New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3714765	48 (0.980)	4 (0.090)	4/252	NT	7.6%	coding (1091/1221 nt)	paaJ	3‑oxoadipyl‑CoA/3‑oxo‑5,6‑dehydrosuberyl‑CoA thiolase
	?	NC_002947	= 3714854	51 (1.080)					coding (1002/1221 nt)	paaJ	3‑oxoadipyl‑CoA/3‑oxo‑5,6‑dehydrosuberyl‑CoA thiolase

CGGCCGTTTCTTCAAGCTCGTGCAAGGCAGTGGTCACCAACCGGGCACCGCTCATGCCCAGGGGATGGCCCAGGGCGATGGCGCCGCCGTTGCGGTTGACTCGCGGGTCGTCGTCGGCCAGGCCCAGCTCGCGCAACACGGCCAGCCCTTGGGCGGCAAAGGCCTCATTGAGTTCGATGACATCCAGGTCAGCCAGTGCCAGGCCGGTGAGCGCCAGCACCTTGCGGGTCGCAGGCACCGGACCAATGCCCATCAGCCTGGGCTCAACCCCGGCCACCGCCATGCCGACGATGCGG  >  NC_002947/3714706‑3715001                                                                                                                                                     |                                                                                                                                                    cggccgTTTCTTCAAGCTCGTGCAAGGCAGTGGTCACCAACCGGGCACCGCTCATGCCCAGGGGATGGCCCAGGGCGATGGCGCCGCCGTTGCGGTTGACTCGCGGGTCGTCGTCGGCCAGGCCCAGCTCGCGCAACACGGCCAGCCCt                                                                                                                                                     <  1:150608/149‑1 (MQ=255)   gCCGTTTCTTCAAGCTCGTGCAAGGCAGTGGTCACCAACCGGGCACCGCTCATGCCCAGGGGATGGCCCAGGGCGATGGCGCCGCCGTTGCGGTTGACTCGCGGGTCGTCGTCGGCCAGGCCCAGCTCGCGCAACACGGCCAGCCCTtg                                                                                                                                                   >  1:50690‑M2/1‑147 (MQ=255)    ccGTTTCTTCAAGCTCGTGCAAGGCAGTGGTCACCAACCGGGCACCGCTCATGCCCAGGGGATGGCCCAGGGCGATGGCGCCGCCGTTGCGGTTGACTCGCGGGTCGTCGTCGGCCAGGCCCAGCTCGCGCAACACGGCCAGCCCTtgg                                                                                                                                                  >  7:143588‑M2/1‑146 (MQ=255)     cGTTTCTTCAAGCTCGTGCAAGGCAGTGGTCACCAACCGGGCACCGCTCATGCCCAGGGGATGGCCCAGGGCGATGGCGCCGCCGTTGCGGTTGACTCGCGGGTCGTCGTCGGCCAGGCCCAGCTCGCGCAACACGGCCAGCCCTtggg                                                                                                                                                 <  7:207666‑M2/149‑5 (MQ=255)      gTTTCTTCAAGCTCGTGCAAGGCAGTGGTCACCAACCGGGCACCGCTCATGCCCAGGGGATGGCCCAGGGCGATGGCGCCGCCGTTGCGGTTGACTCGCGGGTCGTCGTCGGCCAGGCCCAGCTCGCGCAACACGGCCAGCCCTtgggc                                                                                                                                                <  1:103441‑M2/149‑6 (MQ=255)          cttcAAGCTCGTGCAAGGCAGTGGTCACCAACCGGGCACCGCTCATGCCCAGGGGATGGCCCAGGGCGATGGAGCCGCCGTTGCGGTTGACTCGCGGGTCGTCGTCGGCCAGGCCCAGCTCGCGCAACACGGCCAGCCCTTGggcggc                                                                                                                                             >  3:212287/1‑148 (MQ=255)              aaGCTCGTGCAAGGCAGTGGTCACCAACCGGGCACCGCTCATGCCCAGGGGATGGCCCAGGGCGATGGCGCCGCCGTTGCGGTTGACTCGCGGGTCGTCGTCGGCCAGGCCCAGCTCGCGCAACACGGCCAGCCCTTGGGCGGCAAAgg                                                                                                                                        >  3:296658/1‑149 (MQ=255)              aaGCTCGTGCAAGGCAGTGGTCACCAACCGGGCACCGCTCATGCCCAGGGGATGGCCCAGGGCGATGGCGCCGCCGTTGCGGTTGACTCGCGGGTCGTCGTCGGCCAGGCCCAGCTCGCGCAACACGGCCAGCCCTTGGGCGGCAAAgg                                                                                                                                        <  3:24917/149‑1 (MQ=255)              