCGGCCGGCCGTTTCTTCA‑AGCTCGTGCAAGGCAGTGGTCACCAACCGGGCACCGCTCATGCCCAGGGGATGGCCCAGGGCGATGGCGCCGCCGTTGCGGTTGACTCGCGGGTCGTCGTCGGCCAGGcc                                                                                     >  2:256193/1‑147 (MQ=255)                                                                  aTGGTGCACAGGGCGTAGCGGCCGGCCGTTTCTTCA‑AGCTCGTGCAAGGCAGTGGTCACCAACCGGGCACCGCTCATGCCCAGGGGATGGCCCAGGGCGATGGCGCCGCCGTTGCGGTTGACTCGCGGGTCGTCGTCGGCCAGGCCCAg                                                                                  >  3:252249/1‑149 (MQ=255)                                                                      tGCACAGGGCGTAGCGGCCGGCCGTTTCTTCA‑AGCTCGTGCAAGGCAGTGGTCACCAACCGGGCACCGCTCATGCCCAGGGGATGGCCCAGGGCGATGGCGCCGCCGTTGCGGTTGACTCGCGGGTCGTCGTCGGCCAGGCCCAGCTcg                                                                              >  3:149371/1‑149 (MQ=255)                                                                       gCACAGGGCGTAGCGGCCGGCCGTTTCTTCA‑AGCTCGTGCAAGGCAGTGGTCACCAACCGGGCACCGCTCATGCCCAGGGGATGGCCCAGGGCGATGGCGCCGCCGTTGCGGTTGACTCGCGGGTCGTCGTCGGCCAGGCCCAGCTcgc                                                                             <  8:187540/149‑1 (MQ=255)                                                                        catcgggCGTAGCGGCCGGCCGTTTCTTCA‑AGCTCGTGCAAGGCAGTGGTCACCAACCGGGCACCGCTCATGCCCAGGGGATGGCCCAGGGCGATGGCGCCGCCGTTGCGGTTGACTCGCGGGTCGTCGTCGGCCAGGCCCAGCTcgc                                                                             <  6:30071/144‑1 (MQ=255)                                                                        cacaGGGCGTAGCGGCCGGCCGTTTCTTCA‑AGCTCGTGCAAGGCAGTGGTCACCAACCGGGCACCGCTCATGCCCAGGGGATGGCCCAGGGCGATGGCGCCGCCGTTGCGGTTGACTCGCGGGTCGTCGTCGGCCAGGCCCAGCTcgcg                                                                            >  2:50690/1‑149 (MQ=255)                                                                        cacaGGGCGTAGCGGCCGGCCGTTTCTTCA‑AGCTCGTGCAAGGCAGTGGTCACCAACCGGGCACCGCTCATGCCCAGGGGATGGCCCAGGGCGATGGCGCCGCCGTTGCGGTTGACTCGCGGGTCGTCGTCGGCCAGGCCCAGCTcgc                                                                             <  2:33139/148‑1 (MQ=255)                                                                                       ccggccgTTTCTTCA‑AGCTCGTGCAAGGCAGTGGTCACCAACCGGGCACCGCTCATGCCCAagggctggccgtgttgcgcgagctgggcctggccgacgacgacccgcgagtcaaccgcaacggcggcgccatcgccctgggccatccc                                                             <  2:140615‑M1/149‑89 (MQ=255)                                                                                        cggccgTTTCTTCA‑AGCTCGTGCAAGGCAGTGGTCACCAACCGGGCACCGCTCATGCCCAGGGGATGGCCCAGGGCGATGGCGCCGCCGTTGCGGTTGACTCGCGGGTCGTCGTCGGCCAGGCCCAGCTCGCGCAACACGGCCAGCCCt                                                            <  1:150608/149‑1 (MQ=255)                                                                                          gCCGTTTCTTCA‑AGCTCGTGCAAGGCAGTGGTCACCAACCGGGCACCGCTCATGCCCAGGGGATGGCCCAGGGCGATGGCGCCGCCGTTGCGGTTGACTCGCGGGTCGTCGTCGGCCAGGCCCAGCTCGCGCAACACGGCCAGCCCTtg                                                          >  1:50690‑M2/1‑147 (MQ=255)                                                                                           ccGTTTCTTCA‑AGCTCGTGCAAGGCAGTGGTCACCAACCGGGCACCGCTCATGCCCAGGGGATGGCCCAGGGCGATGGCGCCGCCGTTGCGGTTGACTCGCGGGTCGTCGTCGGCCAGGCCCAGCTCGCGCAACACGGCCAGCCCTtgg                                                         >  7:143588‑M2/1‑146 (MQ=255)                                                                                            cGTTTCTTCA‑AGCTCGTGCAAGGCAGTGGTCACCAACCGGGCACCGCTCATGCCCAGGGGATGGCCCAGGGCGATGGCGCCGCCGTTGCGGTTGACTCGCGGGTCGTCGTCGGCCAGGCCCAGCTCGCGCAACACGGCCAGCCCTtggg                                                        <  7:207666‑M2/149‑5 (MQ=255)                                                                                             gTTTCTTCA‑AGCTCGTGCAAGGCAGTGGTCACCAACCGGGCACCGCTCATGCCCAGGGGATGGCCCAGGGCGATGGCGCCGCCGTTGCGGTTGACTCGCGGGTCGTCGTCGGCCAGGCCCAGCTCGCGCAACACGGCCAGCCCTtgggc                                                       <  1:103441‑M2/149‑6 (MQ=255)                                                                                                 cttcA‑AGCTCGTGCAAGGCAGTGGTCACCAACCGGGCACCGCTCATGCCCAGGGGATGGCCCAGGGCGATGGAGCCGCCGTTGCGGTTGACTCGCGGGTCGTCGTCGGCCAGGCCCAGCTCGCGCAACACGGCCAGCCCTTGggcggc                                                    >  3:212287/1‑148 (MQ=255)                                                                                                  ttcA‑AGCTCGTGCAAGGCAGTGGTCACCAACCGGGCACCGCTCATGCCCAGGGGATGGCCCAGGGCGATGGCGCCGCCGTTGCGGTTGACTCGCGGGTCGTCGTCGGCCAGGCCCAGCTcgc                                                                             <  1:51725/122‑1 (MQ=255)                                                                                                  ttcA‑AGCTCGTGCAAGGCAGTGGTCACCAACCGGGCACCGCTCATGCCCAGGGGATGGCCCAGGGCGATGGCGCCGCCGTTGCGGTTGACTCGCGGGTCGTCGTCGGCCAGGCCCAGCTcgc                                                                             >  2:51725/1‑122 (MQ=255)                                                                                                     a‑aGCTCGTGCAAGGCAGTGGTCACCAACCGGGCACCGCTCATGCCCAGGGGATGGCCCAGGGCGATGGCGCCGCCGTTGCGGTTGACTCGCGGGTCGTCGTCGGCCAGGCCCAGCTCGCGCAACACGGCCAGCCCTTGGGCGGCAAAgg                                               >  2:31818/1‑149 (MQ=255)                                                                                                     a‑aGCTCGTGCAAGGCAGTGGTCACCAACCGGGCACCGCTCATGCCCAGGGGATGGCCCAGGGCGATGGCGCCGCCGTTGCGGTTGACTCGCGGGTCGTCGTCGGCCAGGCCCAGCTCGCGCAACACGGCCAGCCCTTGGGCGGCAAAgg                                               >  3:296658/1‑149 (MQ=255)                                                                                                     a‑aGCTCGTGCAAGGCAGTGGTCACCAACCGGGCACCGCTCATGCCCAGGGGATGGCCCAGGGCGATGGCGCCGCCGTTGCGGTTGACTCGCGGGTCGTCGTCGGCCAGGCCCAGCTCGCGCAACACGGCCAGCCCTTGGGCGGCAAAgg                                               <  3:24917/149‑1 (MQ=255)                                                                                                       aGCTCGTGCAAGGCAGTGGTCACCAACCGGGCACCGCTCATGCCCAGGGGATGGCCCAGGGCGATGGCGCCGCCGTTGCGGTTGACTCGCGGGTCGTCGTCGGCCAGGCCCAGCTCGCGCAACACGGCCAGCCCTTGGGCGGCAAAGGc                                              <  4:212287/149‑1 (MQ=255)                                                                                                       aGCTCGTGCAAGGCAGTGGTCACCAACCGGGCACCGCTCATGCCCAGGGGATGGCCCAGGGCGATGGCGCCGCCGTTGCGGTTGACTCGCGGGTCGTCGTCGGCCAGGCCCAGCTCGCGCAACACGGCCAGCCCTTGGGCGGCAAAGGc                                              <  3:297113/149‑1 (MQ=255)                                                                                                          