New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5471251	50 (1.020)	4 (0.090)	3/248	NT	7.5%	coding (654/1890 nt)	mrdA‑II	transpeptidase
	?	NC_002947	= 5471303	51 (1.100)					coding (602/1890 nt)	mrdA‑II	transpeptidase

GCTCAGCACAATGTCCTTGCCCGGCTTCGGATCGGTGCGCTTGAGCACCCGCAACACCCGGCCACGGGCGTTGGTCTCGACTTCCTCGTAACCCACCTGACCGTGCAGGGC‑GGCCTCGTAGAAGCGCTCGATGCCGGTCTTGCCGATATGGTGGGTACCGCTGTAGTTCACCGGGTCGAGCGTTTTCAGCTCTTTCTCGTTGATCCGCCCGACATAACCCACCGAATGGGCGAAATGCGCACCCTGCGGGTAATGCCGCACCAGCTGTGCCACCACCTCGACACCCGGCAGGC  >  NC_002947/5471155‑5471447                                                                                                                                                      |                                                                                                                                                 gCTCAGCACAATGTCCTTGCCCGGCTTCGGATCGGTGCGCTTGAGCACCCGCAACACCCGGCCACGGGCGTTGGTCTCGACTTCCTCGTAACCCACCTGACCGTGCAGGGC‑GGCCTCGTAGAAGCGCTCGATGCCGGTCTTGCCGatat                                                                                                                                                  <  5:96172/149‑1 (MQ=255)     aGCACAATGTCCTTGCCCGGCTTCGGATCGGTGCGCTTGAGCACCCGCAACACCCGGCCACGGGCGTTGGTCTCGACTTCCTCGTAACCCACCTGACCGTGCAGGGC‑GGCCTCGTAGAAGCGCTCGATGCCGGTCTTGCCGATATggtg                                                                                                                                              <  1:186486‑M2/149‑5 (MQ=255)       cacaATGTCCTTGCCCGGCTTCGGATCGGTGCGCTTGAGCACCCGCAACACCCGGCCACGGGCGTTGGTCTCGACTTCCTCGTAACCCACCTGACCGTGCAGGGC‑GGCCTCGTAGAAGCGCTCGATGCCGGTCTTGCCGATATggtggg                                                                                                                                            <  8:52254‑M2/149‑7 (MQ=255)                cTTGCCCGGCTTCGGATCGGTGCGCTTGAGCACCCGCAACACCCGGCCACGGGCGTTGGTCTCGACTTCCTCGTAACCCACCTGACCGTGCAGGGC‑GGCCTCGTAGAAGCGCTCGATGCCGGTCTTGCCGATATGGTGGGTACCGCTg                                                                                                                                    <  2:186486/148‑1 (MQ=255)                 ttGCCCGGCTTCGGATCGGTGCGCTTGAGCACCCGCAACACCCGGCCACGGGCGTTGGTCTCGACTTCCTCGTAACCCACCTGACCGTGCAGGGC‑GGCCTCGTAGAAGCGCTCGATGCCGGTCTTGCCGATATGGTGGGTACCGCTg                                                                                                                                    >  2:270489/1‑147 (MQ=255)                   gCCCGGCTTCGGATCGGTGCGCTTGAGCACCCGCAACACCCGGCCACGGGCGTTGGTCTCGACTTCCTCGTAACCCACCTGACCGTGCAGGGC‑GGCCTCGTAGAAGCGCTCGATGCCGGTCTTGCCGATATGGTGGGTACCGCTGTa                                                                                                                                  <  8:93953/147‑1 (MQ=255)                            cGGATCGGTGCGCTTGAGCACCCGCAACACCCGGCCACGTGCGTTGGTCTCTACTTCGTGGTAACCCACCTGACCGTGCAGGGC‑GGCCTCGTAGAAGCGCTCGATGCCGGTCTTGCCGATATGGTGGTTACCGCTGTAGTTCACCgg                                                                                                                         <  3:292299/147‑1 (MQ=38)                             ggATCGGTGCGCTTGAGCACCCGCAACACCCGGCCACGGGCGTTGGTCTCGACTTCCTCGTAACCCACCTGACCGTGCAGGGC‑GGCCTCGTAGAAGCGCTCGATGCCGGTCTTGCCGATATGGTGGGTACCGCTGTAGTTCACCGGGt                                                                                                                       <  1:270489/148‑1 (MQ=255)                                  