New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5712442	46 (0.940)	3 (0.060)	3/252	NT	6.5%	coding (511/624 nt)	PP_5012	hypothetical protein
	?	NC_002947	= 5712482	42 (0.890)					coding (551/624 nt)	PP_5012	hypothetical protein

CTGCAACGCTGGCTTGGCCCGGTCGCCACGGCAATGCTGGCCGGCCATATCCGCCTGCGCGCTCGCTGGACTCGCCAAGGCCTGGCACGTTTCAGCCAGAACCTGTCCGAATACCTGGCCGAAGAATCCCGTACCCTGGTCGGCAAGCGCGAGGCCGAAGCCGCCTTCAGCGAGCTCGATGCCTTGAAGCTTGATACAGAACGCCTCGAAGCGCGCCTCAAGCGCCTGTCCCGATCCCTTGATACCAGCGATAACGCATGAAGCTGCTCGCCGTCCGACGTCTTTTTCGCATCCA  >  NC_002947/5712295‑5712589                                                                                                                                                    |                                                                                                                                                    cTGCAACGCTGGCTTGGCCCGGTCGCCACGGCAATGCTGGCCGGCCATATCCGCCTGCGCGCTCGCTGGACTCGCCAAGGCCTGGCACGTTTCAGCCAGAACCTGTCCGAATACCTGGCCGAAGAATCCCGTACCCTGGTCGGCAAgcg                                                                                                                                                    >  4:8059/1‑149 (MQ=255)  tGCAACGCTGGCTTGGCCCGGTCGCCACGGCAATGCTGGCCGGCCATATCCGCCTGCGCGCTCGCTGGACTCGCCAAGGCCTGGCACGTTTCAGCCAGAACCTGTCCGAATACCTGGCCGAAGAATCCCGTACCCTGGTCGGCAAgcgc                                                                                                                                                   >  7:252181/1‑149 (MQ=255)   gCAACGCTGGCTTGGCCCGGTCGCCACGGCAATGCTGGCCGGCCATATCCGCCTGCGCGCTCGCTGGACTCGCCAAGGCCTGGCACGTTTCAGCCAGAACCTGTCCGAATACCTGGCCGAAGAATCCCGTACCCTGGTCGGCAAgcgc                                                                                                                                                   >  2:306158/1‑148 (MQ=255)    cAACGCTGGCTTGGCCCGGTCGCCACGGCAATGCTGGCCGGCCATATCCGCCTGCGCGCTCGCTGGACTCGCCAAGGCCTGGCACGTTTCAGCCAGAACCTGTCCGAATACCTGGCCGAAGAATCCCGTACCCTGGTCGGCAAGCGCGa                                                                                                                                                 <  3:189465/149‑1 (MQ=255)    cAACGCTGGCTTGGCCCGGTCGCCACGGCAATGCTGGCCGGCCATATCCGCCTGCGCGCTCGCTGGACTCGCCAAGGCCTGGCACGTTTCAGCCAGAACCTGACCGAATACCTGGCCGAAGAATCCCGTACCCTGGTCGGCAAgcgc                                                                                                                                                   >  2:219613/1‑147 (MQ=255)     aaCGCTGGCTTGGCCCGGTCGCCACGGCAATGCTGGCCGGCCATATCCGCCTGCGCGCTCGCTGGACTCGCCAAGGCCTGGCACGTTTCAGCCAGAACCTGTCCGAATACCTGGCCGAAGAATCCCGTACCCTGGTCGGCAAGCGCGAg                                                                                                                                                <  1:306158/149‑1 (MQ=255)      aCGCTGGCTTGGCCCGGTCGCCACGGCAATGCTGGCCGGCCATATCCGCCTGCGCGCTCGCTGGACTCGCCAAGGCCTGGCACGTTTCAGCCAGCACCTGTCCGCATACCTGGCCGAAGAATCCCGTACCCTGGTCGGCAAGCGCGAgg                                                                                                                                               >  5:156446/1‑149 (MQ=255)      aCGCTGGCTTGGCCCGGTCGCCACGGCAATGCTGGCCGGCCATATCCGCCTGCGCGCTCGCTGGACTCGCCAAGGCCTGGCACGTTTCAGCCAGAACCTGTCCGAATACCTGGCCGAAGAATCCCGTACCCTGGTCGGCAAGCGCGAgg                                                                                                                                               >  8:10599/1‑149 (MQ=255)         cTGGCTTGGCCCGGTCGCCACGGCAATGCTGGCCGGCCATATCCGCCTGCGCGCTCGCTGGACTCGCCAAGGCCTGGCACGTTTCAGCCAGAACCTGTCCGAATACCTGGCCGAAGAATCCCGTACCCTGGTCGGCAAGCGCGAGGCCg                                                                                                                                            <  3:8059/149‑1 (MQ=255)                ggCCCGGTCGCCACGGCAATGCTGGCCGGCCATATCCGCCTGCGCGCTCGCTGGACTCGCCAAGGCCTGGCACGTTTCAGCCAGAACCTGTCCGAATACCTGGCCGAAGAATCCCGTACCCTGGTCGGCAAGCGCGAGGCCGAAgcc                                                                                                                                       <  4:112018/147‑1 (MQ=255)                  cccGGTCGCCACGGCAATGCTGGCCGGCCATATCCGCCTGCGCGCTCGCTGGACTCGCCAAGGCCTGGCACGTTTCAGCCAGAACCTGTCCGAATACCTGGCCGAAGAATCCCGTACCCTGGTCGGCAAGCGCGAGGCCGAAGCCGCCt                                                                                                                                   >  3:114987/1‑149 (MQ=255)                   ccGGTCGCCACGGCAATGCTGGCCGGCCATATCCGCCTGCGCGCTCGCTGGACTCGCCAAGGCCTGGCACGTTTCAGCCAGAACCTGTCCGAATACCTGGCCGTAGAATCCCGTACCCTGGTCGGCAAGCGCGAGGCCGAAGCCGCCtt                                                                                                                                  <  1:219613/149‑1 (MQ=255)                                        gccggccATATCCGCCTGCGCGCTCGCTGGACTCGCCAAGGCCTGGCACGTTTCAGCCAGAACCTGTCCGAATACCTGGCCGAAGAATCCCGTACCCTGGTCGGCAAGCGCGAGGCCGAAGCCGCCTTCAGCGAGCTCGATGCCTTGaa                                                                                                             <  7:10599/149‑1 (MQ=255)                                          cGGCCATATCCGCCTGCGCGCTCGCTGGACTCGCCAAGGCCTGGCACGTTTCAGCCAGAACCTGTCCGAATACCTGGCCGAAGAATCCCGTACCCTGGTCGGCAAGCGCGAGGCCGAAGCCGCCTTCAGCGAGCTCGATGCCTTGAAgc                                                                                                           >  2:72736‑M2/1‑147 (MQ=255)                                               atatCCGCCTGCGCGCTCGCTGGACTCGCCAAGGCCTGGCACGTTTCAGCCAGAACCTGTCCGAATACCTGGCCGAAGAATCCCGTACCCTGGTCGGCAAGCttctaggcatcgagctcgctgaaggcggcttcggcctcgcgcttgcc                                                                                                      <  2:190096‑M1/149‑48 (MQ=255)                                               atatCCCCCTGCGCGCTCGCTTGACTCGCCAAGGCCTGAAACCTTTCAGCCAGAACCTGTCCGAATACCAGGCCGAACAATCCCGAACCCTCGTCGTCAAGCCCGAGACCCAAGCCTCCTTCAGCGAACTCGATTCCTTGAAGCTTGa                                                                                                       >  8:210562/1‑148 (MQ=255)                                                tatCCGCCTGCGCGCTCGCTGGACTCGCCAAGGCCTGGCACGTTTCAGCCAGAACCTGTCCGAATACCTGGCCGAAGAATCCCGTACCCTGGTCGGCAAGCGCGAGGCCGAAGCCGCCTTCAGCGAGCTCGATGCCTTGAAGCTTGATa                                                                                                     <  7:225154/149‑1 (MQ=255)                                                 atCCGCCTGCGCGCTCGCTGGACTCGCCAAGGCCTGGCACGTTTCAGCCAGAACCTGTCCGAATACCTGGCCGAAGAATCCCGTACCCTGGTCGGCAAGCGCGAGGCCGAAGCCGCCTTCAGCGAGCTCGATGCCTTGAAGCTTGATa                                                                                                     >  3:211954/1‑148 (MQ=255)                                                 atCCGCCTGCGCGCTCGCTGGACTCGCCAAGGCCTGGCACGTTTCAGCCAGAACCTGTCCGAATACCTGGCCGAAGAATCCCGTACCCTGGTCGGCAAGCGCGAGGCCGAAGCCGCCTTCAGCGAGCTCGATGCCTTGAAGCTTGATa                                                                                                     >  4:90398/1‑148 (MQ=255)                                                 atCCGCCTGCGCGCTCGCTGGACTCGCCAAGGCCTGACACGTTTCAGCCAGAACCTGTCCGAATACCAGGCCGAAGAATCCCTTACCCTGGACGGCAAGCGCGAGTCCTAAGACGCCTTCAGCGAGCTCGATGCATTCAAGCTAGATa                                                                                                     >  3:158990/1‑148 (MQ=255)                                                  tCCGCCTGCGCGCTCGCTGGACTCGCCAAGGCCTGGCACGTTTCAGCCAGAACCTGTCCGAATACCTGGCCGAAGAATCCCGTACCCTGGTCGGCAAGCGCGAGGCCGAAGCCGCCTTCAGCGAGCTCGATGCCTTGAAGCTTGATAc                                                                                                    <  6:45920/148‑1 (MQ=255)                                                  tCCGCCTGCGCGCTCGCTGGACTCGCCAAGGCCTGGCACGTTTCAGCCAGAACCTGTCCGAATACCTGGCCGAAGAATCCCGTACCCTGGTCGGCAAGCGCGAGGCCGAAGCCGCCTTCAGCGAGCTCGATGCCTTGAAGCTTGATACa                                                                                                   <  8:144895/149‑1 (MQ=255)                                                       cTGCGCGCTCGCTGGACTCGCCAAGGCCTGGCACGTTTCAGCCAGAACCTGTCCGAATACCTGGCCGAAGAATCCCGTACCCTGGTCGGCAAGCGCGAGGCCGAAGCCGCCTTCAGCGAGCTCGATGCCTTGAAGCTTGATACAGAAc                                                                                               >  3:99565/1‑148 (MQ=255)                                                       cTGCGCGCTCGCTGGACTCGCCAAGGCCTGGCACGTTTCAGCCAGAACCTGTCCGAATACCTGGCCGAAGAATCCCGTACCCTGGTCGGCAAGCGCGAGGCCGAAGCCGCCTTCAGCGAGCTCGATGCCTTGAAGCTTGATACAGAAc                                                                                               <  4:99565/148‑1 (MQ=255)                                                        tGCGCGCTCGCTGGACTCGCCAAGGCCTGGCACGTTTCAGCCAGAACCTGTCCGAATACCTGGCCGAAGAATCCCGTACCCTGGTCGGCAAGCGCGAGGCCGAAGCCGCCTTCAGCGAGCTCGATGCCTTGAAGCTTGATACAGAACGc                                                                                             >  8:153458/1‑149 (MQ=255)                                                                   tGGACTCGCCAAGGCCTGGCACGTTTCAGCCAGAACCTGTCCGAATACCTGGCCGAAGAATCCCGTACCCTGGTCGGCAAGCGCGAGGCCGAAGCCGCCTTCAGCGAGCTCGATGCCTTGAAGCTTGATACAGAACGCCTCGAAgcgcg                                                                                  >  2:307316/1‑149 (MQ=255)                                                                     gACTCGCCAAGGCCTGGCACGTTTCAGCCAGAACCTGTCCGAATACCTGGCCGAAGAATCCCGTACCCTGGTCGGCAAGCGCGAGGCCGAAgccgc                                                                                                                                     >  4:290379/1‑96 (MQ=255)                                                                     gACTCGCCAAGGCCTGGCACGTTTCAGCCAGAACCTGTCCGAATACCTGGCCGAAGAATCCCGTACCCTGGTCGGCAAGCGCGAGGCCGAAGCCGCCTTCAGCGAGCTCGATGCCTTGAAGCTTGATACAGAACGCCTCGAAgcgcg                                                                                  <  8:252181/147‑1 (MQ=255)                                                                      aCTCGCCAAGGCCTGGCACGTTTCAGCCAGAACCTGTCCGAATACCTGGCCGAAGAATCCCGTACCCTGGTCGGCAAGCGCGAGGCCGAAGCCGCCTTCAGCGAGCTCGATGCCTTGAAGCTTGATACAGAACGCCTCGAAGCGCGcc                                                                                >  8:33031/1‑148 (MQ=255)                                                                          