New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4362772	43 (0.880)	3 (0.060)	3/254	NT	6.8%	intergenic (‑293/‑143)	PP_5634/adhP	hypothetical protein/alcohol dehydrogenase
	?	NC_002947	= 4362806	41 (0.860)					intergenic (‑327/‑109)	PP_5634/adhP	hypothetical protein/alcohol dehydrogenase

TTTTTTATGACCCTGCGCACTTCGTTGCAGATGATGACAGCCTCATGACCTGACCTTCACGAAATGTCGACATCCGGATGGGCACACTGGCCCTGCTCCGTATGTTCTTGCAGCCCGCCGCATCCTTGCCGCGGGCTTTTCTTTTTTCCGCAAAGGCCAGCCAGGCATACGCAGGAATTTTGTGGAAGCGCCCACCTTGACCATGACCTGAAGCAGTTTTGCCTGGGCCGGCAAGGTCTATGCTATCCCGACGATCACCCAAGCTCACATCGGATAGACACGGAGGCTCTCATG  >  NC_002947/4362624‑4362917                                                                                                                                                     |                                                                                                                                                  ttttttATGACCCTGCGCACTTCGTTGCAGATGATGACAGCCTCATGACCTGACCTTCACGAAATGTCGACATCCGGATGGGCACACTGGCCCTGCTCCGTATGTTCTTGCAGCCCGCCGCATCCTTGCCGCGGGCTTTTCTTTTTTCC                                                                                                                                                   >  4:50257‑M1/1‑149 (MQ=255)   ttttATGACCCTGCGCACTTCGTTGCAGATGATGACAGCCTCATGACCTGACCTTCACGAAATGTCGACATCCGGATGGGCACACTGGCCCTGCTCCGTATGTTCTTGCAGCCCGCCGCATCCTTGCCGCGGGCTTTTCTTTTTTCCg                                                                                                                                                  <  1:174790/148‑1 (MQ=255)       aTGACCCTGCGCACTTCGTTGCAGATGATGACAGCCTCATGACCTGACCTTCACGAAATGTCGACATCCGGATGGGCACACTGGCCCTGCTCCGTATGTTATTGCAGCCCGCCGCATCCTTGCCGCGGGCTTTTCTTTTTTCCGCAAAg                                                                                                                                             >  2:113476/1‑149 (MQ=255)                cgcACTTCGTTGCAGATGATGACAGCCTCATGACCTGACCTTCACGAAATGTCGACATCCGGATGGGCACACTGGCCCTGCTCCGTATGTTCTTGCAGCCCGCCGCATCCTTGCCGCGGGCTTTTCTTTTTTCCGCAAAGGccagccag                                                                                                                                    <  4:127996/149‑1 (MQ=255)                   aCTTCGTTGCAGATGATGACAGCCTCATGACCTGACCTTCACGAAATGTCGACATCCGGATGGGCACACTGGCCCTGCTCCGTATGTTCTTGCAGCCCGCCGCATCCTTGCCGCGGGCTTTTCTTTTTTCCGCAAAGGCCAGCCAGGCa                                                                                                                                 >  2:61734/1‑149 (MQ=255)                                   tgaCAGCCTCATGACCTGACCTTCACGAAATGTCGACATCCGGATGGGCACACTGGCCCTGCTCCGTATGTTCTTGCAGCCCGCCGCATCCTTGCCGCGGGCTTTTCTTTTTTCCGCAAAGGCCAGCCAGGCATACGCAGGAATTTtgt                                                                                                                 <  2:24188/149‑1 (MQ=255)                                   tgaCAGCCTCATGACCTGACCTTCACGAAATGTCGACATCCGGATGGGCACACTGGCCCTGCTCCGTATGTTCTTGCAGCCCGCCGCATCCTTGCCGCGGGCTTTTCTTTTTTCCGCAAAGGCCAGCCAGGCATACGCAGGAATTTtg                                                                                                                  <  3:242345/148‑1 (MQ=255)                                      cAGCCTCATGACCTGACCTTCACGAAATGTCGACATCCGGATGGGCACACTGGCCCTGCTCCGTATGTTCTTGCAGCCCGCCGCATCCTTGCCGCGGGCTTTTCTTTTTTCCGCAAAGgcca                                                                                                                                         >  6:62343/1‑122 (MQ=255)                                      cAGCCTCATGACCTGACCTTCACGAAATGTCGACATCCGGATGGGCACACTGGCCCTGCTCCGTATGTTCTTGCAGCCCGCCGCATCCTTGCCGCGGGCTTTTCTTTTTTCCGCAAAGgcca                                                                                                                                         <  5:62343/122‑1 (MQ=255)                                       aGCCTCATGACCTGACCTTCACGAAATGTCGACATCCGGATGGGCACACTGGCCCTGCTCCGTATGTTCTTGCAGCCCGCCGCATCCTTGCCGCGGGCTTTTCTTTTTTCCGCAAAGGCCAGCCAGGCATACGCAGGAATTTTGTggaa                                                                                                             >  3:50257‑M2/1‑145 (MQ=255)                                         ccTCATGACCTGACCTTCACGAAAAGTCGACATCCCGATGGGCACAATGGCCCTGCTCCCTATGTACTTGCAGCCCGCCGCATCCTTGCCGACGGCTTTTAGTTTTAACGCAAAGGCCAGCCAGGCATAAGCAGGAATTTTGTGGAAgc                                                                                                           >  7:133723/1‑149 (MQ=255)                                              tgacctgaccTTCACGAAATGTCGACATCCGGATGGGCACACTGGCCCTGCTCCGTATGTTCTTGCAGCCCGCCGCATCCTTGCCGCGGGCTTTTCTTTTTTCCacaaaattcctgcgtatgcctggctggcctttgcggaaaaaagaa                                                                                                      <  3:111552‑M1/149‑46 (MQ=255)                                                acctgacctTCACGAAATGTCGACATCCGGATGGGCACACTGGCCCTGCTCCGTATGTTCTTGCAGCCCGCCGCATCCTTGCCGCGGGCTTTTCTTTTTTCCGCAAAGGCCAGCCAGGCATACGCAGGAATTTTGTGGAAGCGCCCAcc                                                                                                    <  1:56388/149‑1 (MQ=255)                                                 cctgacctTCACGAAATGTCGACATCCGGATGGGCACACTGGCCCTGCTCCGTATGTTCTTGCAGCCCGCCGCATCCTTGCCGCGGGCTTTTCTTCTTTCCGCAAAGGccagccag                                                                                                                                    <  7:191273/116‑1 (MQ=255)                                                 cctgacctTCACGAAATGTCGACATCCGGATGGGCACACTGGCCCTGCTCCGTATGTTCTTGCAGCCCGCCGCATCCTTGCCGCGGGCTTTTCTTATTTCCGCAAAGGccagccag                                                                                                                                    >  8:191273/1‑116 (MQ=255)                                                  ctgacctTCACGAAATGTCGACATCCGGATGGGCACACTGGCCCTGCTCCGTATGTTCTTGCAGCCCGCCGCATCCTTGCCGCGGGCTTTTCTTTTTTCCGCAAAGGCCAGCCAGGCATACGCAAGAATTTTGTGGAAGCGCCCACCtt                                                                                                  <  4:146154/149‑1 (MQ=255)                                                    gacctTCACGAAATGTCGACATCCGGATGGGCACACTGGCCCTGCTCCGTATGTTCTTGCAGCCCGCCGCATCCTTGCCGCGGGCTTTTCTTTTTTCCGCAAAGGCCAGCCAGGCATACGCAGGAATTTTGTGGAAGCGCCCACCTTGa                                                                                                >  5:228366/1‑149 (MQ=255)                                                     acctTCACGAAATGTCGACATCCGGATGGGCACACTGGCCCTGCTCCGTATGTTCTTGCAGCCCGCCGCATCCTTGCCGCGGGCTTTTCTTTTTTCCGCAAAg                                                                                                                                             >  2:180660/1‑103 (MQ=255)                                                     acctTCACGAAATGTCGACATCCGGATGGGCACACTGGCCCTGCTCCGTATGTTCTTGCAGCCCGCCGCATCCTTGCCGCGGGCTTTTCTTTTTTCCGCAAAg                                                                                                                                             <  1:180660/103‑1 (MQ=255)                                                        ttCACGAAATGTCGACATCCGGATGGGCACACTGGCCCTGCTCCGTATGTTCTTGCAGCCCGCCGCATCCTTGCCGCGGGCTTTTCTTTTTTCCGCAAAGGCCAGCCAGGCATACGCAGGAATTTTGTGGAAGCGCCCACCt                                                                                                   <  6:201310/142‑1 (MQ=255)                                                        ttCACGAAATGTCGACATCCGGATGGGCACACTGGCCCTGCTCCGTATGTTCTTGCAGCCCGCCGCATCCTTGCCGCGGGCTTTTCTTTTTTCCGCAAAGGCCAGCCAGGCATACGCAGGAATTTTGTGGAAGCGCCCACCt                                                                                                   >  5:201310/1‑142 (MQ=255)                                                        ttCACGAAATGTCGACATCCGGATGGGCACACTGGCCCTGCTCCGTATGTTCTTGCAGCCCGCCGCATCCTTGCCGCGGGCTTTTCTTTTTTCCGCAAAGGCCAGCCAGGCATACGCAGGAATTTTGTGGAAGCGCCCACCTTGACCAt                                                                                            >  2:55370/1‑149 (MQ=255)                                                         tCACGAAATGTCGACATCCGGATGGGCACACTGGCCCTGCTCCGTATGTTCTTGCAGCCCGCCGCATCCTTGCCGCGGGCTTTTCTTTTTTCCGCAAAGGCCAGCCAGGCATACGCAGGAATTTTGTGGAAGCGCCCACCTTGACCAt                                                                                            >  3:89841/1‑148 (MQ=255)                                                                aTGTCGACATCCGGATGGGCACACTGGCCCTGCTCCGTATGTTCTTGCAGCCCGCCGCATCCTTGCCGCGGGCTTTTCTTTTTTCCGCAAAGGCCAGCCAGGCATACGCAGGAATTTTGTGGAAGCGCCCACCTTGACCATGACCTGaa                                                                                    <  4:89841/149‑1 (MQ=255)                                                                   tCGACATCCGGATGGGCACACTGGCCCTGCTCCGTATGTTCTTGCAGCCCGCCGCATCCTTGCCGCGGGCTTTTCTTTTTTCCGCAAAGGCCAGCCAGGCATACGCAGGAATTTTGTGGAAGCGCCCACCTTGACCATGACCTGAAg                                                                                   >  1:235799/1‑147 (MQ=255)                                                                        aTCCGGCTGGGCACTCTGGCCCTGCTCCGTATGTTCTTGCTGCCCGGCGCATCCTTGCCGCGGGCTTTTCTTTTTTCCGAAAAGGCCAGCGAGGCATACGGAGGAATTTTGTGGAAGCGCCCACCTTGTCCATGACCTGAAGCAGtttt                                                                            <  8:133723/149‑1 (MQ=255)                                                                           cGGATGGGCACACTGGCCCTGCTCCGTATGTTCTTGCAGCCCGCCGCATCCTTGCCGCGGGCTTTTCTTTTTTCCGCAAAGGCCAGCCAGGCATACGCAGGAATTTTGTGGAAGCGCCCACCTTGACCATGACCTGAAGCAGTTTTGc                                                                          <  7:72373/148‑1 (MQ=255)                                                                             gATGGGCACACTGGCCCTGCTCCGTATGTTCTTGCAGCCCGCCGCATCCTTGCCGCGGGCTTTTCTTTTTTCCGCAAAGGCCAGCCAGGCATACGCAGGAATTTTGTg                                                                                                                <  4:259274‑M2/108‑2 (MQ=255)                                                                             gATGGGCACACTGGCCCTGCTCCGTATGTTCTTGCAGCCCGCCGCATCCTTGCCGCGGGCTTTTCTTTTTTCCGCAAAGGCCAGCCAGGCATACGCAGGAATTTTGTg                                                                                                                >  3:259274‑M2/1‑107 (MQ=255)                                                                                  