ggTGCGCTTGAGCACCCGCAACACCCGGCCACGGGCGTTGGTCTCGACTTCCTCGTAACCCACCTGACCGTGCAGGGC‑GGCCTCGTAGAAGCGCTCGATGCCGGTCTTGCCGATATGGTGGGTACCGCTGTAGTTCACCGGGTCGAGc                                                                                                                  <  3:129150/148‑1 (MQ=255)                                    tGCGCTTGAGCACCCGCAACACCCGGCCACGGGCGTTGGTCTCGACTTCCTCGTAACCCACCTGACCGTGCAGGGC‑GGCCTCGTAGAAGCGCTCGATGCCGGTCTTGCCGATATGGTGGGTACCGCTGTAGTTCACCGGGTCGAGCGtt                                                                                                               >  4:170763/1‑149 (MQ=255)                                         ttGAGCACCCGCAACACCCGGCCACGGGCGTTGGTCTCGACTTCCTCGTAACCCACCTGACCGTGCAGGGC‑GGCCTCGTAGAAGCGCTCGATGCCGGTCTTGCCGATATGGTGGGTACCGCTGTAGTTCACCGGGTCGAGCGTTTTCAg                                                                                                          >  7:216095/1‑149 (MQ=255)                                               aCCCGCAACACCCGGCAACGGGCGTTGGTCTCGACTTCCTCGTAACCCACCTGACCGTGCAGGGC‑GGCCTCGTAGAAGCGCTCGATGCCGGTCTTGCCGATATGGTGGGTACCGCAGTAGTTCACCGGGTCGAGCGTTATCAGCTAttt                                                                                                    >  6:9483/1‑149 (MQ=255)                                                cccGCAACACCCGGCCACGGTCGTTGTTCTCGACTTCCTCGTAACCCACCTGACCGTGCAGGGC‑GGCCTCGTAGAAGCGCTCGATGCCGGTCTTGCCGATATGGTGGGTACCGCTGTAGATCACCGGGTCGAGCGTTTTCAGCTCTTtc                                                                                                   <  5:9483/149‑1 (MQ=255)                                                  cGCAACACCCGGCCACGGGCGTTGGTCTCGACTTCCTCGTAACCCACCTGACCGTGCAGGGC‑GGCCTCGTAGAAGCGCTCGATGCCGGTCTTGCCGATATGGTGGGTACCGCTGTAGTTCACCGGGTCGAGCGt                                                                                                                <  6:28059/134‑1 (MQ=255)                                                  cGCAACACCCGGCCACGGGCGTTGGTCTCGACTTCCTCGTAACCCACCTGACCGTGCAGGGC‑GGCCTCGTAGAAGCGCTCGATGCCGGTCTTGCCGATATGGTGGGTACCGCTGTAGTTCACCGGGTCGAGCGt                                                                                                                >  5:28059/1‑134 (MQ=255)                                                  cGCAACACCCGGCCACGGGCGTTGGTCTCGACTTCCTCGTAACCCACCTGACCGTGCAGGGC‑GGCCTCGTAGAAGCGCTCGATGCCGGTCTTGCCGATATGGTGGGTACCGCTGTAGTTCACCGGGTCGAGCGTTTTCAGCTCTTtctc                                                                                                 <  7:52254/149‑1 (MQ=255)                                                    cAACACCCGGCCACGGGCGTTGGTCTCGACTTCCTCGTAACCCACCTGACCGTGCAGGGC‑GGCCTCGTAGAAGCGCTCGATGCCGGTCTTGCCGATATGGTGGGTACCGCTGTAGTTCACCGGGTCGAGCGTTTTCAg                                                                                                          <  3:224969/138‑1 (MQ=255)                                                    cAACACCCGGCCACGGGCGTTGGTCTCGACTTCCTCGTAACCCACCTGACCGTGCAGGGC‑GGCCTCGTAGAAGCGCTCGATGCCGGTCTTGCCGATATGGTGGGTACCGCTGTAGTTCACCGGGTCGAGCGTTTTCAGCTCTTTCTCGt                                                                                               <  3:170763/149‑1 (MQ=255)                                                     atcacCCGGCCACGGGCGTTGGTCTCGACTTCCTCGTAACCCACCTGACCGTGCAGGGC‑GGCCTCGTAGAAGCGCTCGATGCCGGTCTTGCCGATATGGTGGGTACCGCTGTAGTTCACCGGGTCGAGCGTTTTCAGCTCTTTCTCGtt                                                                                              <  8:37772/147‑1 (MQ=255)                                                     aaCACCCGGCCACGGGCGTTGGTCTCGACTTCCTCGTAACCCACCTGACCGTGCAGGGC‑GGCCTCGTAGAAGCGCTCGATGCCGGTCTTGCCGATATGGTGGGTACCGCTGTAGTTCACCGGGTCGAGCGTTTTCAGCTCTTTCTCGtt                                                                                              <  8:216095/149‑1 (MQ=255)                                                        acCCGGCCACGGGCGTTGGTCTCGACTTCCTCGTAACCCACCTGACCGTGCAGGGC‑GGCCTCGTAGAAGCGCTCGATGCCGGTCTTGCCGATATGGTGGGTACCGCTGTAGTTCACCGGGTCGAGCGTTTTCAGCTCTTTCTCGTTGAt                                                                                           >  3:143630/1‑149 (MQ=255)                                                          ccGGCCACGGGCGTTGGTCTCGACTTCCTCGTAACCCACCTGACCGTGCAGGGC‑GGCCTCGTAGAAGCGCTCGATGCCGGTCTTGCCGATATGGTGGGTACCGCTGTAGTTCACCGGGTCGAGCGTTTTCAGCTCTTTCTCGTTGATcc                                                                                         >  6:189809/1‑149 (MQ=255)                                                              ccACGGGCGTTGGTCTCGACTTCCTCGTAACCCACCTGACCGTGCAGGGC‑GGCCTCGTAGAAGCGCTCGATGCCGGTCTTGCCGATATGGTGGGTACCGCTGTAGTTCACCGGGTCGAGCGTTTTCa                                                                                                           >  6:12913/1‑127 (MQ=255)                                                              ccACGGGCGTTGGTCTCGACTTCCTCGTAACCCACCTGACCGTGCAGGGC‑GGCCTCGTAGAAGCGCTCGATGCCGGTCTTGCCGATATGGTGGGTACCGCTGTAGTTCACCGGGTCGAGCGTTTTCa                                                                                                           <  5:12913/127‑1 (MQ=255)                                                               cACGGGCGTTGGTCTCGACTTCCTCGTAACCCACCTGACCGTGCAGGGCAGGCCTCGTAGAAGCGCTCGATGCCGGTCTTGCCGATATGGTGGGTACCGCTGTAGTTAACCGGGTCGAGCGTTTTCAGCTCTTTCTCGTTGATCCGccc                                                                                     >  1:226136/1‑149 (MQ=255)                                                                aCGGGCGTTGGTCTCGACTTCCTCGTAACCCACCTGACCGTGCAGGGC‑GGCCTCGTAGAAGCGCTCGATGCCGGTCTTGCCGATATGGTGGGTACCGCTGTAGTTCACCGGGTCGAGCGtttt                                                                                                             <  1:201434/123‑1 (MQ=255)                                                                aCGGGCGTTGGTCTCGACTTCCTCGTAACCCACCTGACCGTGCAGGGC‑GGCCTCGTAGAAGCGCTCGATGCCGGTCTTGCCGATATGGTGGGTACCGCTGTAGTTCACCGGGTCGAGCGtttt                                                                                                             >  2:201434/1‑123 (MQ=255)                                                                aCGGGCGTTGGTCTCGACTTCCTCGTAACCCACCTGACCGTGCAGGGC‑GGCCTCGTAGAAGCGCTCGATGCCGGTCTTGCCGATATGGTGGGTACCGCTGTAGTTCACCGGGTCGAGCGTTTTCAGCTCTTTCTCGt                                                                                               >  7:157904/1‑137 (MQ=255)                                                                aCGGGCGTTGGTCTCGACTTCCTCGTAACCCACCTGACCGTGCAGGGC‑GGCCTCGTAGAAGCGCTCGATGCCGGTCTTGCCGATATGGTGGGTACCGCTGTAGTTCACCGGGTCGAGCGTTTTCAGCTCTTTCTCGt                                                                                               <  8:157904/137‑1 (MQ=255)                                                                       ttGGTCTCGACTTCCTCGTAACCCACCTGACCGTGCAGGGC‑GGCCTCGTAGAAGCGCTCGATGCCGGTCTTGCCGATATGGTGGGTACCGCTGTAGTTCACCGGGTCGAGCGTTTTCAGCTCTTTCTCGTTGATCCGCCCGACATAAcc                                                                            >  4:168751/1‑149 (MQ=255)                                                                               gACTTCCTCGTAACCCACCTGACCGTGCAGGGC‑GGCCTCGTAGAAGCGCTCGATGCCGGTCTTGCCGATATGGTGGGTACCGCTGTAGTTCACCGGGTCGAGCGTTTTCAGCTCTTTCTCGTTGATCCGCCCGACATAACCCACCGAAt                                                                    <  4:143630/149‑1 (MQ=255)                                                                               gACTTCCTCGTAACCCACCTGACCGTGCAGGGC‑GGCCTCGTAGAAGCGCTCGATGCCGGTCTTGCCGATATGGTGGGTACCGCTGTAGTTCACCAGGTCGAGCGTTTTc                                                                                                            >  5:21085/1‑109 (MQ=255)                                                                               gACTTCCTCGTAACCCACCTGACCGTGCAGGGC‑GGCCTCGTAGAAGCGCTCGATGCCGGTCTTGCCGATATGGTGGGTACCGCTGTAGTTCACCAGGTCGAGCGTTTTc                                                                                                            <  6:21085/109‑1 (MQ=255)                                                                                aCTTCCTCGTAACCCACCTGACCGTGCAGGGC‑GGCCTCGTAGAAGCGCTCGATGCCGGTCTTGCCGATATGGTGGGTACCGCTGTAGTTCACCGGGTCGAGCGTTTTCAGCTCTTTCTCGTTGATCCGCCCGACATAACCCACCGAATg                                                                   <  3:168751/149‑1 (MQ=255)                                                                                  ttCCTCGTAACCCACCTGACCGTGCAGGGC‑GGCCTCGTAGAAGCGCTCGATGCCGGTCTTGCCGATATGGTGGGTACCGCTGTAGTTCACCGGGTCGAGCGTTTTCAGCTCTTTCTCGTTGATCCGCCCGACATAACCCACCGAATggg                                                                 >  5:122972/1‑149 (MQ=255)                                                                                     cTCGTAACCCACCTGACCGTGCAGGGC‑GGCCTCGTAGAAGCGCTCGATGCCGGTCTTGCCGATATGGTGGGTACCGCTGTAGTTCACCGGGTCGAGCGTTTTCAGCTCTTTCTCGTTg                                                                                             <  8:58496/118‑1 (MQ=255)                                                                                      tCGTAACCCACCTGACCGTGCAGGGC‑GGCCTCGTAGAAGCGCTCGATGCCGGTCTTGCCGATATGGTGGGTACCGCTGTAGTTCACCGGGTCGAGCGTTTTCAGCTCTTTCTCGTTGATCCGCCCGACATAACCCACCGAATGGGCGa                                                              >  1:65648/1‑148 (MQ=255)                                                                                       cGTAACCCACCTGACCGTGCAGGGC‑GGCCTCGTAGAAGCGCTCGATGCCGGTCTTGCCGATATggtgggttacgaggaagtcgagaccaacgcccgtggccgggtgttgcgggtgctcaagcgcaccgatccgaagccgggcaaggaca                                                            <  7:278417‑M2/149‑87 (MQ=255)                                                                                        gTAACCCACCTGACCGTGCAGGGC‑GGCCTCGTAGAAGCGCTCGATGCCGGTCTTGCCGATATGGTGGGTACCGCTGTAGTTCACCGGGTCGAGCGTTTTCAGCTCTTTCTCGTTGATCCGCCCGACATAACCCACCGAATGGGCGAAAt                                                           >  3:197563/1‑149 (MQ=255)                                                                                            cccACCTGACCGTGCAGGGC‑GGCCTCGTAGAAGCGCTCGATGCCGGTCTTGCCGATATggtgggttacgaggaagtcgagaccaacgcccgtggccgggtgttgcgggtgctcaagcgcaccgatccgaagccgggcaaggacattgtg                                                       <  3:29773‑M2/149‑92 (MQ=255)                                                                                              