New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 4348206 = | NA (NA) | 4 (0.090) | 4/248 | NT | NA | coding (430/1422 nt) | PP_3820 | group II intron‑encoding maturase |
? | NC_002947 | 4392679 = | NA (NA) | coding (336/1422 nt) | PP_3868 | group II intron‑encoding maturase |
AGATCGAGTTCCACGCACCAGCGGTGTCCCGCTGTCACATGAGCACGAGCCATCTCGATGGCTTGATGCGTACTTCTGCCCGGACGAAAACCATAGCTGTAGTCCGAGAACAGTGGGTCGAAGATAGGTGTGAGCTGCTGCTGCAGTGCTTGCTGG > NC_002947/4348064‑4348219 | aGATCGAGTTCCACGCACCAGCGGTGTCCCGCTGTCACATGAGCACGAGCCATCTCGATGGCTTGATGCGTACTTCTGCCCGGACGAAAACCATAGCTGTAGTCCGAGAACAGTGGGTCGAAGATAGGTGTGAGCTGCTGCTGCAGtgc > 8:204158/1‑149 (MQ=32) aGATCGAGTTCCACGCACCAGCGGTGTCCCGCTGTCACATGAGCACGAGCCATCTCGATGGATTGATGCGTACTTCTGCCCGGACGAAAACCATAGCTGTAGTCCGAGAACAGTGGGTCGAAGATAGGTGTGAGCTGCTGCTGCAGtgc < 6:208015/149‑1 (MQ=17) gATCGAGTTCCACGCACCAGCGGTGTCCCGCTGTCACATGAGCACGAGCCATCTCGATGGCTTGATGCGTACTTCTGCCCGGACGAAAACCATAGCTGTAGTCCGAGAACAGTGGGTCGAAGATAGGTGTGAGCTGCTGCTGCAGtgct > 4:105279/1‑149 (MQ=32) tCGAGTTCCACGCACCAGCGGTGTCCCGCTGTCACATGAGCACGAGCCATCTCGATGGCTTGATGCGTACTTCTGCCCGGACGAAAACCATAGCTGTAGTCCGAGAACAGTGGGTCGAAGATAGGTGTGAGCTGCTGCTGCAGtgcttg < 7:21168/149‑1 (MQ=32) aGTTCCACGCACCAGCGGTGTCCCGCTGTCACATGAGCACGAGCCATCTCGATGGCTTGATGCGTACTTCTGCCCGGACGAAAACCATAGCTGTAGTCCGAGAACAGTGGGTCGAAGATAGGTGTGAGCTGCTGCTGCAGTCCTTGCTg > 4:248772/1‑149 (MQ=14) gTTCCACGCACCAGCGGTGTCCCGCTGTCACATGAGCACGAGCCATCTCGATGGCTTGATGCGTACTTCTGCCCGGACGAAAACCATAGCTGTAGTCCGAGAACAGTGGGTCGAAGATAGGTGTGAGCTGCTGCTGCAGTGCTTGCTgg < 6:78897/149‑1 (MQ=11) | AGATCGAGTTCCACGCACCAGCGGTGTCCCGCTGTCACATGAGCACGAGCCATCTCGATGGCTTGATGCGTACTTCTGCCCGGACGAAAACCATAGCTGTAGTCCGAGAACAGTGGGTCGAAGATAGGTGTGAGCTGCTGCTGCAGTGCTTGCTGG > NC_002947/4348064‑4348219 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |