New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3861513	46 (0.940)	6 (0.130)	5/246	NT	12.1%	coding (436/3282 nt)	PP_3413	two‑component system sensor histidine kinase/response regulator
	?	NC_002947	= 3861577	44 (0.960)					coding (500/3282 nt)	PP_3413	two‑component system sensor histidine kinase/response regulator

TCGTTTTGACAGCCGTCACGAGGCCATCACTGCCCTGCGTGATGGCCGTATCGACTTGTTGGGTAGCTCCAACGCCTTCGAGGCGGCGGACGCCCAGCTAAGCCTCAGCACCCCCTATGCCGACGACCTGCCAGTGATCGTCACCCGTGAAGGGCGCAGCTTGAAAAGTACGCCCGAGCTCGCCGGCCTGCGCCTGGCGATGGTCGATCACTACCTGCCGGCCGTCAGCGTTCGCACACTGTACCCCAAGGCGCAACTGAGCCTGTACCGCTCGACCCTGGCCGGGC  >  NC_002947/3861374‑3861660                                                                                                                                            |                                                                                                                                                    tcgtTTTGACAGCCGTCACGAGGCCATCACTGCCCTGCGTGATGGCCGTATCGACTTGTTGGGTAGCTCCAACGCCTTCGAGGCGGCGGACGCCCAGCTAAGCCTCAGCACCCCCTATGCCGACGACCTGCCAGTGATCGTCACCCGtt                                                                                                                                            <  6:199793/149‑2 (MQ=255)    ttttGACAGCCGTCACGAGGCCATCACTGCCCTGCGTGATGGCCGTATCGACTTGTTGGGTAGCTCCAACGCCTTCGAGGCGGCGGACGCCCAGCTAAGCCTCAGCACCCCCTATGCCGACGACCTGCCAGTGATCGTCACCCGTGAAg                                                                                                                                         <  1:7747/149‑1 (MQ=255)       tGACAGCCGTCACGAGGCCATCACTGCCCTGCGTGATGGCCGTATCGACTTGTTGGGTAGCTCCAACGCCTTCGAGGCGGCGGACGCCCAGCTAAGCCTCAGCACCCCCTATGCCGACGACCTGCCAGTGATCGTCACCCGTGAAGGgc                                                                                                                                      >  7:18413/1‑149 (MQ=255)        gACAGCCGTCACGAGGCCATCACTGCCCTGCGTGATGGCCGTATCGACTTGTTGGGTAGCTCCAACGCCTTCGAGGCGGCGGACGCCCAGCTAAGCCTCAGCACCCCCTATGCCGACGACCTGCCAGTGATCGTCACCCGTGAAGGgcg                                                                                                                                     >  8:56201/1‑149 (MQ=255)          cAGCCGTCACGAGGCCATCACTGCCCTGCGTGATGGCCGTATCGACTTGTTGGGTAGCTCCAACGCCTTCGAGGCGGCGGACGCCCAGCTAAGCCTCAGCACCCCCTATGCCGACGACCTGCCAGTGATCGTCACCCGTGAAGGGCGCa                                                                                                                                   <  3:183978/149‑1 (MQ=255)                  aCGAGGCCATCACTGCCCTGCGTGATGGCCGTATCGACTTGTTGGGTAGCTCCAACGCCTTCGAGGCGGCGGACGCCCAGCTAAGCCTCAGCACCCCCTATGCCGACGACCTGCCAGTGATCGaccatcgccaggcgcaggccggcgag                                                                                                                           >  7:76861‑M1/1‑123 (MQ=255)                  aCGAGGCCATCACTGCCCTGCGTGATGGCCGTATCGACTTGTTGGGTAGCTCCAACGCCTTCGAGGCGGCGGACGCCCAGCTAAGCCTCAGCACCCCCTATGCCGACGACCTGCCAGTGATCGTCACCCGTGAAGGGCGCAGCTTGaaa                                                                                                                           <  8:261730/149‑1 (MQ=255)                    gAGGCCATCACTGCCCTGCGTGATGGCCGTATCGACTTGTTGGGTAGCTCCAACGCCTTCGAGGCGGCGGACGCCCAGCTAAGCCTCAGCACCCCCTATGCCGACGACCTGCCAGTGATCGTCACCCGTGAAGGGCGCa                                                                                                                                   >  1:262152/1‑139 (MQ=255)                    