New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5471251	50 (1.020)	4 (0.090)	3/248	NT	7.5%	coding (654/1890 nt)	mrdA‑II	transpeptidase
	?	NC_002947	= 5471303	51 (1.100)					coding (602/1890 nt)	mrdA‑II	transpeptidase

CACGCCGGCCTCCCAGGGCGGCTTCAGCGGCCTCCTGCAGCTTGATGTCCAGGCTCAGCACAATGTCCTTGCCCGGCTTCGGATCGGTGCGCTTGAGCACCCGCAACACCCGGCCACGGGCGTTGGTCTCGACTTCCTCGTAACCCACCTGACCGTGCAGGGC‑GGCCTCGTAGAAGCGCTCGATGCCGGTCTTGCCGATATGGTGGGTACCGCTGTAGTTCACCGGGTCGAGCGTTTTCAGCTCTTTCTCGTTGATCCGCCCGACATAACCCACCGAATGGGCGAAATGCGCAC  >  NC_002947/5471103‑5471396                                                                                                                                                     |                                                                                                                                                   accccgggCCCCCCCGGCCGGCTTCCGCGGCCGCCTGCCCCTTCAGGCCCCGCCCCAGCACAAGGGCCTGGCCCGCGTCCGTCAGGGTGCGCTTGAGCACCCGCAACACCCGGCCACGGGCGTTGGTCTCGACTTCCTCGTAACCCAcc                                                                                                                                                    <  1:246565/143‑1 (MQ=255)    gCCGGCCTCCCAGGGCGGCTTCAGCGGCCTCCTGCAGCTTGATGTCCAGGCTCAGCACAATGTCCTTGCCCGGCTTCGGATCGGTGCGCTTGAGCACCCGCAACACCCGGCCACGGGCGTTGGTCTCGACTTCCTCGTAACCCACCTGa                                                                                                                                                 <  4:297181/149‑1 (MQ=255)     ccGGCCTCCCAGGGCGGCTTCAGCGGCCTCCTGCAGCTTGATGTCCAGGCTCAGCACAATGTCCTTGCCCGGCTTCGGATCGGTGCGCTTGAGCACCCGCAACACCCGGCCACGGGCGTTGGTCTCGACTTCCTCGTAACCCACCTGAc                                                                                                                                                <  4:177919/149‑1 (MQ=255)      cGGCCTCCCAGGGCGGCTTCAGCGGCCTCCTGCAGCTTGATGTCCAGGCTCAGCACAATGTCCTTGCCCGGCTTCGGATCGGTGCGCTTGAGCACCCGCAACACCCGGCCACGGGCGTTGGTCTCGACTTCCTCGTAACCCACCTGAcc                                                                                                                                               <  2:187313/149‑1 (MQ=255)         ccTCCCAGGGCGGCTTCAGCGGCCTCCTGCAGCTTGATGTCCAGGCTCAGCACAATGTCCTTGCCCGGCTTCGGATCGGTGCGCTTGAGCACCCGCAACACCCGGCCACGGGCGTTGGTCTCGACTTCCTCGTAACCCACCTGACCGTg                                                                                                                                            >  1:159025/1‑149 (MQ=255)          cTCCCAGGGCGGCTTCAGCGGCCTCCTGCAGCTTGATGTCCAGGCTCAGCACAATGTCCTTGCCCGGCTTCGGATCGGTGCGCTTGAGCACCCGCAACACCCGGCCACGGGCGTTGGTCTCGACTTCCTCGTAACCCACCTGACCGTg                                                                                                                                            >  5:19982/1‑148 (MQ=255)            cccAGGGCGGCTTCAGCGGCCTCCTGCAGCTTGATGTCCAGGCTCAGCACAATGTCCTTGCCCGGCTTCGGATCGGTGCGCTTGAGCACCCGCAACACCCGGCCACGGGCGTTGGTCTCGACTTCCTCGTAACCCACCTGACCGTGCAg                                                                                                                                         >  5:124016/1‑149 (MQ=255)             