aaGCTCGTGCAAGGCAGTGGTCACCAACCGGGCACCGCTCATGCCCAGGGGATGGCCCAGGGCGATGGCGCCGCCGTTGCGGTTGACTCGCGGGTCGTCGTCGGCCAGGCCCAGCTCGCGCAACACGGCCAGCCCTTGGGCGGCAAAgg                                                                                                                                        >  2:31818/1‑149 (MQ=255)               aGCTCGTGCAAGGCAGTGGTCACCAACCGGGCACCGCTCATGCCCAGGGGATGGCCCAGGGCGATGGCGCCGCCGTTGCGGTTGACTCGCGGGTCGTCGTCGGCCAGGCCCAGCTCGCGCAACACGGCCAGCCCTTGGGCGGCAAAGGc                                                                                                                                       <  4:212287/149‑1 (MQ=255)               aGCTCGTGCAAGGCAGTGGTCACCAACCGGGCACCGCTCATGCCCAGGGGATGGCCCAGGGCGATGGCGCCGCCGTTGCGGTTGACTCGCGGGTCGTCGTCGGCCAGGCCCAGCTCGCGCAACACGGCCAGCCCTTGGGCGGCAAAGGc                                                                                                                                       <  3:297113/149‑1 (MQ=255)                    gTGCAAGGCAGTGGTCACCAACCGGGCACCGCTCATGCCCAGGGGATGGCCCAGGGCGATGGCGCCGCCGTTGCGGTTGACTCGCGGGTCGTCGTCGGCCAGGCCCAGCTCGCGCAACACGGCCAGCCCTTGGGCGGCAAAGGCCTCa                                                                                                                                   <  5:18157/148‑1 (MQ=255)                     tGCAAGGCAGTGGTCACCAACCGGGCACCGCTCATGCCCAGGGGATGGCCCAGGGCGATGGCGCCGCCGTTGCGGTTGACTCGCGGGTCGTCGTCGGCCAGGCCCAGCTCGCGCAACACGGCCAGCCCTTGGGCGGCAAAGGCCTCAtt                                                                                                                                 <  1:31818/149‑1 (MQ=255)                              gTGGTCAGCAACCGGGCACCGGTCTTGCCCAGGGGATGGCCCAGGGCGATGGGGCGGCCGTTGCGGTTGACTCGAGGGTCGTCGTCGGCCAGGCCCAGCTCGCGCAACACGGCCAGCCCTTGGGCGGCAAAGGCCTCATTGAGTTCGAt                                                                                                                        <  3:26391/149‑1 (MQ=255)                              gTGGTCACCAACCGGGCACCGCTCATGCCCAGGGGATGGCCCAGGGCGATGGCGCCGCCGTTGCGGTTGACTCGCGGGTCGTCGTCGGCCAGGCCCAGCTCGCGCAACACGGCCAGCCCTTGGGCGGCAAAGGCCTCATTGAGTTCGAt                                                                                                                        <  1:68094/149‑1 (MQ=255)                               tGGTCACCAACCGGGCACCGCTCATGCCCAGGGGATGGCCCAGGGCGATGGCGCCGCCGTTGCGGTTGACTCGCGGGTCGTCGTCGGCCAGGCCCAGCTCGCGCAACACGGCCAGCCCTTGGGCGGCAAAGGCCTCATTGAGTTCGAt                                                                                                                        <  1:18271/148‑1 (MQ=255)                               tGGTCACCAACCGGGCACCGCTCATGCCCAGGGGATGGCCCAGGGCGATGGCGCCGCCGTTGCGGTTGACTCGCGGGTCGTCGTCGGCCAGGCCCAGCTCGCGCAACACGGCCAGCCCTTGGGCGGCAAAGGCCTCATTGAGTTCGAt                                                                                                                        >  2:18271/1‑148 (MQ=255)                               tGGTCACCAACCGGGCACCGCTCATGCCCAGGGGATGGCCCAGGGCGATGGCGCCGCCGTTGCGGTTGACTCGCGGGTCGTCGTCGGCCAGGCCCAGCTCGCGCAACACGGCCAGCCCTTGGGCGGCAAAGGCCTCATTGAGTTCGATg                                                                                                                       <  4:252249/149‑1 (MQ=255)                                    aCCAACCGGGCACCGCTCATGCCCAGGGGATGGCCCAGGGCGATGGCGCCGCCGTTGCGGTTGACTCGCGGGTCGTCGTCGGCCAGGCCCAGCTCGCGCAACACGGCCAGCCCTTGGGCGGCAAAGGCCTCATTGAGTTCGATGACATc                                                                                                                  >  8:29293/1‑149 (MQ=255)                                     