gAGGCCATCACTGCCCTGCGTGATGGCCGTATCGACTTGTTGGGTAGCTCCAACGCCTTCGAGGCGGCGGACGCCCAGCTAAGCCTCAGCACCCCCTATGCCGACGACCTGCCAGTGATCGTCACCCGTGAAGGGCGCa                                                                                                                                   <  2:262152/139‑1 (MQ=255)                      ggCCATCACTGCCCTGCGTGATGGCCGTATCGACTTGTTGGGTAGCTCCAACGCCTTCGAGGCGGCGGACGCCCAGCTAAGCCTCAGCACCCCCTATGCCGACGACCTGCCAGTGATCGTCACCCGTGAAGGGCGCAGCTTGAAAAGTa                                                                                                                       <  4:8476/149‑1 (MQ=255)                           tCACTGCCCTGCGTGATGGCCGTATCGACTTGTTGGGTAGCTCCAACGCCTTCGAGGCGGCGGACGCCCAGCTAAGCCTCAGCACCCCCTATGCCGACGACCTGCCAGTGATCGTCACCCGTGAAGGGCGCAGCTTGAAAAGTACGccc                                                                                                                  <  3:57896/149‑1 (MQ=255)                               tGCCCTGCGTGATGGCCGTATCGACTTGTTGGGTAGCTCCAACGCCTTCGAGGCGGCGGACGCCCAGCTAAGCCTCAGCACCCCCTATGCCGACGACCTGCCAGTGATCGTCACCCGTGAAGGGCGCAGCTTGAAAAGTACGCCCGAGc                                                                                                              >  6:111946/1‑149 (MQ=255)                                     gCGTGATGGCCGTATCGACTTGTTGGGTAGCTCCAACGCCTTCGAGGCGGCGGACGCCCAGCTAAGCCTCAGCACCCCCTATGCCGACGACCTGCCAGTGATCGTCACCCGTGAAGGGCGCAGCTTGAAAAGTACGCCCTAGCTCGCCg                                                                                                        >  7:13250/1‑149 (MQ=255)                                               cGTATCGACTTGTTGGGTAGCTCCAACGCCTTCGAGGCGGCGGACGCCCAGCTAAGCCTCAGCACCCCCTATGCCGACGACCTGCCAGTGATCGTCACCCGTGAAGGGCGCAGCTTGAAAAGTACGCCCGAGCTCGCCGGCCTGCGCCt                                                                                              <  7:56201/149‑1 (MQ=255)                                                    cGACTTGTTGGGTAGCTCCAACGCCTTCGAGGCGGCGGACGCCCAGCTAAGCCTCAGCACCCCCTATGCCGACGACCTGCCAGTGATCGaccatcgccaggcgcaggccggcgagctcgggcgtacttttcaagctgcgcccttcacgg                                                                                         >  1:276728‑M1/1‑89 (MQ=255)                                                     gACTTGTTGGGTAGCTCCAACGCCTTCGAGGCGGCGGACGCCCAGCTAAGCCTCAGCACCCCCTATGCCGACGACCTGCCAGTGATCGTCACCCGTGAAGGGCGCAGCTTGAAAAGTACGCCCGAGCTCGCCGGCCTGCGCCTgg                                                                                            <  6:10236/145‑1 (MQ=255)                                                     gACTTGTTGGGTAGCTCCAACGCCTTCGAGGCGGCGGACGCCCAGCTAAGCCTCAGCACCCCCTATGCCGACGACCTGCCAGTGATCGTCACCCGTGAAGGGCGCAGCTTGAAAAGTACGCCCGAGCTCGCCGGCCTGCGCCTgg                                                                                            >  5:10236/1‑145 (MQ=255)                                                      aCTTGTTGGGTAGCTCCAACGCCTTCGAGGCGGCGGACGCCCAGCTAAGCCTCAGCAACCCCTATGCCGACGACCTGCCAGTGATCGTCACCCGTGAAGGGCGCAGCTTGAAAAGTACGCCCGAGCTCGCCGGCCTGCGCCTGGCGATg                                                                                       >  5:209535/1‑149 (MQ=255)                                                        ttgttgGGTAGCTCCAACGCCTTCGAGGCGGCGGACGCCCAGCTAAGCCTCAGCACCCCCTATGCCGACGACCTGCCAGTGATCGaccatcgccaggcgcaggccggcgagctcgggcgtacttttcaagctgcgcccttcacgggtga                                                                                     >  5:248259‑M1/1‑85 (MQ=255)                                                        