ccAGGGCGGCTTCAGCGGCCTCCTGCAGCTTGATGTCCAGGCTCAGCACAATGTCCTTGCCCGGCTTCGGATCGGTGCGCTTGAGCACCCGCATCACCCGGCCACGGGCGTTGGTCTCGACTTCCTCGTAACCCACCTGACCGTGCAgg                                                                                                                                        >  7:37772/1‑149 (MQ=255)              cAGGGCGGCTTCAGCGGCCTCCTGCAGCTTGATGTCCAGGCTCAGCACAATGTCCTTGCCCGGCTTCGGATCGGTGCGCTTGAGCACCCGCAACACCCGGCCACGGGCGTTGGTCTCGACTTCCTCGTAACCCACCTGACCGTGCAggg                                                                                                                                       >  8:160513/1‑149 (MQ=255)                 ggcggcTTCAGCGGCCTCCTGCAGCTTGATGTCCAGGCTCAGCACAATGTCCTTGCCCGGCTTCGGATCGGTGCGCTTGAGCACCCGCAACACCCGGCCACGGGCGTTGGTCTCGACTTCCTCGTAACCCACCTGACCGTGCAGggc‑gg                                                                                                                                   <  6:124016/149‑1 (MQ=255)                     gcTTCAGCGGCCTCCTGCAGCTTGATGTCCAGGCTCAGCACAATGTCCTTGCCCGGCTTCGGATCGGTGCGCTTGAGCACCCGCAACACCCGGCCACGGGCGTTGGTCTCGACTTCCTCGTAACCCACCTGACCGTGCAGGGC‑GGCCTc                                                                                                                               <  2:271301/149‑1 (MQ=255)                       ttCAGCGGCCTCCTGCAGCTTGATGTCCAGGCTCAGCACAATGTCCTTGCCCGGCTTCGGATCGGTGCGCTTGAGCACCCGCAACACCCGGCCACGGGCGTTGGTCTCGACTTCCTCGTAACCCACCTGACCGTGCAGGGC‑GGCCTCg                                                                                                                              >  7:93953/1‑148 (MQ=255)                                ctcctGCAGCTTGATGTCCAGGCTCAGCACAATGTCCTTGCCCGGCTTCGGATCGGTGCGCTTGAGCACCCGCAACACCCGGCCACGGGCGTTGGTCTCGACTTCCTCGTAACCCACCTGACCGTGCAGGGC‑GGCCTCGTAGAAGCGCt                                                                                                                    <  7:160513/149‑1 (MQ=255)                                   ctGCAGCTTGATGTCCAGGCTCAGCACAATGTCCTTGCCCGGCTTCGGATCGGTGCGCTTGAGCACCCGCAACACCCGGCCACGGGCGTTGGTCTCGACTTCCTCGTAACCCACCatatcggcaagaccggcatcgagcgcttctac                                                                                                                    >  4:29773‑M1/1‑115 (MQ=255)                                   ctGCAGCTTGATGTCCAGGCTCAGCACAATGTCCTTGCCCGGCTTCGGATCGGTGCGCTTGAGCACCCGCAACACCCGGCCACGGGCGTTGGTCTCGACTTCCTCGTAACCCACCatatcggcaagaccggcatcgagcgcttctac                                                                                                                    >  8:278417‑M1/1‑115 (MQ=255)                                        gCTTGATGTCCAGGCTCAGCACAATGTCCTTGCCCGGCTTCGGATCGGTGCGCTTGAGCACCCGCAACACCCGGCCACGGGCGTTAGTCTCGACTTCCTCGTAACCCACCTGACCGTGCAGGGC‑GGCCTCGTAGAAGCGCTCGATGCCg                                                                                                            <  5:160861/149‑1 (MQ=255)                                         cTTGATGTCCAGGCTCAGCACAATGTCCTTGCCCGGCTTCGGATCGGTGCGCATGAGCACCCGCAACACCCGGCCACGGGCGTTGGTCTCGACTTCCTCGTAACCCACCAGACCGTGCAGGGC‑GGCCTCGAAGAACCGCTCGAAGCCgg                                                                                                           >  4:292299/1‑149 (MQ=255)                                                