ccAACCGGGCACCGCTCATGCCCAGGGGATGGCCCAGGGCGATGGCGCCGCCGTTGCGGTTGACTCGCGGGTCGTCGTCGGCCAGGCCCAGCTCGCGCAACACGGCCAGCCCTTGGGCGGCAAAGGCCTCATTGAGTTCGATGACATcc                                                                                                                 <  1:153178/149‑1 (MQ=255)                                      cAACCGGGCACCGCTCATGCCCAGGGGATGGCCCAGGGCGATGGCGCCGCCGTTGCGGTTGACTCGCGGGTCGTCGTCGGCCAGGCCCAGCTCGCGCAACACGGCCAGCCCTTGGGCGGCAAAGGCCTCATTGAGTTCGATGACATc                                                                                                                  >  3:26791/1‑147 (MQ=255)                                         ccGGGCACCGCTCATGCCCAGGGGATGGCCCAGGGCGATGGCGCCGCCGTTGCGGTTGACTCGCGGGTCGTCGTCGGCCAGGCCCAGCTCGCGCAACACGGCCAGCCCTTGGGCGGCAAAGGCCTCATTGAGTTCGATGACATCCAGGt                                                                                                             >  5:135595/1‑149 (MQ=255)                                                         cccAGGGGATGGCCCAGGGCGATGGCGCCGCCGTTGCGGTTGACTCGCGGGTCGTCGTCGGCCAGGCCCAGCTCGCGCAACACGGCCAGCCCTTGGGCGGCAAAGGCCTCATTGAGTTCGATGACATCCAGGTCAGCCAGTGCCAGGc                                                                                              <  4:296658/148‑1 (MQ=255)                                                          ccAGGGGATGGCCCAGGGCGATGGCGCCGCCGTTGCGGTTGACTCGCGGGTCGTCGTCGGCCAGGCCCAGCTCGCGCAACACGGCCAGCCCTTGGGCGGCAAAGGCCTCATTGAGTTCGATGACATCCAGGTCAGCCAGTGCCAGGCCg                                                                                            <  8:207666/149‑1 (MQ=255)                                                           cAGGGGATGGCCCAGGGCGATGGCGCCGCCGTTGCGGTTGTCTCGCGGGTCGTCGTCGGCCAGGCCCAGCTCGCGCAACACGGCCAGCCCTTGGGCGGCAAAGGCCTCATTGAGTTCGATGACATCCAGGTCAGCCAGTGCCAGGCCgg                                                                                           <  1:256193/149‑1 (MQ=255)                                                             ggggATGGCCCAGGGCGATGGCGCCGCCGTTGCGGTTGACTCGCGGGTCGTCGTCGGCCAGGCCCAGCTCGCGCAACACGGCCAGCCCTtgggcatgagcggtgcccggttggtgaccactgccttgcacga                                                                                                          <  8:235636‑M2/132‑44 (MQ=255)                                                             ggggATGGCCCAGGGCGATGGCGCCGCCGTTGCGGTTGACTCGCGGGTCGTCGTCGGCCAGGCCCAGCTCGCGCAACACGGCCAGCCCTtgggcatgagcggtgcccggttggtgaccactgccttgcacga                                                                                                          >  7:235636‑M2/1‑89 (MQ=255)                                                             ggggATGGCCCAGGGCGATGGCGCCGCCGTTGCGGTTGACTCGCGGGTCGTCGTCGGCCAGGCCCAGCTCGCGCAACACGGCCAGCCCTTGGGCGGCAAAGGCCTCATTGAGTTCGATGACATCCAGGTCAGCCAGTGCCAGGCCGGTg                                                                                         <  5:16301/149‑1 (MQ=255)                                                              gggATGGCCCAGGGCGATGGCGCCGCCGTTGCGGTTGACTCGCGGGTCGTCGTCGGCCAGGCCCAGCTCGCGCAACACGGCCAGCCCTtgggcatgagcggtgcccggttggtgaccactgccttgcacgagcttgaagaaacggccgg                                                                                        <  2:140615‑M2/149‑62 (MQ=255)                                                                  tGGCCCAGGGCGATGGCGCCGCCGTTGCGGTTGACTCGCGGGTCGTCGTCGGCCAGGCCCAGCTCGCGCAACACGGCCAGCCCTTGGGCGGCAAAGGCCTCATTGAGTTCGATGACATCCAGGTCAGCCAGTGc                                                                                                   <  3:53290/134‑1 (MQ=255)                                                                  