ttgttgGGTAGCTCCAACGCCTTCGAGGCGGCGGACGCCCAGCTAAGCCTCAGCACCCCCTATGCCGACGACCTGCCAGTGATCGTCACCCGTGAAGGGCGCAGCTTGAAAAGTACGCCCGAGCTCGCCGGCCTGCGCCTGGCGATGGt                                                                                     >  5:153202/1‑149 (MQ=255)                                                         ttttgGGTAGCTCCAACGCCTTCGAGGCGGCGTACGCCCAGCTAAGCCTCAGCACCCCCTATGCCGACGACCTGCCAGTGATCGTCACCCGTGAAGGGCGCAGCTTGAAAAGTACGCCCGAGCTCGCCGGCCTGCGCCTGGCGATGGt                                                                                     <  8:191784/146‑1 (MQ=255)                                                              ggTAGCTCCAACGCCTTCGAGGCGGCGGACGCCCAGCTAAGCCTCAGCACCCCCTATGCCGACGACCTGCCAGTGATCGaccatcgccaggcgcaggccggcgagctcgggcgtacttttcaagctgcgcccttcacgggtgacgatca                                                                               <  2:276728‑M1/149‑71 (MQ=255)                                                               gTAGCTCCAACGCCTTCGAGGCGGCGGACGCCCAGCTAAGCCTCAGCACCCCCTATGCCGACGACCTGCCAGTGATCGTCACCCGTGAAGGGCGCAGCTTGAAAAGTACGCCCGAGCt                                                                                                             <  3:142236/118‑1 (MQ=255)                                                               gTAGCTCCAACGCCTTCGAGGCGGCGGACGCCCAGCTAAGCCTCAGCACCCCCTATGCCGACGACCTGCCAGTGATCGTCACCCGTGAAGGGCGCAGCTTGAAAAGTACGCCCGAGCt                                                                                                             >  4:142236/1‑118 (MQ=255)                                                                    tCCAACGCCTTCGAGGCGGCGGACGCCCAGCTAAGCCTCAGCACCCCCTATGCCGACGACCTGCCAGTGATCGTCACCCGTGAAGGGCGCAGCTTGAAAAGTACGCCCGAGCTCGCCGGCCTGCGCCTGGCGATGGTcgatcact                                                                             <  1:110197‑M2/145‑9 (MQ=255)                                                                    tCCAACGCCTTCGAGGCGGCGGACGCCCAGCTAAGCCTCAGCACCCCCTATGCCGACGACCTGCCAGTGATCGTCACCCGTGAAGGGCGCAGCTTGAAAAGTACGCCCGAGCTCGCCGGCCTGCGCCTGGCGATGGTcgatcact                                                                             >  2:110197‑M2/1‑137 (MQ=255)                                                                    tCCAACGCCTTCGAGGCGGCGGACGCCCAGCTAAGCCTCAGCACCCCCTATGCCGACGACCTGCCAGTGATCGTCACCCGTGAAGGGCGCAGCTTGAAAAGTACGCCCGAGCTCGCCGGCCTGCGCCTGGCGATGGTCGATCACTAc                                                                           <  3:185303/147‑1 (MQ=255)                                                                    tCCAACGCCTTCGAGGCGGCGGACGCCCAGCTAAGCCTCAGCACCCCCTATGCCGACGACCTGCCAGTGATCGTCACCCGTGAAGGGCGCAGCTTGAAAAGTACGCCCGAGCTCGCCGGCCTGCGCCTGGCGATGGTCGATCACTAc                                                                           >  4:185303/1‑147 (MQ=255)                                                                      cAACGCCTTCGAGGCGGCGGACGCCCAGCTAAGCCTCAGCACCCCCTATGCCGACGACCTGCCAGTGATCGaccatcgccaggcgcaggccggcgagctcgggcgtacttttcaagctgcgcccttcacgggtgacgatcactggcag                                                                        <  8:76861‑M1/148‑78 (MQ=255)                                                                      cAACGCCTTCGAGGCGGCGGACGCCCAGCTAAGCCTCAGCACCCCCTATGCCGACGACCTGCCAGTGATCGaccatcgccaggcgcaggccggcgagctcgggcgtacttttcaagctgcgcccttcacgggtgacgatcactggcag                                                                        <  6:248259‑M1/148‑78 (MQ=255)                                                                      cAACGCCTTCGAGGCGGCGGACGCCCAGCTAAGCCTCAGCACCCCCTATGCCGACGACCTGCCAGTGATCGTCACCCGTGAAGGGCGCAGCTTGAAAAGTACGCCCGAGCTCGCCGGCCTGCGCCTGGCGATGGTCGATCACTACCTgc                                                                       >  8:95058/1‑149 (MQ=255)                                                                      cAACGCCTTCGAGGCGGCGGACGCCCAGCTAAGCCTCAGCACCCCCTATGCCGACGACCTGCCAGTGATCGTCACCCGTGAAGGGCGCAGCTTGAAAAGTACGCCCGAGCTCGCCGGCCTGCGCCTGGCGATGGTCGATCACTACCTgc                                                                       >  4:119103/1‑149 (MQ=255)                                                                         cGCCTTCGAGGCGGCGGACGCCCAGCTAAGCCTCAGCACCCCCTATGCCGACGACCTGCCAGTGATCGTCACCCGTGAAGGGCGCAGCTTGAAAAGTACGCCCGAGCTCGCCGGCCTGCGCCTGGCGATGGTCGATCACTACCTgccgg                                                                    <  3:107867/149‑1 (MQ=255)                                                                           ccTTCGAGGCGGCGGACGCCCAGCTAAGCCTCAGCACCCCCTATGCCGACGACCTGCCAGTGATCGTCACCCGTGAAGGGCGCAGCTTGAAAAGTACGCCCGAGCTCGCCGGCCTGCGCCTGGCGATGGTCGATCACTACCTgccggcc                                                                  >  5:139986/1‑149 (MQ=255)                                                                                            gCCCAGCTAAGCCTCAGCACCCCCTATGCCGACGACCTGCCAGTGATCGTCACCCGTGAAGGGCGCAGCTTGAAAAGTACGCCCGAGCTCGCCGGCCTGCGCCTGGCGATGGTCGATCACTACCTGCCGGCCGTCAGCGTTCGCACACt                                                 >  3:171294/1‑149 (MQ=255)                                                                                              ccAGCTAAGCCTCAGCACCCCCTATGCCGACGACCTGCCAGTGATCGTCACCCGTGAAGGGCGCAGCTTGAAAAGTACGCCCGAGCTCGCCGGCCTGCGCCTGGCGATCGTCGATCACTACCTGCCGGCCGTCAGCGTACGcaacctg                                                >  8:131061/1‑143 (MQ=255)                                                                                              ccAGCTAAGCCTCAGCACCCCCTATGCCGACGACCTGCCAGTGATCGTCACCCGTGAAGGGCGCAGCTTGAAAAGTACGCCCGAGCTCGCCGGCCTCCGCCTGGCGATGCTCGATCACTACCTCCCGGCCGTCAGCGTTCGcaccaag                                                >  8:127128/1‑144 (MQ=255)                                                                                                 gCTAAGCCTCAGCACCCCCTATGCCGACGACCTGCCAGTGATCGTCACCCGTGAAGGGCGCAGCTTGAAAAGTACGCCCGAGCTCGCCGGCCTGCGCCTGGCGATGGTCGATCACTACCTGCCGGCCGTCAGCGTTCGCACACTGTAcc                                            >  7:146445/1‑149 (MQ=255)                                                                                                      gCCTCAGCACCCCCTATGCCGACGACCTGCCAGTGATCGTCACCCGTGAAGTGCGCAGCTTGAAAAGTACGCCCGAGCTCGCCGGCCTGCGCCTGGCGATGGTCGATCACTACCTGCCGGCCGTCAGCGTTCGCACACTGTACCCCAAg                                       <  7:127128/149‑1 (MQ=255)                                                                                                      gCCTCAGCACCCCCTATGCCGACGACCTGCCAGTGATCGTCACCCGTGAAGGGCGCAGCTTGAAAAGTACGCCCGAGCTCGCCGGCCTGCGCCTGGCGATGGTCGATCACTACCTGCCGGCCGTCAGCGTTCGCACACTGTACCCCAAg                                       <  7:131061/149‑1 (MQ=255)                                                                                                        cTCAGCACCCCCTATGCCGACGACCTGCCAGTGATCGTCACCCGTGAAGGGCGCAGCTTGAAAAGTACGCCCGAGCTCGCCGGCCTGCGCCTGGCGATGGTCGATCACTACCTGCCGGCCGTCAGCGTTCGCACACTGTACCCCAAGgc                                     >  1:284374/1‑149 (MQ=255)                                                                                                                ccccTATGCCGACGACCTGCCAGTGATCGTCACCCGTGAAGGGCGCAGCTTGAAAAGTACGCCCGAGCTCGCCGGCCTGCGCCTGGCGATGGTCGATCACTACCTGCCGGCCGTCAGCGTTCGCACACTGTACCCCAAg                                       <  1:215305/139‑1 (MQ=255)                                                                                                                ccccTATGCCGACGACCTGCCAGTGATCGTCACCCGTGAAGGGCGCAGCTTGAAAAGTACGCCCGAGCTCGCCGGCCTGCGCCTGGCGATGGTCGATCACTACCTGCCGGCCGTCAGCGTTCGCACACTGTACCCCAAg                                       >  2:215305/1‑139 (MQ=255)                                                                                                                ccccTATGCCGACGACCTGCCAGTGATCGTCACCCGTGAAGGGCGCAGCTTGAAAAGTACGCCCGAGCTCGCCGGCCTGCGCCTGGCGATGGTCGATCACTACCTGCCGGCCGTCAGCGTTCGCACACTGTACCCCAAGGCGCAACt                               >  2:103577/1‑147 (MQ=255)                                                                                                                ccccTATGCCGACGACCTGCCAGTGATCGTCACCCGTGAAGGGCGCAGCTTGAAAAGTACGCCCGAGCTCGCCGGCCTGCGCCTGGCGATGGTCGATCACTACCTGCCGGCCGTCAGCGTTCGCACACTGTACCCCAAGGCGCAACTGa                             <  6:153202/149‑1 (MQ=255)                                                                                                                ccccTATGCCGACGACCTGCCAGTGATCGTCACCCGTGAAGGGCGCAGCTTGAAAAGTACGCCCGAGCTCGCCGGCCTGCGCCTGGCGATGGTCGATCACTACCTGCCGGCCGTCAGCGTTCGCACACTGTACCCCAAGGCGCAACTGa                             >  3:147821/1‑149 (MQ=255)                                                                                                                ccccTATGCCGACGACCTGCCAGTGATCGTCACCCGTGAAGGGCGCAGCTTGAAAAGTACGCCCGAGCTCGCCGGCCTGCGCCTGGCGATGGTCGATCACTACCTGCCGGCCGTCAGCGTTCGCACACTGTACCCCAAGGCGCAACTGa                             >  8:148859/1‑149 (MQ=255)                                                                                                                            cgacCTGCCAGTGATCGTCACCCGTGAAGGGCTCAGCTTGAAAAGTACGCCCGAGCTCGCCGGCCTGCGCCTGGCGATGGTCGATCACTACCTGCCGGCCGTCAGCGTTCGCACACTGTACCCCAAGGCGCAACTGAGCCTGTACCGCt                 <  4:147821/149‑1 (MQ=255)                                                                                                                             gacCTGCCAGTGATCGTCACCCGTGAAGGGCGCAGCTTGAAAAGTACGCCCGAGCTCGCCGGCCTGCGCCTGGCGATGGTCGATCACTACCTGCCGGCCGTCAGCGTTCGCACACTGTACCCCAAGGCGCAACTGAGCCTGTACCGCTc                >  5:294196/1‑149 (MQ=255)                                                                                                                              acCTGGCAGTGATCGTCACCCGTGAAGGGCGCATCTTGAAAAGTACGCCCGATCTCGCCGGCCTGCGCCTGGCGATTGTCGATCACTACCTGCCGGCCGTCAGCGTTCGCACACTGTACCCCAAGGCGCAACTGAGCCTGTACCGCTCg               <  5:111946/149‑1 (MQ=255)                                                                                                                               ccTGCCAGTGATCGTCACCCGTGAAGGGCGCAGCTTGAAAAGTACGCCCGAGCTCGCCGGCCTGCGCCTGGCGATGGTCGATCACTACCTGCCGGCCGTCAGCGTTCGCACACTGTACCCCAAGGCGCAACTGAGCCTGTACCGCTCGa              >  8:139855/1‑149 (MQ=255)                                                                                                                                cTGCCAGTGATCGTCACCCGTGAAGGGCGCAGCTTGAAAAGTACGCCCGAGCTCGCCGGCCTGCGCCTGGCGATGGTcgatcactggcaggtcgtcggcatagggggtgctgaggcttagctgggcgtccgccgcctcgaaggcgttg              <  6:248259‑M2/148‑72 (MQ=255)                                                                                                                                cTGCCAGTGATCGTCACCCGTGAAGGGCGCAGCTTGAAAAGTACGCCCGAGCTCGCCGGCCTGCGCCTGGCGATGGTcgatcactggcaggtcgtcggcatagggggtgctgaggcttagctgggcgtccgccgcctcgaaggcgttg              <  