tCCAGGCTCAGCACAATGTCCTTGCCCGGCTTCGGATCGGTGCGCTTGAGCACCCGCAACACCCGGCCACGGGCGTTGGTCTCGACTTCCTCGTAACCCACCTGACCGTGCAGGGC‑GGCCTCGTAGAAGCGCTCGATGCCGGTCTTGcc                                                                                                    <  2:159025/149‑1 (MQ=255)                                                tCCAGGCTCAGCACAATGTCCTTGCCCGGCTTCGGATCGGTGCGCTTGAGCACCCGCAACACCCGGCCACGGGCGTTGGTCTCGACTTCCTCGTAACCCACCTGACCGTGCAGGGC‑GGCCTCGTAGAAGCGCTCGATGCCGGTCTTGc                                                                                                     <  1:278792/148‑1 (MQ=255)                                                   cggCTCAGCACAATGTCCTTGCCCGGCTTCGGATCGGTGCGCTTGAGCACCCGCAACACCCGGCCACGGGCGTTGGTCTCGACTTCCTCGTAACCCACCTGACCGTGCAGGGC‑GGCCTCGTAGAAGCGCTCGATGCCGGTCTTGCCGat                                                                                                 <  2:65545/148‑1 (MQ=255)                                                     gCTCAGCACAATGTCCTTGCCCGGCTTCGGATCGGTGCGCTTGAGCACCCGCAACACCCGGCCACGGGCGTTGGTCTCGACTTCCTCGTAACCCACCTGACCGTGCAGGGC‑GGCCTCGTAGAAGCGCTCGATGCCGGTCTTGCCGatat                                                                                               <  5:96172/149‑1 (MQ=255)                                                         aGCACAATGTCCTTGCCCGGCTTCGGATCGGTGCGCTTGAGCACCCGCAACACCCGGCCACGGGCGTTGGTCTCGACTTCCTCGTAACCCACCTGACCGTGCAGGGC‑GGCCTCGTAGAAGCGCTCGATGCCGGTCTTGCCGATATggtg                                                                                           <  1:186486‑M2/149‑5 (MQ=255)                                                           cacaATGTCCTTGCCCGGCTTCGGATCGGTGCGCTTGAGCACCCGCAACACCCGGCCACGGGCGTTGGTCTCGACTTCCTCGTAACCCACCatatcggcaagaccggcatcgagcgcttctacgaggccgccctgcacggtcaggtggg                                                                                          <  3:29773‑M1/149‑59 (MQ=255)                                                           cacaATGTCCTTGCCCGGCTTCGGATCGGTGCGCTTGAGCACCCGCAACACCCGGCCACGGGCGTTGGTCTCGACTTCCTCGTAACCCACCTGACCGTGCAGGGC‑GGCCTCGTAGAAGCGCTCGATGCCGGTCTTGCCGATATggtggg                                                                                         <  8:52254‑M2/149‑7 (MQ=255)                                                                tGTCCTTGCCCGGCTTCGGATCGGTGCGCTTGAGCACCCGCAACACCCGGCCACGGGCGTTGGTCTCGACTTCCTCGTAACCCACCatatcggcaagaccggcatcgagcgcttctacgaggccgccctgcacggtcaggtgggttacg                                                                                     <  7:278417‑M1/149‑64 (MQ=255)                                                                    cTTGCCCGGCTTCGGATCGGTGCGCTTGAGCACCCGCAACACCCGGCCACGGGCGTTGGTCTCGACTTCCTCGTAACCCACCTGACCGTGCAGGGC‑GGCCTCGTAGAAGCGCTCGATGCCGGTCTTGCCGATATGGTGGGTACCGCTg                                                                                 <  2:186486/148‑1 (MQ=255)                                                                     ttGCCCGGCTTCGGATCGGTGCGCTTGAGCACCCGCAACACCCGGCCACGGGCGTTGGTCTCGACTTCCTCGTAACCCACCTGACCGTGCAGGGC‑GGCCTCGTAGAAGCGCTCGATGCCGGTCTTGCCGATATGGTGGGTACCGCTg                                                                                 >  2:270489/1‑147 (MQ=255)                                                                       