gCACACTGGCCCTGCTCCGTATGTTCTTGCAGCCCGCCGCATCCTTGCCGCGGGCTTTTCTTTTTTCCGCAAAGGCCAGCCAGGCATACGCAGGAATTTTGTGGAAGCGCCCACCTTGACCATGACCTGAAGCAGTTTTGCCTGGGCCg                                                                  >  2:191648/1‑149 (MQ=255)                                                                                   cacaCTGGCCCTGCTCCGTATGTTCTTGCAGCCCGCCGCATCCTTGCCGCGGGCTTTTCTTTTTTCCGCAAAGGCCAGCCAGGCATACGCAGGAATTTTGTGGAAGCGCCCACCTTGACCATGACCTGAAGCAGTTTTGCCTGGGCCgg                                                                 >  6:306328/1‑149 (MQ=255)                                                                                        tGGCCCTGCTCCGTATGTTCTTGCAGCCCGCCGCATCCTTGCCGCGGGCTTTTCTTTTTTCCGCAAAGGCCAGCCAGGCATACGCAGGAATTTTGTGGAAGCGCCCACCTTGa                                                                                                <  8:19032/113‑1 (MQ=255)                                                                                          gCCCTGCTCCGTATGTTCTTGCAGCCCGCCGCATCCTTGCCGCGGGCTTTTCTTTTTTCCGCAAAGGCCAGCCAGGCATACGCAGGAATTTTGTGGAAGCGCCCACCTTGACCATGACCTGaa                                                                                    >  6:280609/1‑123 (MQ=255)                                                                                          gCCCTGCTCCGTATGTTCTTGCAGCCCGCCGCATCCTTGCCGCGGGCTTTTCTTTTTTCCGCAAAGGCCAGCCAGGCATACGCAGGAATTTTGTGGAAGCGCCCACCTTGACCATGACCTGaa                                                                                    <  5:280609/123‑1 (MQ=255)                                                                                            ccTGCTCCGTATGTTCTTGCAGCCCGCCGCATCCTTGCCGCGCGCTTATCTTTTTTCCGCAAAGGCCAGCCAGGCATACGCAGGAATTTTGTGGAAGCGCCCAACATGACCATGACCTGAAGCAGTTTTGACTGGGCACGCAAGGTCTa                                                        >  4:1111/1‑149 (MQ=255)                                                                                             cTGCTCCGTATGTTCTTGCAGCCCGCCGCATCCTTGCCGCGGGCTTTTCTTTTTTCCGCAAAGGCCAGCCAGGCATACTCAGGAATTTTGTGGAAGCGCCCACCTTGACCATGACCTGAAGCAGTTTTGCCTGGGCCGGCAAGGTCTAt                                                       <  5:306328/149‑1 (MQ=255)                                                                                               gCTCCGTATGTTCTTGCAGCCCGCCGCATCCTTGCCGCGGGCTTTTCTTTTTTCCGCAAAGGCCAGCCAGGCATACGCAGGAATTTTGTGGAAGCGCCCACCTTGACCATGACCTGAAGCAGTTTTGCCTGGGCCGGCAAGGTCTATGc                                                     >  8:25822/1‑149 (MQ=255)                                                                                                              gCAGCCCGCCGCATCCTTGCCGCGGGCTTTTCTTTTTTCCGCAAAGGCCAGCCAGGCATACGCAGGAATTTTGTGGAAGCGCCCACCTTGACCATGACCTGAAGCAGTTTTGCCTGGGCCGGCAAGGTCTATGCTATCCCGACGATCa                                       <  7:25822/148‑1 (MQ=255)                                                                                                                aGCCCGCCGCATCCTTGCCGCGGGCTTTTCTTTTTTCCGCAAAGGCCAGCCAGGCATACGCAGGAATTTTGTGGAAGCGCCCACCTTGACCATGACCTGAAGCAGTTTTGCCTGGGCCGGCAAGGTCTATGCTATCCCGACGATCAcc                                     >  4:79436/1‑148 (MQ=255)                                                                                                                  cccGCCGCATCCTTGCCGCGGGCTTTTCTTTTTTCCacaaaattcctgcgtatgcctggctggcctttgcggaaaaaag                                                                                                        >  7:39772‑M1/1‑36 (MQ=255)                                                                                                                  cccGCCGCATCCTTGCCGCGGGCTTTTCTTTTTTCCacaaaattcctgcgtatgcctggctggcctttgcggaaaaaag                                                                                                        <  8:39772‑M1/79‑44 (MQ=255)                                                                                                                   ccgccgCATCCTTGCCGCGGGCTTTTCTTTTTTCCGCAAAGGCCAGCCAGGCATACGCAGGAATTTTGTGGAAGCGCCCGCCTTGACCATGACCTGAAGCAGTTTTGCCTGGGCCGGCAAGGTCTATGCTATCCCGACGATCACCCAAg                                 <  1:113476/149‑1 (MQ=255)                                                                                                                           tCCTTGCCGCGGGCTTTTCTTTTTTCCGCAAAGGCCAGCCAGGCATACGCAGGAATTTTGTGGAAGCGCCCACCTTGACCATGACCTGAAGCAGTTTTGCCTGGGCCGGCAAGGTCTATGCTATCCCGACGATCACCCAAGCTCACATc                         <  2:235799/149‑1 (MQ=255)                                                                                                                            ccTTGCCGCGGGCTTTTCTTTTTTCCGCAAAGGCCAGCCAGGCATACGCAGGAATTTTGTGGAAGCGCCCACCTTGACCATGACCTGAAGCAGTTTTGCCTGGGCCGGCAAGGTCTATGCTATCCCGACGATCAc                                      >  7:97906/1‑135 (MQ=255)                                                                                                                            ccTTGCCGCGGGCTTTTCTTTTTTCCGCAAAGGCCAGCCAGGCATACGCAGGAATTTTGTGGAAGCGCCCACCTTGACCATGACCTGAAGCAGTTTTGCCTGGGCCGGCAAGGTCTATGCTATCCCGACGATCAc                                      <  8:97906/135‑1 (MQ=255)                                                                                                                             cTTGCCGCGGGCTTTTCTTTTTTCCGCAAAGGCCAGCCAGGCATACGCAGGAATTTTGTGGAAGCGCCCACCTTGACCATGACCTGAAGCAGTTTTGCCTGGGCCGGCAAGGTCTATGCTATCCCGACGATCACCCAAGCTCACATCgg                       <  6:228366/149‑1 (MQ=255)                                                                                                                                   gcgGGCTTTTCTTTTTTCCGCAAAGGCCAGCCAGGCATACGCAGGAATTTTGTGGAAGCGCCCACCTTGACCATGACCTGAAGCAGTTTTGCCTGGGCCGGCAAGGTCTATGCTATCCCGACGATCACCCAAGCTc                              <  4:262996/136‑1 (MQ=255)                                                                                                                                   gcgGGCTTTTCTTTTTTCCGCAAAGGCCAGCCAGGCATACGCAGGAATTTTGTGGAAGCGCCCACCTTGACCATGACCTGAAGCAGTTTTGCCTGGGCCGGCAAGGTCTATGCTATCCCGACGATCACCCAAGCTc                              >  3:262996/1‑136 (MQ=255)                                                                                                                                      ggCTTTTCTTTTTTCCGCAAAGGCCAGCCAGGCATACGCAGGAATTTTGTGGAAGCGCCCACCTTGACCATGACCTGAAGCAGTTTTGCCTGGGCCGGCAAGGTCTATGCTATCCCGACGATCACCCAAGCTCACATCGGATAGACACg              >  6:232791/1‑149 (MQ=255)                                                                                                                                           ttcttttTTCCGCAAAGGCCAGCCAGGCATACGCAGGAATTTTGTggaaaaaagaaaagcccgcggcaaggatgcggcgggctgcaagaacatacggagcagggccagtgtgcccatccggatgtcgacatttcgtgaaggtcaggtca         <  3:111552‑M2/149‑105 (MQ=255)                                                                                                                                             cttttTTCCGCAAAGGCCAGCCAGGCATACGCAGGAATTTTGTggaaaaaagaaaagcccgcggcaaggatgcggcggg                                                                             >  7:39772‑M2/1‑43 (MQ=255)                                                                                                                                             cttttTTCCGCAAAGGCCAGCCAGGCATACGCAGGAATTTTGTggaaaaaagaaaagcccgcggcaaggatgcggcggg                                                                             <  8:39772‑M2/79‑37 (MQ=255)                                                                                                                                              ttttttCCGCAAAGGCCAGCCAGGCATACGCAGGAATTTTGTGGAAGCGCCCACCTTGACCATGACCTGAAGCAGTTTTGCCTGGGCCGGCAAGGTCTATGCTATCCCGACGATCACCCAAGCTCACATCGGATAGACACGGAGGctct      >  2:130563/1‑149 (MQ=255)                                                                                                                                               tttttCCGCAAAGGCCAGCCAGGCATACGCAGGAATTTTGTGGAAGCGCCCACCTTGACCATGACCTGAAGCAGTTTTGCCTGGGCCGGCAAGGTCTATGCTATCCCGACGATCACCCAAGCTCACATCGGATAGACACGGAGGctct      >  2:216730/1‑148 (MQ=255)                                                                                                                                                 tttCCGCAAAGGCCAGCCAGGCATACGCAGGAATTTTGTGGAAGCGCCCACCTTGACCATGACCTGAAGCAGTTTTGCCTGGGCCGGCAAGGTCTATGCTATCCCGACGATCACCCAAGCTCACATCGGATAGACACGGAg           <  4:275514/141‑1 (MQ=255)                                                                                                                                                 tttCCGCAAAGGCCAGCCAGGCATACGCAGGAATTTTGTGGAAGCGCCCACCTTGACCATGACCTGAAGCAGTTTTGCCTGGGCCGGCAAGGTCTATGCTATCCCGACGATCACCCAAGCTCACATCGGATAGACACGGAg           >  3:275514/1‑141 (MQ=255)                                                                                                                                                 tttCCGCAAAGGCCAGCCAGGCATACGCAGGAATTTTGTGGAAGCGCCCACCTTGACCATGACCTGAAGCAGTTTTGCCTGGGCCGGCAAGGTCTATGCTATCCCGACGATCACCCAAGCTCACATCGGATAGACACGGAGGCTCTCa    <  1:61734/148‑1 (MQ=255)                                                                                                                                                  ttCCacaaaattcctgcgtatgcctggctggcctttgcggaaaaaagaaaagcccgcggcaaggatgcggcgggctgcaagaacatacggagcagggccagtgtgcccatccggatgtcgacatttcgtgaaggtcaggtcatgaggct  >  3:50257‑M1/1‑4 (MQ=255)                                                                                                                                                     cacaaaattcctgcgtatgcctggctggcctttgcggaaaaaagaaaagcccgcggcaaggatgcggcgggctgcaagaacatacggagcagggccagtgtgcccatc                                        <  4:259274‑M1/108‑108 (MQ=255)                                                                                                                                                     cacaaaattcctgcgtatgcctggctggcctttgcggaaaaaagaaaagcccgcggcaaggatgcggcgggctgcaagaacatacggagcagggccagtgtgcccatc                                        >  3:259274‑M1/1‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                  TTTTTTATGACCCTGCGCACTTCGTTGCAGATGATGACAGCCTCATGACCTGACCTTCACGAAATGTCGACATCCGGATGGGCACACTGGCCCTGCTCCGTATGTTCTTGCAGCCCGCCGCATCCTTGCCGCGGGCTTTTCTTTTTTCCGCAAAGGCCAGCCAGGCATACGCAGGAATTTTGTGGAAGCGCCCACCTTGACCATGACCTGAAGCAGTTTTGCCTGGGCCGGCAAGGTCTATGCTATCCCGACGATCACCCAAGCTCACATCGGATAGACACGGAGGCTCTCATG  >  NC_002947/4362624‑4362917

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.