tGGCCCAGGGCGATGGCGCCGCCGTTGCGGTTGACTCGCGGGTCGTCGTCGGCCAGGCCCAGCTCGCCCAACACGGCCAGCCCTTGGGCGGCAAAGGCCTCATTGAGTTCGATGACATCCAGGTCAGCCAGTGc                                                                                                   >  4:53290/1‑134 (MQ=255)                                                                    gCCCAGGGCGATGGCGCCGCCGTTGCGGTTGACTCGCGGGTCGTCGTCGGCCAGGCCCAGCTCGCGCAACACGGCCAGCCCTTGGGCGGCAAAGGCCTCATTGAGTTCGATGACATCCAGGTCAGCCAGTGCCAGGCCGGTGAgcgc                                                                                    >  3:151648/1‑147 (MQ=255)                                                                             gATGGCGCCGCCGTTGCGGTTGACTCGCGGGTCGTCGTCGGCCAGGCCCAGCTCGCGCAACACGGCCAGCCCTTGGGCGGCAAAGGCCTCATTGAGTTCGATGACATCCAGGTCAGCCAGTGCCAGGCCGGTGAGCGCCAGCACCTTGc                                                                         >  3:247357/1‑149 (MQ=255)                                                                                ggCGCCGCCGTTGCGGTTGACTCGCGGGTCGTCGTCGGCCAGGCCCAGCTCGCGCAACACGGCCAGCCCTTGGGCGGCAAAGGCCTCATTGAGTTCGATGACATCCAGGTCAGCCAGTGCCAGGCCGGTGAGCGCCAGCACCTTGCgg                                                                       <  2:103441/148‑1 (MQ=255)                                                                                     cgccgTTGCGGTTGACTCGCGGGTCGTCGTCGGCCAGGCCCAGCTCGCGCAACACGGCCAGCCCTtgggcatgagcggtgcccggttggtgaccactgccttgcacgagcttgaagaaacggccggccgctacgccctgtgcaccatgt                                                                 >  1:140615‑M2/1‑65 (MQ=255)                                                                                     cgccgTTGCGGTTGACTCGCGGGTCGTCGTCGGCCAGGCCCAGCTCGCGCAACACGGCCAGCCCTTGGGCGGCAAAGGCCTCATTGAGTTCGATGACATCCAGGTCAGCCAGTGCCAGGCCGGTGAGCGCCAGCACCTTGCGGGTCGCa                                                                 <  6:135595/149‑1 (MQ=255)                                                                                      gccgTTGCGGTTGACTCGCGGGTCGTCGTCGGCCAGGCCCAGCTCGCGCAACACGGCCAGCCCTTGGGCGGCAAAGGCCTCATTGAGTTCGATGACATCCAGGTCAGCCAGTGCCAGGCCGGTGAGCGCCAGCACCTTGCGGGTCGCAg                                                                >  6:138209/1‑149 (MQ=255)                                                                                        cgTTGCGGTTGACTCGCGGGTCGTCGTCGGCCAGGCCCAGCTCGCGCAACACGGCCAGCCCTTGGGCGGCAAAGGCCTCATTGAGTTCGATGACATCCAGGTCAGCCAGTGCCAGGCCGGTGAGCGCCAGCACCTTGCGGGTCGCAGGc                                                              <  7:29293/149‑1 (MQ=255)                                                                                                ttGACTCGCGGGTCGTCGTCGGCCAGGCCCAGCTCGCGCAACACGGCCAGCCCTTGGGCGGCAAAGGCCTCATTGAGTTCGATGACATCCAGGTCAGCCAGTGCCAgg                                                                                               >  6:16423/1‑108 (MQ=255)                                                                                                ttGACTCGCGGGTCGTCGTCGGCCAGGCCCAGCTCGCGCAACACGGCCAGCCCTTGGGCGGCAAAGGCCTCATTGAGTTCGATGACATCCAGGTCAGCCAGTGCCAgg                                                                                               <  5:16423/108‑1 (MQ=255)                                                                                                           gtcgtcgtcGGCCAGGCCCAGCTCGCGCAACACGGCCAGCCCTTGGGCGGCAAAGGCCTCATTGAGTTCGATGACATCCAGGTCAGCCAGTGCCAGGCCGGTGAGCGCCAGCACCTTGCGGGTCGCAGGCACCGGCCCCATGCCCAt                                             >  1:205975/1‑147 (MQ=255)                                                                                                                 