gCCCGGCTTCGGATCGGTGCGCTTGAGCACCCGCAACACCCGGCCACGGGCGTTGGTCTCGACTTCCTCGTAACCCACCTGACCGTGCAGGGC‑GGCCTCGTAGAAGCGCTCGATGCCGGTCTTGCCGATATGGTGGGTACCGCTGTa                                                                               <  8:93953/147‑1 (MQ=255)                                                                                cGGATCGGTGCGCTTGAGCACCCGCAACACCCGGCCACGTGCGTTGGTCTCTACTTCGTGGTAACCCACCTGACCGTGCAGGGC‑GGCCTCGTAGAAGCGCTCGATGCCGGTCTTGCCGATATGGTGGTTACCGCTGTAGTTCACCgg                                                                      <  3:292299/147‑1 (MQ=38)                                                                                 ggATCGGTGCGCTTGAGCACCCGCAACACCCGGCCACGGGCGTTGGTCTCGACTTCCTCGTAACCCACCTGACCGTGCAGGGC‑GGCCTCGTAGAAGCGCTCGATGCCGGTCTTGCCGATATGGTGGGTACCGCTGTAGTTCACCGGGt                                                                    <  1:270489/148‑1 (MQ=255)                                                                                      ggTGCGCTTGAGCACCCGCAACACCCGGCCACGGGCGTTGGTCTCGACTTCCTCGTAACCCACCTGACCGTGCAGGGC‑GGCCTCGTAGAAGCGCTCGATGCCGGTCTTGCCGATATGGTGGGTACCGCTGTAGTTCACCGGGTCGAGc                                                               <  3:129150/148‑1 (MQ=255)                                                                                        tGCGCTTGAGCACCCGCAACACCCGGCCACGGGCGTTGGTCTCGACTTCCTCGTAACCCACCTGACCGTGCAGGGC‑GGCCTCGTAGAAGCGCTCGATGCCGGTCTTGCCGATATGGTGGGTACCGCTGTAGTTCACCGGGTCGAGCGtt                                                            >  4:170763/1‑149 (MQ=255)                                                                                             ttGAGCACCCGCAACACCCGGCCACGGGCGTTGGTCTCGACTTCCTCGTAACCCACCTGACCGTGCAGGGC‑GGCCTCGTAGAAGCGCTCGATGCCGGTCTTGCCGATATGGTGGGTACCGCTGTAGTTCACCGGGTCGAGCGTTTTCAg                                                       >  7:216095/1‑149 (MQ=255)                                                                                                   aCCCGCAACACCCGGCAACGGGCGTTGGTCTCGACTTCCTCGTAACCCACCTGACCGTGCAGGGC‑GGCCTCGTAGAAGCGCTCGATGCCGGTCTTGCCGATATGGTGGGTACCGCAGTAGTTCACCGGGTCGAGCGTTATCAGCTAttt                                                 >  6:9483/1‑149 (MQ=255)                                                                                                    cccGCAACACCCGGCCACGGTCGTTGTTCTCGACTTCCTCGTAACCCACCTGACCGTGCAGGGC‑GGCCTCGTAGAAGCGCTCGATGCCGGTCTTGCCGATATGGTGGGTACCGCTGTAGATCACCGGGTCGAGCGTTTTCAGCTCTTtc                                                <  5:9483/149‑1 (MQ=255)                                                                                                      cGCAACACCCGGCCACGGGCGTTGGTCTCGACTTCCTCGTAACCCACCTGACCGTGCAGGGC‑GGCCTCGTAGAAGCGCTCGATGCCGGTCTTGCCGATATGGTGGGTACCGCTGTAGTTCACCGGGTCGAGCGt                                                             >  5:28059/1‑134 (MQ=255)                                                                                                      cGCAACACCCGGCCACGGGCGTTGGTCTCGACTTCCTCGTAACCCACCTGACCGTGCAGGGC‑GGCCTCGTAGAAGCGCTCGATGCCGGTCTTGCCGATATGGTGGGTACCGCTGTAGTTCACCGGGTCGAGCGt                                                             <  6:28059/134‑1 (MQ=255)                                                                                                      