cACCAGACCGTGCAGGGC‑GGCCTCGTAGAAGCGCTCGATGCCGGTCTTGCCGATATGGTGGGTACCGCTGTAGTTCACCGGGTCGAGCGTTTTCAGCTCTTTCTCGTTGATCCGCCCGACATAACCCACCGAATGGGCGAAATGCGCAc                                                     >  2:3192/1‑149 (MQ=255)                                                                                                      cGTGCAGGGC‑GGCCTCGTAGAAGCGCTCGATGCCGGTCTTGCCGATATGGTGGGTACCGCTGTAGTTCACCGGGTCGAGCGTTTTCAGCTCTTTCTCGTTGATCCGCCCGACATAACCCACCGAATGGGCGAAATGCGCACCCTGCggg                                             >  5:112043/1‑149 (MQ=255)                                                                                                       gTGCAGGGC‑GGCCTCGTAGAAGCGCTCGATGCCGGTCTTGCCGATATGGTGGGTACCGCTGTAGTTCACCGGGTCGAGCGTTTTCAGCTCTTTCTCGTTGATCCGCCCGACATAACCCACCGAATGGGCGAAATGCGCACCCTGc                                                >  1:71009/1‑145 (MQ=255)                                                                                                       gTGCAGGGC‑GGCCTCGTAGAAGCGCTCGATGCCGGTCTTGCCGATATGGTGGGTACCGCTGTAGTTCACCGGGTCGAGCGTTTTCAGCTCTTTCTCGTTGATCCGCCCGACATAACCCACCGAATGGGCGAAATGCGCACCCTGc                                                <  2:71009/145‑1 (MQ=255)                                                                                                        tGCAGGGC‑GGCCTCGTAGAAGCGCTCGATGCCGGTCTTGCCGATATGGTGGGTACCGCTGTAGTTCACCGGGTCGAGCGTTTTCAGCTCTTTCTCGTTGATCCGCCCGACATAACCCACCGAATGGGCGAAATGCGCACCCTGCGGGTa                                           <  6:112043/149‑1 (MQ=255)                                                                                                            gggC‑GGCCTCGTAGAAGCGCTCGATGCCGGTCTTGCCGATATGGTGGGTACCGCTGTAGTTCACCGGGTCGAGCGTTTTCAGCTCTTTCTCGTTGATCCGCCCGACATAACCCACCGAATGGGCGAAATGCGCACCCTGCGGGTAATGc                                       <  5:189809/149‑1 (MQ=255)                                                                                                             ggc‑ggcCTCGTAGAAGCGCTCGATGCCGGTCTTGCCGATATGGTGGGTACCGCTGTAGTTCACCGGGTCGAGCGTTTTCAGCTCTTTCTCGTTGATCCGCCCGACATAACCCACCGAATGGGCGAAATGCGCACCCTGCGGGTAATGcc                                      >  4:102834/1‑149 (MQ=255)                                                                                                               c‑ggcCTCGTAGAAGCGCTCGATGCCGGTCTTGCCGATATGGTGGGTACCGCTGTAGTTCACCGGGTCGAGCGTTTTCAGCTATTTCTCGTTGATCCGCCCGACATAACCCACCGAATGGGCGAAATGCGCACCCTGCGGGTAATGCCGc                                    <  4:197563/149‑1 (MQ=255)                                                                                                                     tCGTAGAAGCGCTCGATGCCGGTCTTGCCGATATGGTGGGTACCGCTGTAGTTCACCGGGTCGAGCGTTTTCAGCTCTTTCTCGTTGATCCGCCCGACATAACCCACCGAATGGGCGAAATGCGCACCCTGAGGGTAATGCCGCATCAg                               >  2:241267/1‑149 (MQ=255)                                                                                                                       gTAGAAGCGCTCGATGCCGGTCTTGCCGATATggtgggttacgaggaagtcgagaccaacgcccgtggccgggtgttgcgggtgctcaagcgcaccgatccgaagccgggcaaggacattgtgctgagcctggacatcaagctgcag                               >  8:278417‑M2/1‑32 (MQ=255)                                                                                                                       gTAGAAGCGCTCGATGCCGGTCTTGCCGATATggtgggttacgaggaagtcgagaccaacgcccgtggccgggtgttgcgggtgctcaagcgcaccgatccgaagccgggcaaggacattgtgctgagcctggacatcaagctgcag                               >  4:29773‑M2/1‑32 (MQ=255)                                                                                                                       