gtcgGCCAGGCCCAGCTCGCGCAACACGGCCAGCCCTTGGGCGGCAAAGGCCTCATTGAGTTCGATGACATCCAGGTCAGCCAGTGCCAGGCCGGTGAGCGCCAGCACCTTGCGGGTCGCAGGCACCGGACCAATGCCCATCCGCCTgg                                     >  8:198642/1‑149 (MQ=255)                                                                                                                  tcgGCCAGGCCCAGCTCGCGCAACACGGCCAGCCCTTGGGCGGCAAAGGCCTCATTGAGTTCGATGACATCCAGGTCAGCCAGTGCCAGGCCGGTGAGCGCCAGCACCTTGCGGGTCGCAGGCACCGGACCAATGCCCATCAGCCTggg                                    <  4:149371/149‑1 (MQ=255)                                                                                                                    ggCCAGGCCCAGCTCGCGCAACACGGCCAGCCCTTGGGCGGCAAAGGCCTCATTGAGTTCGATGACATCCAGGTCAGCCAGTGCCAGGCCGGTGAGCGCCAGCACCTTGCGGGTCGCAGGCACCGGACCAATGCCCATCAGCCTGGGc                                   <  4:247357/148‑1 (MQ=255)                                                                                                                    ggCCAGGCCCAGCTCGCGCAACACGGCCAGCCCTTGGGCGGCAAAGGCCTCATTGAGTTCGATGACATCCAGGTCAGCCAGTGCCAGGCCGGTGAGCGCCAGCACCTTGCGGGTCGCAGGCACCGGACCAATGCCCATCAGCCTGGGCt                                  >  4:285297/1‑149 (MQ=255)                                                                                                                     gCCAGGCCCAGCTCGCGCAACACGGCCAGCCCTTGGGCGGCAAAGGCCTCATTGAGTTCGATGACATCCAGGTCAGCCAGTGCCAGGCCGGTGAGCGCCAGAACCTTGCGGGTCGCAGGCACCGGACCAATGCCCATCAGCCTGGGCt                                  >  3:74634/1‑148 (MQ=255)                                                                                                                        aGGCCCAGCTCGCGCAACACGGCCAGCCCTTGGGCGGCAAAGGCCTCATTGAGTTCGATGACATCCAGGTCAGCCAGTGCCAGGCCGGTGAGCGCCAGCACCTTGCGGGTCGCAGGCACCGGACCAATGCCCATCAGCCTGGGCTCAAc                              >  5:5357/1‑149 (MQ=255)                                                                                                                            ccAGCTCGCGCAACACGGCCAGCCCTTGGGCGGCAAAGGCCTCATTGAGTTCGATGACATCCAGGTCAGCCAGTGCCAGGCCGGTGAGCGCCAGCACCTTGCGGGTCGCAGGCACCGGACCAATGCCCATCAGCCTGGGCTCAACCCCg                          >  7:211108/1‑149 (MQ=255)                                                                                                                             cAGCTCGCGCAACACGGCCAGCCCTTGGGCGGCAAAGGCCTCATTGAGTTCGATGACATCCAGGTCAGCCAGTGCCAGGCCGGTGAGCGCCAGCACCTTGCGGGTCGCAGGCACCGGACCAATGCCCATCAGCCTGGGCTCAACCCCgg                         >  2:90379/1‑149 (MQ=255)                                                                                                                                cTCGCGCAACACGGCCAGCCCTTGGGCGGCAAAGGCCTCATTGAGTTCGATGACATCCAGGTCAGCCAGTGCCAGGCCGGTGAGCGCCAGCACCTTGCGGGTCGCAGGCACCGGACCAATGCCCATCAGCCTGGGCTCAACCCCGGCCa                      >  4:39867/1‑149 (MQ=255)                                                                                                                                   gcgcAACACGGCCAGCCCTTGGGCGGCAAAGGCCTCATTGAGTTCGATGACATCCAGGTCAGCCAGTGCCAGGCCGGTGAGCGCCAGCACCTTGCGGGTCGCAGGCACCGGACCAATGCCCATCAGCCTGGGCTCAACCCCGGCCACCg                   >  8:158745/1‑149 (MQ=255)                                                                                                                                    cgcAACACGGCCAGCCCTTGGGCGGCAAAGGCCTCATTGAGTTCGATGACATCCAGGTCAGCCAGTGCCAGGCCGGTGAGCGCCAGCACCTTGCGGGTCGCAGGCACCGGACCAATGCCCATCAGCCTGGGCTCAACCCCGGCCACCGc                  >  2:17387/1‑149 (MQ=255)                                                                                                                                       