8:76861‑M2/148‑72 (MQ=255)                                                                                                                                   ccAGTGATCGTCACCCGTGAAGGGCGCAGCTTGAAAAGTACGCCCGAGCTCGCCGGCCTGCGCCTGGCGATGGTCGATCACTACCTGCCGGCCGTCAGCGTTCGCACACTGTACCCCAAGGCGCAACTGAGCCTGTACCGCTCGAcc            <  8:18413/147‑1 (MQ=255)                                                                                                                                     aGTGATCGaccatcgccaggcgcaggccggcgagctcgggcgtacttttcaagctgcgcccttcacgggtgacgatcactggcaggtcgtcggcatagggggtgctgaggcttagctgggcgtccgccgcctcgaaggcgttgga            <  1:110197‑M1/145‑138 (MQ=255)                                                                                                                                     aGTGATCGaccatcgccaggcgcaggccggcgagctcgggcgtacttttcaagctgcgcccttcacgggtgacgatcactggcaggtcgtcggcatagggggtgctgaggcttagctgggcgtccgccgcctcgaaggcgttgga            >  2:110197‑M1/1‑8 (MQ=255)                                                                                                                                      gTGATCGTCACCCGTGAAGGGCGCAGCTTGAAAAGTACGCCCGAGCTCGCCGGCCTGCGCCTGGCGATGGTCGATCACTACCTGCCGGCCGTCAGCGTTCGCACACTGTACCCCAAGGCGCAACTGAGCCTGTACCGCTCGACCCTGGc       >  5:249286/1‑149 (MQ=255)                                                                                                                                       tGATCGTCACCCGTGAAGGGCGCAGCTTGAAAAGTACGCCCGAGCTCGCCGGCCTGCGCCTGGCGATGGTcgatcactggcaggtcgtcggcatagggggtgctgaggcttagctgggcgtccgccgcctcgaaggcgttggagctacc      <  2:276728‑M2/149‑80 (MQ=255)                                                                                                                                       tGATCGTCACCCGTGAAGGGCGCAGCTTGAAAAGTACGCCCGAGCTCGCCGGCCTGCGCCTGGCGATGGTCGATCACTACCTGCCGGCCGTCAGCGTTCGCACACTGTACCCCAAGGCGCAACTGAGCCTGTACCGCTCGAcccggcca      <  4:171294/149‑6 (MQ=255)                                                                                                                                         aTCGTCACCCGTGAAGGGCGCAGCTTGAAAAGTACGCCCGAGCTCGCCGGCCTGCGCCTGGCGATGGTCGATCACTACCTGCCGGCCGTCAGCGTTCGCACACTGTACCCCAAGGCGCAACTGAGCCTGTACCGCTCGACCCTGGCCgg    >  4:756/1‑149 (MQ=255)                                                                                                                                         aTCGTCACCCGTGAAGGGCGCAGCTTGAAAAGTACGCCCGAGCTCGCCGGCCTGCGCCTGGCGATGGTCGATCACTACCTGCCGGCCGTCAGCGTTCGCACACTGTACCCCAAGGCGCAACTGAGCCTGTACCGCTCGACCCTGGCCgg    <  7:148859/149‑1 (MQ=255)                                                                                                                                            gTCACCCGTGAAGGGCGCAGCTTGAAAAGTACGCCCGAGCTCGCCGGCCTGCGCCTGGCGATGGTCGATCACTACCTGCCGGCCGTCAGCGTTCGCACACTGTACCCCAAGGCGCAACTGAGCCTGTACCGCTCGACCCTGGCCGGGc  <  6:209535/148‑1 (MQ=255)                                                                                                                                            |                                                                                                                                                    TCGTTTTGACAGCCGTCACGAGGCCATCACTGCCCTGCGTGATGGCCGTATCGACTTGTTGGGTAGCTCCAACGCCTTCGAGGCGGCGGACGCCCAGCTAAGCCTCAGCACCCCCTATGCCGACGACCTGCCAGTGATCGTCACCCGTGAAGGGCGCAGCTTGAAAAGTACGCCCGAGCTCGCCGGCCTGCGCCTGGCGATGGTCGATCACTACCTGCCGGCCGTCAGCGTTCGCACACTGTACCCCAAGGCGCAACTGAGCCTGTACCGCTCGACCCTGGCCGGGC  >  NC_002947/3861374‑3861660

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.