cGCAACACCCGGCCACGGGCGTTGGTCTCGACTTCCTCGTAACCCACCTGACCGTGCAGGGC‑GGCCTCGTAGAAGCGCTCGATGCCGGTCTTGCCGATATGGTGGGTACCGCTGTAGTTCACCGGGTCGAGCGTTTTCAGCTCTTtctc                                              <  7:52254/149‑1 (MQ=255)                                                                                                        cAACACCCGGCCACGGGCGTTGGTCTCGACTTCCTCGTAACCCACCTGACCGTGCAGGGC‑GGCCTCGTAGAAGCGCTCGATGCCGGTCTTGCCGATATGGTGGGTACCGCTGTAGTTCACCGGGTCGAGCGTTTTCAg                                                       <  3:224969/138‑1 (MQ=255)                                                                                                        cAACACCCGGCCACGGGCGTTGGTCTCGACTTCCTCGTAACCCACCTGACCGTGCAGGGC‑GGCCTCGTAGAAGCGCTCGATGCCGGTCTTGCCGATATGGTGGGTACCGCTGTAGTTCACCGGGTCGAGCGTTTTCAGCTCTTTCTCGt                                            <  3:170763/149‑1 (MQ=255)                                                                                                         atcacCCGGCCACGGGCGTTGGTCTCGACTTCCTCGTAACCCACCTGACCGTGCAGGGC‑GGCCTCGTAGAAGCGCTCGATGCCGGTCTTGCCGATATGGTGGGTACCGCTGTAGTTCACCGGGTCGAGCGTTTTCAGCTCTTTCTCGtt                                           <  8:37772/147‑1 (MQ=255)                                                                                                         aaCACCCGGCCACGGGCGTTGGTCTCGACTTCCTCGTAACCCACCTGACCGTGCAGGGC‑GGCCTCGTAGAAGCGCTCGATGCCGGTCTTGCCGATATGGTGGGTACCGCTGTAGTTCACCGGGTCGAGCGTTTTCAGCTCTTTCTCGtt                                           <  8:216095/149‑1 (MQ=255)                                                                                                            acCCGGCCACGGGCGTTGGTCTCGACTTCCTCGTAACCCACCTGACCGTGCAGGGC‑GGCCTCGTAGAAGCGCTCGATGCCGGTCTTGCCGATATGGTGGGTACCGCTGTAGTTCACCGGGTCGAGCGTTTTCAGCTCTTTCTCGTTGAt                                        >  3:143630/1‑149 (MQ=255)                                                                                                              ccGGCCACGGGCGTTGGTCTCGACTTCCTCGTAACCCACCTGACCGTGCAGGGC‑GGCCTCGTAGAAGCGCTCGATGCCGGTCTTGCCGATATGGTGGGTACCGCTGTAGTTCACCGGGTCGAGCGTTTTCAGCTCTTTCTCGTTGATcc                                      >  6:189809/1‑149 (MQ=255)                                                                                                                  ccACGGGCGTTGGTCTCGACTTCCTCGTAACCCACCTGACCGTGCAGGGC‑GGCCTCGTAGAAGCGCTCGATGCCGGTCTTGCCGATATGGTGGGTACCGCTGTAGTTCACCGGGTCGAGCGTTTTCa                                                        >  6:12913/1‑127 (MQ=255)                                                                                                                  ccACGGGCGTTGGTCTCGACTTCCTCGTAACCCACCTGACCGTGCAGGGC‑GGCCTCGTAGAAGCGCTCGATGCCGGTCTTGCCGATATGGTGGGTACCGCTGTAGTTCACCGGGTCGAGCGTTTTCa                                                        <  5:12913/127‑1 (MQ=255)                                                                                                                   cACGGGCGTTGGTCTCGACTTCCTCGTAACCCACCTGACCGTGCAGGGCAGGCCTCGTAGAAGCGCTCGATGCCGGTCTTGCCGATATGGTGGGTACCGCTGTAGTTAACCGGGTCGAGCGTTTTCAGCTCTTTCTCGTTGATCCGccc                                  >  1:226136/1‑149 (MQ=255)                                                                                                                    