aaCACGGCCAGCCCTTGGGCGGCAAAGGCCTCATTGAGTTCGATGACATCCAGGTCAGc                                                                                                         <  3:75070/59‑1 (MQ=255)                                                                                                                                       aaCACGGCCAGCCCTTGGGCGGCAAAGGCCTCATTGAGTTCGATGACATCCAGGTCAGc                                                                                                         >  4:75070/1‑59 (MQ=255)                                                                                                                                       aaCACGGCCAGCCCTTGGGCGGCAAAGGCCTCATTGAGTTCGATGACATCCAGGTCAGCCAGTGCCAGGCCGGTGAGCGCCAGCACCTTGCGGGTCGCAGGCACCGGACCAATGCCCATCAGCCTGGGCTCAAcc                             >  7:10692/1‑135 (MQ=255)                                                                                                                                       aaCACGGCCAGCCCTTGGGCGGCAAAGGCCTCATTGAGTTCGATGACATCCAGGTCAGCCAGTGCCAGGCCGGTGAGCGCCAGCACCTTGCGGGTCGCAGGCACCGGACCAATGCCCATCAGCCTGGGCTCAAcc                             <  8:10692/135‑1 (MQ=255)                                                                                                                                         cacGGCCAGCCCTTGGGCGGCAAAGGCCTCATTGAGTTc                                                                                                                           <  2:152552/39‑1 (MQ=255)                                                                                                                                         cacGGCCAGCCCTTGGGCGGCAAAGGCCTCATTGAGTTc                                                                                                                           >  1:152552/1‑39 (MQ=255)                                                                                                                                              ccAGCCCTTGGGCGGCAAAGGCCTCATTGAGTTCGATGACATCCAGGTCAGCCAGTGCCAGGCCGGTGAGCGCCCGCACCTTGCGGGTCGCAGGCACCGGACCAATGCCCATCAGCCTGGGCTCAACCCCGGCCACCGCCATGCcgac         >  5:105727/1‑148 (MQ=255)                                                                                                                                              ccAGCCCTTGGGCGGCAAAGGCCTCATTGAGTTCGATGACATCCAGGTCAGCCAGTGCCAGGCCGGTGAGCGCCAGCACCTTGCGGGTCGCAGGCACCGGACCAATGCCCATCAGCCTGGGCTCAACCCCGGCCACCGCCATGCcgac         >  3:194603/1‑148 (MQ=255)                                                                                                                                               cAGCCCTTGGGCGGCAAAGGCCTCATTGAGTTCGATGACATCCAGGTCAGCCAGTGCCAGGCCGGTGAGCGCCAGCACCTTGCGGGTCGCAGGCACCGGACCAATGCCCATCAGCCTGGGCTCAACCCCGGCCACCGCCATGCcgacga       >  4:281007/1‑149 (MQ=255)                                                                                                                                                    cTTGGGCGGCAAAGGCCTCATTGAGTTCGATGACATCCAGGTCAGCCAGTGCCAGGCCGGTGAGCGCCAGCACCTTGCGGGTCGCAGGCACCGGACCAATGCCCATCAGCCTGGGCTCAACCCCGGCCACCGCCATGCCGACGATGCgg  <  3:39867/149‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                    CGGCCGTTTCTTCAAGCTCGTGCAAGGCAGTGGTCACCAACCGGGCACCGCTCATGCCCAGGGGATGGCCCAGGGCGATGGCGCCGCCGTTGCGGTTGACTCGCGGGTCGTCGTCGGCCAGGCCCAGCTCGCGCAACACGGCCAGCCCTTGGGCGGCAAAGGCCTCATTGAGTTCGATGACATCCAGGTCAGCCAGTGCCAGGCCGGTGAGCGCCAGCACCTTGCGGGTCGCAGGCACCGGACCAATGCCCATCAGCCTGGGCTCAACCCCGGCCACCGCCATGCCGACGATGCGG  >  NC_002947/3714706‑3715001

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.