tCGTGCAAGGCAGTGGTCACCAACCGGGCACCGCTCATGCCCAagggctggccgtgttgcgcgagctgggcctggccgacgacgacccgcgagtcaaccgcaacggcggcgccatcgccctgggccatcccc                                                            <  8:235636‑M1/132‑90 (MQ=255)                                                                                                          tCGTGCAAGGCAGTGGTCACCAACCGGGCACCGCTCATGCCCAagggctggccgtgttgcgcgagctgggcctggccgacgacgacccgcgagtcaaccgcaacggcggcgccatcgccctgggccatcccc                                                            >  7:235636‑M1/1‑43 (MQ=255)                                                                                                            gTGCAAGGCAGTGGTCACCAACCGGGCACCGCTCATGCCCAGGGGATGGCCCAGGGCGATGGCGCCGCCGTTGCGGTTGACTCGCGGGTCGTCGTCGGCCAGGCCCAGCTCGCGCAACACGGCCAGCCCTTGGGCGGCAAAGGCCTCa                                          <  5:18157/148‑1 (MQ=255)                                                                                                             tGCAAGGCAGTGGTCACCAACCGGGCACCGCTCATGCCCAGGGGATGGCCCAGGGCGATGGCGCCGCCGTTGCGGTTGACTCGCGGGTCGTCGTCGGCCAGGCCCAGCTCGCGCAACACGGCCAGCCCTTGGGCGGCAAAGGCCTCAtt                                        <  1:31818/149‑1 (MQ=255)                                                                                                                      gTGGTCAGCAACCGGGCACCGGTCTTGCCCAGGGGATGGCCCAGGGCGATGGGGCGGCCGTTGCGGTTGACTCGAGGGTCGTCGTCGGCCAGGCCCAGCTCGCGCAACACGGCCAGCCCTTGGGCGGCAAAGGCCTCATTGAGTTCGAt                               <  3:26391/149‑1 (MQ=255)                                                                                                                      gTGGTCACCAACCGGGCACCGCTCATGCCCAGGGGATGGCCCAGGGCGATGGCGCCGCCGTTGCGGTTGACTCGCGGGTCGTCGTCGGCCAGGCCCAGCTCGCGCAACACGGCCAGCCCTTGGGCGGCAAAGGCCTCATTGAGTTCGAt                               <  1:68094/149‑1 (MQ=255)                                                                                                                       tGGTCACCAACCGGGCACCGCTCATGCCCAGGGGATGGCCCAGGGCGATGGCGCCGCCGTTGCGGTTGACTCGCGGGTCGTCGTCGGCCAGGCCCAGCTCGCGCAACACGGCCAGCCCTTGGGCGGCAAAGGCCTCATTGAGTTCGAt                               <  1:18271/148‑1 (MQ=255)                                                                                                                       tGGTCACCAACCGGGCACCGCTCATGCCCAGGGGATGGCCCAGGGCGATGGCGCCGCCGTTGCGGTTGACTCGCGGGTCGTCGTCGGCCAGGCCCAGCTCGCGCAACACGGCCAGCCCTTGGGCGGCAAAGGCCTCATTGAGTTCGAt                               >  2:18271/1‑148 (MQ=255)                                                                                                                       tGGTCACCAACCGGGCACCGCTCATGCCCAGGGGATGGCCCAGGGCGATGGCGCCGCCGTTGCGGTTGACTCGCGGGTCGTCGTCGGCCAGGCCCAGCTCGCGCAACACGGCCAGCCCTTGGGCGGCAAAGGCCTCATTGAGTTCGATg                              <  4:252249/149‑1 (MQ=255)                                                                                                                            aCCAACCGGGCACCGCTCATGCCCAGGGGATGGCCCAGGGCGATGGCGCCGCCGTTGCGGTTGACTCGCGGGTCGTCGTCGGCCAGGCCCAGCTCGCGCAACACGGCCAGCCCTTGGGCGGCAAAGGCCTCATTGAGTTCGATGACATc                         >  8:29293/1‑149 (MQ=255)                                                                                                                             ccAACCGGGCACCGCTCATGCCCAGGGGATGGCCCAGGGCGATGGCGCCGCCGTTGCGGTTGACTCGCGGGTCGTCGTCGGCCAGGCCCAGCTCGCGCAACACGGCCAGCCCTTGGGCGGCAAAGGCCTCATTGAGTTCGATGACATcc                        <  1:153178/149‑1 (MQ=255)                                                                                                                              cAACCGGGCACCGCTCATGCCCAGGGGATGGCCCAGGGCGATGGCGCCGCCGTTGCGGTTGACTCGCGGGTCGTCGTCGGCCAGGCCCAGCTCGCGCAACACGGCCAGCCCTTGGGCGGCAAAGGCCTCATTGAGTTCGATGACATc                         >  3:26791/1‑147 (MQ=255)                                                                                                                                 ccGGGCACCGCTCATGCCCAGGGGATGGCCCAGGGCGATGGCGCCGCCGTTGCGGTTGACTCGCGGGTCGTCGTCGGCCAGGCCCAGCTCGCGCAACACGGCCAGCCCTTGGGCGGCAAAGGCCTCATTGAGTTCGATGACATCCAGGt                    >  5:135595/1‑149 (MQ=255)                                                                                                                                                gCCCAagggctggccgtgttgcgcgagctgggcctggccgacgacgacccgcgagtcaaccgcaacggcggcgccatcgccctgggccatcccctgggcatgagcggtgcccggttggtgaccactgccttgcacgagcttgaagaaac     <  1:103441‑M1/149‑145 (MQ=255)                                                                                                                                                 cccAagggctggccgtgttgcgcgagctgggcctggccgacgacgacccgcgagtcaaccgcaacggcggcgccatcgccctgggccatcccctgggcatgagcggtgcccggttggtgaccactgccttgcacgagcttgaagaaacg    <  7:207666‑M1/149‑146 (MQ=255)                                                                                                                                                 cccAGGGGATGGCCCAGGGCGATGGCGCCGCCGTTGCGGTTGACTCGCGGGTCGTCGTCGGCCAGGCCCAGCTCGCGCAACACGGCCAGCCCTTGGGCGGCAAAGGCCTCATTGAGTTCGATGACATCCAGGTCAGCCAGTGCCAGGc     <  4:296658/148‑1 (MQ=255)                                                                                                                                                  ccAagggctggccgtgttgcgcgagctgggcctggccgacgacgacccgcgagtcaaccgcaacggcggcgccatcgccctgggccatcccctgggcatgagcggtgcccggttggtgaccactgccttgcacgagcttgaagaaacgg   >  7:143588‑M1/1‑3 (MQ=255)                                                                                                                                                  ccAGGGGATGGCCCAGGGCGATGGCGCCGCCGTTGCGGTTGACTCGCGGGTCGTCGTCGGCCAGGCCCAGCTCGCGCAACACGGCCAGCCCTTGGGCGGCAAAGGCCTCATTGAGTTCGATGACATCCAGGTCAGCCAGTGCCAGGCCg   <  8:207666/149‑1 (MQ=255)                                                                                                                                                   cAagggctggccgtgttgcgcgagctgggcctggccgacgacgacccgcgagtcaaccgcaacggcggcgccatcgccctgggccatcccctgggcatgagcggtgcccggttggtgaccactgccttgcacgagcttgaagaaacggc  >  1:50690‑M1/1‑2 (MQ=255)                                                                                                                                                   cAGGGGATGGCCCAGGGCGATGGCGCCGCCGTTGCGGTTGTCTCGCGGGTCGTCGTCGGCCAGGCCCAGCTCGCGCAACACGGCCAGCCCTTGGGCGGCAAAGGCCTCATTGAGTTCGATGACATCCAGGTCAGCCAGTGCCAGGCCgg  <  1:256193/149‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                                    GCAGGGTCTGAACCGCTCAGAGGCGCTCGATGATCATGGCAATGCCTTGGCCTACGCCGATGCACATGGTGCACAGGGCGTAGCGGCCGGCCGTTTCTTCA‑AGCTCGTGCAAGGCAGTGGTCACCAACCGGGCACCGCTCATGCCCAGGGGATGGCCCAGGGCGATGGCGCCGCCGTTGCGGTTGACTCGCGGGTCGTCGTCGGCCAGGCCCAGCTCGCGCAACACGGCCAGCCCTTGGGCGGCAAAGGCCTCATTGAGTTCGATGACATCCAGGTCAGCCAGTGCCAGGCCGG  >  NC_002947/3714619‑3714912

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.