aCGGGCGTTGGTCTCGACTTCCTCGTAACCCACCTGACCGTGCAGGGC‑GGCCTCGTAGAAGCGCTCGATGCCGGTCTTGCCGATATGGTGGGTACCGCTGTAGTTCACCGGGTCGAGCGtttt                                                          <  1:201434/123‑1 (MQ=255)                                                                                                                    aCGGGCGTTGGTCTCGACTTCCTCGTAACCCACCTGACCGTGCAGGGC‑GGCCTCGTAGAAGCGCTCGATGCCGGTCTTGCCGATATGGTGGGTACCGCTGTAGTTCACCGGGTCGAGCGtttt                                                          >  2:201434/1‑123 (MQ=255)                                                                                                                    aCGGGCGTTGGTCTCGACTTCCTCGTAACCCACCTGACCGTGCAGGGC‑GGCCTCGTAGAAGCGCTCGATGCCGGTCTTGCCGATATGGTGGGTACCGCTGTAGTTCACCGGGTCGAGCGTTTTCAGCTCTTTCTCGt                                            <  8:157904/137‑1 (MQ=255)                                                                                                                    aCGGGCGTTGGTCTCGACTTCCTCGTAACCCACCTGACCGTGCAGGGC‑GGCCTCGTAGAAGCGCTCGATGCCGGTCTTGCCGATATGGTGGGTACCGCTGTAGTTCACCGGGTCGAGCGTTTTCAGCTCTTTCTCGt                                            >  7:157904/1‑137 (MQ=255)                                                                                                                           ttGGTCTCGACTTCCTCGTAACCCACCTGACCGTGCAGGGC‑GGCCTCGTAGAAGCGCTCGATGCCGGTCTTGCCGATATGGTGGGTACCGCTGTAGTTCACCGGGTCGAGCGTTTTCAGCTCTTTCTCGTTGATCCGCCCGACATAAcc                         >  4:168751/1‑149 (MQ=255)                                                                                                                                   gACTTCCTCGTAACCCACCTGACCGTGCAGGGC‑GGCCTCGTAGAAGCGCTCGATGCCGGTCTTGCCGATATGGTGGGTACCGCTGTAGTTCACCGGGTCGAGCGTTTTCAGCTCTTTCTCGTTGATCCGCCCGACATAACCCACCGAAt                 <  4:143630/149‑1 (MQ=255)                                                                                                                                   gACTTCCTCGTAACCCACCTGACCGTGCAGGGC‑GGCCTCGTAGAAGCGCTCGATGCCGGTCTTGCCGATATGGTGGGTACCGCTGTAGTTCACCAGGTCGAGCGTTTTc                                                         <  6:21085/109‑1 (MQ=255)                                                                                                                                   gACTTCCTCGTAACCCACCTGACCGTGCAGGGC‑GGCCTCGTAGAAGCGCTCGATGCCGGTCTTGCCGATATGGTGGGTACCGCTGTAGTTCACCAGGTCGAGCGTTTTc                                                         >  5:21085/1‑109 (MQ=255)                                                                                                                                    aCTTCCTCGTAACCCACCTGACCGTGCAGGGC‑GGCCTCGTAGAAGCGCTCGATGCCGGTCTTGCCGATATGGTGGGTACCGCTGTAGTTCACCGGGTCGAGCGTTTTCAGCTCTTTCTCGTTGATCCGCCCGACATAACCCACCGAATg                <  3:168751/149‑1 (MQ=255)                                                                                                                                      ttCCTCGTAACCCACCTGACCGTGCAGGGC‑GGCCTCGTAGAAGCGCTCGATGCCGGTCTTGCCGATATGGTGGGTACCGCTGTAGTTCACCGGGTCGAGCGTTTTCAGCTCTTTCTCGTTGATCCGCCCGACATAACCCACCGAATggg              >  5:122972/1‑149 (MQ=255)                                                                                                                                         cTCGTAACCCACCTGACCGTGCAGGGC‑GGCCTCGTAGAAGCGCTCGATGCCGGTCTTGCCGATATGGTGGGTACCGCTGTAGTTCACCGGGTCGAGCGTTTTCAGCTCTTTCTCGTTg                                          <  8:58496/118‑1 (MQ=255)                                                                                                                                          tCGTAACCCACCTGACCGTGCAGGGC‑GGCCTCGTAGAAGCGCTCGATGCCGGTCTTGCCGATATGGTGGGTACCGCTGTAGTTCACCGGGTCGAGCGTTTTCAGCTCTTTCTCGTTGATCCGCCCGACATAACCCACCGAATGGGCGa           >  1:65648/1‑148 (MQ=255)                                                                                                                                           cGTAACCCACCTGACCGTGCAGGGC‑GGCCTCGTAGAAGCGCTCGATGCCGGTCTTGCCGATATggtgggttacgaggaagtcgagaccaacgcccgtggccgggtgttgcgggtgctcaagcgcaccgatccgaagccgggcaaggaca         <  7:278417‑M2/149‑87 (MQ=255)                                                                                                                                            gTAACCCACCTGACCGTGCAGGGC‑GGCCTCGTAGAAGCGCTCGATGCCGGTCTTGCCGATATGGTGGGTACCGCTGTAGTTCACCGGGTCGAGCGTTTTCAGCTCTTTCTCGTTGATCCGCCCGACATAACCCACCGAATGGGCGAAAt        >  3:197563/1‑149 (MQ=255)                                                                                                                                                cccACCatatcggcaagaccggcatcgagcgcttctacgaggccgccctgcacggtcaggtgggttacgaggaagtcgagaccaacgcccgtggccgggtgttgcgggtgctcaagcgcaccgatccgaagccgggcaaggacattgtg     <  8:52254‑M1/149‑144 (MQ=255)                                                                                                                                                cccACCTGACCGTGCAGGGC‑GGCCTCGTAGAAGCGCTCGATGCCGGTCTTGCCGATATggtgggttacgaggaagtcgagaccaacgcccgtggccgggtgttgcgggtgctcaagcgcaccgatccgaagccgggcaaggacattgtg    <  3:29773‑M2/149‑92 (MQ=255)                                                                                                                                                  caccatatcggcaagaccggcatcgagcgcttctacgaggccgccctgcacggtcaggtgggttacgaggaagtcgagaccaacgcccgtggccgggtgttgcgggtgctcaagcgcaccgatccgaagccgggcaaggacattgtgct   <  1:186486‑M1/149‑146 (MQ=255)                                                                                                                                                  cACCAGACCGTGCAGGGC‑GGCCTCGTAGAAGCGCTCGATGCCGGTCTTGCCGATATGGTGGGTACCGCTGTAGTTCACCGGGTCGAGCGTTTTCAGCTCTTTCTCGTTGATCCGCCCGACATAACCCACCGAATGGGCGAAATGCGCAc  >  2:3192/1‑149 (MQ=255)                                                                                                                                                     |                                                                                                                                                   CACGCCGGCCTCCCAGGGCGGCTTCAGCGGCCTCCTGCAGCTTGATGTCCAGGCTCAGCACAATGTCCTTGCCCGGCTTCGGATCGGTGCGCTTGAGCACCCGCAACACCCGGCCACGGGCGTTGGTCTCGACTTCCTCGTAACCCACCTGACCGTGCAGGGC‑GGCCTCGTAGAAGCGCTCGATGCCGGTCTTGCCGATATGGTGGGTACCGCTGTAGTTCACCGGGTCGAGCGTTTTCAGCTCTTTCTCGTTGATCCGCCCGACATAACCCACCGAATGGGCGAAATGCGCAC  >  NC_002947/5471103‑5471396

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.