gTAGAAGCGCTCGATGCCGGTCTTGCCGATATGGTGGGTACCGCTGTAGTTCACCGGGTCGAGCGTTTTCAGCTCTTTCTCGTTGATCCGCCCGACATAACCCACCGAATGGGCGAAATGCGCACCCTGCGGGTAATGCCGCACCAGCt                             <  3:102834/149‑1 (MQ=255)                                                                                                                         aGAAGCGCTCGATGCCGGTCTTGCCGATATGGTGGGTACCGCTGTAGTTCACCGGGTCGAGCGTTTTCAGCTCTTTCTCGTTGATCCGCCCGACATAACCCACCGAATGGGCGAAATGCGCACCCTGCGGGTAATGCCGCACCAGCtgt                           >  5:186116/1‑149 (MQ=255)                                                                                                                          gAAGCGCTCGATGCCGGTCTTGCCGATATGGTGGGTACCGCTGTAGTTCACCGGGTCGAGCGTTTTCAGCTCTTTCTCGTTGATCCGCCCGACATAACCCACCGAATGGGCGAAATGCGCACCCTGCGGGTAATGCCGCACCAGCtgt                           <  6:19982/148‑1 (MQ=255)                                                                                                                                  cGATGCCGGTCTTGCCGATATGGTGGGTACCGCTGTAGTTCACCGGGTCGAGCGTTTTCAGCTCTTTCTCGTTGATCCGCCCGACATAACCCACCGAATGGGCGAAATGCGCACCCTGCGGGTAATGCCGCACCAGCTGTGCCaccacc                  <  6:122972/149‑1 (MQ=255)                                                                                                                                   gATGCCGGTCTTGCCGATATGGTGGGTACCGCTGTAGTTCACCGGGTCGAGCGTTTTCAGCTCTTTCTCGTTGATCCGCCCGACATAACCCACCGAATGGGCGAAATGCGCACCCTGCGGGTAATGCCGCACCAGCTGTGCCACCACCt                 >  8:287579/1‑149 (MQ=255)                                                                                                                                    aTGCCGGTCTTGCCGATATGGTGGGTACCGCTGTAGTTCACCGGGTCGAGCGTTTTCAGCTCTTTCTCGTTGATCCGCCCGACATAACCCACCGAATGGGCGAAATGCGCACCCTGCGGGTAATGCCGCACCAGCTGTGCCACCACCTc                <  1:3192/149‑1 (MQ=255)                                                                                                                                        cGGTCTTGCCGATATGGTGGGTACCGCTGTAGTTCACCGGGTCGAGCGTTTTCAGCTCTTTCTCGTTGATCCGCCCGACATAACCCACCGAATGGGCGAAATGCGCACCCTGCGGGTAATGCCGCACCAGCTGTGCCCCCACCTCGaca            >  5:53308/1‑149 (MQ=255)                                                                                                                                                  gATATGGTGGGTACCGCTGTAGTTCACCGGGTCGAGCGTTTTCAGCTCTTTCTCGTTGATCCGCCCGACATAACCCACCGAATGGGCGAAATGCGCACCCTGCGGGTAATGCCGCACCAGCTGTGCCACCACCTCGACACCCGGCAGGc  >  2:299662/1‑149 (MQ=255)                                                                                                                                                  gATATGGTGGGTACCGCTGTAGTTCACCGGGTCGAGCGTTTTCAGCTCTTTCTCGTTGATCCGCCCGACATAACCCACCGAATGGGCGAAATGCGCACCCTGCGGGTAATGCCGCACCAGCTGTGCCACCACCTCGACACCCGGCAGGc  <  2:226136/149‑1 (MQ=255)                                                                                                                                                      |                                                                                                                                                 GCTCAGCACAATGTCCTTGCCCGGCTTCGGATCGGTGCGCTTGAGCACCCGCAACACCCGGCCACGGGCGTTGGTCTCGACTTCCTCGTAACCCACCTGACCGTGCAGGGC‑GGCCTCGTAGAAGCGCTCGATGCCGGTCTTGCCGATATGGTGGGTACCGCTGTAGTTCACCGGGTCGAGCGTTTTCAGCTCTTTCTCGTTGATCCGCCCGACATAACCCACCGAATGGGCGAAATGCGCACCCTGCGGGTAATGCCGCACCAGCTGTGCCACCACCTCGACACCCGGCAGGC  >  NC_002947/5471155‑5471447

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.