gCCAAGGCCTGGCACGTTTCAGCCAGAACCTGTCCGAATACCTGGCCGAAGAATCCCGTACCCTGGTCGGCAAGCGCGAGGCCGAAGCCGCCTTCAGCGAGCTCGATGCCTTGAAGCTTGATACAGAACGCCTCGAAGCGCGCCTCAAg                                                                           >  1:191688/1‑149 (MQ=255)                                                                           ccAAGGCCTGGCACGTTTCAGCCAGAACCTGTCCGAATACCTGGCCGAAGAATCCCGTACCCTGGTCGGCAAGCGCGAGGCCGAAGCCGCCTTCAGCGAGCTCGATGCCTTGAAGCTTGATACAGAACGCCTCGAAGCGCGCCTCAAgc                                                                          <  8:233914/149‑1 (MQ=255)                                                                           ccAAGGCCTGGCACGTTTCAGCCAGAACCTGTCCGAATACCTGGCCGAAGAATCCCGTACCCTGGTCGGCAAGCGCGAGGCCGAAGCCGCCTTCAGCGAGCTCGATGCCTTGAAGCTTGATACAGAACGCCTCGAAGCGCGCCTCAAgc                                                                          >  6:68777/1‑149 (MQ=255)                                                                                 ccTGGCACGTTTCAGCCAGAACCTGTCCGAATACCTGGCCGAAGAATCCCGTACCCTGGTCGGCAAGCGCGAGGCCGAAGCCGCCTTCAGCGAGCTCGATGCCTTGAAGCTTGATACAGAACGCCTCGAAGCGCGCCTCAAGCGCCTGt                                                                    <  7:181519/149‑1 (MQ=255)                                                                                   tGGCACGTTTCAGCCAGAACCTGTCCGAATACCTGGCCGAAGAATCCCGTACCCTGGTCGGCAAGCGCGAGGCCGAAGCCGCCTTCAGCGAGCTCGATGCCTTGAAGCTTGATACAGAACGCCTCGAAGCGCGCCTCAAgcgc                                                                        >  2:86922/1‑143 (MQ=255)                                                                                   tGGCACGTTTCAGCCAGAACCTGTCCGAATACCTGGCCGAAGAATCCCGTACCCTGGTCGGCAAGCGCGAGGCCGAAGCCGCCTTCAGCGAGCTCGATGCCTTGAAGCTTGATACAGAACGCCTCGAAGCGCGCCTCAAgcgc                                                                        <  1:86922/143‑1 (MQ=255)                                                                                   tGGCACGTTTCAGCCAGAACCTGTCCGAATACCTGGCCGAAGAATCCCGTACCCTGGTCGGCAAGCGCGAGGCCGAAGCCGCCTTCAGCGAGCTCGATGCCTTGAAGCTTGATACAGAACGCCTCGAAGCGCGCCTCAAGCGCCTGTcc                                                                  >  2:294/1‑149 (MQ=255)                                                                                    ggCACGTTTCAGCCAGAACCTGTCCGAATACCTGGCCGAAGAATCCCGTACCCTGGTCGGCAAGCGCGAGGCCGAAGCCGCCTTCAGCGAGCTCGATGCCTTGAAGCTTGATACAGAACGCCTCGAAGCGCGCCTCAAGCGCCTGTccc                                                                 >  1:128267/1‑149 (MQ=255)                                                                                     gCACGTTTCAGCCAGAACCTGTCCGAATACCTGGCCGAAGAATCCCGTACCCTGGTCGGCAAGCGCGAGGCCGAAGCCGCCTTCAGCGAGCTCGATGCCTTGAAGCTTGATACAGAACGCCTCGAAGCGCGCCTCAAGCGCCTGTccc                                                                 <  6:271412/148‑1 (MQ=255)                                                                                         gTTTCAGCCAGAACCTGTCCGAATACCTGGCCGAAGAATCCCGTACCCTGGTCGGCAAGCGCGAGGCCGAAGCCGCCTTCAGCGAGCTCGATGCCTTGAAGCTTGATACAGAACGCCTCGAAGCGCGCCTCAAGCGCCTGTCCCGATcc                                                            <  6:59026/149‑1 (MQ=255)                                                                                          tttCAGCCAGAACCTGTCCGAATACCTGGCCGAAGAATCCCGTACCCTGGTCGGCAAGCGCGAGGCCGAAGCCGCCTTCAGCGAGCTCGATGCCTTGAAGCTTGATACAGAACGCCTCGAAGCGCGCCTCAAGCGCCTGTCCCGATccc                                                           <  7:153458/149‑1 (MQ=255)                                                                                               gCCAGAACCTGTCCGAATACCTGGCCGAAGAATCCCGTACCCTGGTCGGCAAGCttcaaggcatcgagctcgctgaaggcggcttcggcctcgcgcttg                                                                                                        >  7:35295‑M1/1‑54 (MQ=255)                                                                                               gCCAGAACCTGTCCGAATACCTGGCCGAAGAATCCCGTACCCTGGTCGGCAAGCttcaaggcatcgagctcgctgaaggcggcttcggcctcgcgcttg                                                                                                        <  8:35295‑M1/99‑46 (MQ=255)                                                                                                    aaCCTGTCCGAATACCTGGCCGAAGAATCCCGTACCCTGGTCGGCAAGCGCGAGGCCGAAGCCGCCTTCAGCGAGCTCGATGCCTTGAAGCTTGATACAGAACGCCTCGAAGCGCGCCTCAAGCGCCTGTCCCGATCCCTTGATACCAg                                                 >  8:117439/1‑149 (MQ=255)                                                                                                     aCCTGTCCGAATACCTGGCCGAAGAATCCCGTACCCTGGTCGGCAAGCGCGAGGCCGAAGCCGCCTTCAGCGAGCTCGATGCCTTGAAGCTTGATACAGAACGCCTCGAAGCGCGCCTCAAGCGCCTGTCCCGATCCCTTGATACCAGc                                                <  7:117439/149‑1 (MQ=255)                                                                                                          tCCGAATACCTGGCCGAAGAATCCCGTACCCTGGTCGGCAAGCGCGAGGCCGAAGCCGCCTTCAGCGAGCTCGATGCCTTGAAGCTTGATACAGAACGCCTCGAAGCGCGCCTCAAGCGCCTGTCCCGATCCCTTGATACCAGCGATa                                            <  4:114987/148‑1 (MQ=255)                                                                                                            cGAATACCTGGCCGAAGAATCCCGTACCCTGGTCGGCAAGCGCGAGGCCGAAGCCGCCTTCAGCGAGCTCGATGCCTTGAAGCTTGATACAGAACGCCTCGAAGCGCGCCTCAAGCGCCTGTCCCGATCCCTTGATACCAGCGATAAc                                          <  5:68777/148‑1 (MQ=255)                                                                                                             gAATACCTGGCCGAAGAATCCCGTACCCTGGTCGGCAAGCGCGAGGCCGAAGCCGCCTTCAGCGAGCTCGATGCCTTGAAGCTTGATACAGAACGCCTCGAAGCGCGCCTCAAGCGCCTGTCCCGATCCCTTGATACCAGCGATAACGc                                        <  7:33031/149‑1 (MQ=255)                                                                                                               aTACCTGGCCGAAGAATCCCGTACCCTGGTCGGCAAGCGCGAGGCCGAAGCCGCCTTCAGCGAGCTCGATGCCTTGAAGCTTGATACAGAACGCCTCGAAGCGCGCCTCAAGCGCCTGTCCCGATCCCTTGATACCAGCGATAACGCa                                       <  2:191688/148‑1 (MQ=255)                                                                                                                        cGAAGAATCCCGTACCCTGGTCGGCAAGCGCGAGGCCGAAGCCGCCTTCAGCGAGCTCGATGCCTTGAAGCTTGATACAGAACGCCTCGAAGCGCGCATCAAGCGCCTGTCCCGATCCCTTGATACCAGCGATAACGCATGAAgctgct                             >  4:47551/1‑149 (MQ=255)                                                                                                                         gaagaaTCCCTTACCCTGGTCGGCAAGCGCGAGGCCGAAGCCGCCTTCAGCGAGCTCGATGCCTTGAAGCTTGATACAGAACGCCTCGAAGCGCGCCTCAAGCGCCTGTCCCGATCCCTTGATACCAGCGATAACGCATGAAGCTGCTc                            <  7:210562/149‑1 (MQ=255)                                                                                                                         gaagaaTCCCGTACCCTGGTCGGCAAGCGCGAGGCCGAAGCCGCCTTCAGCGAGCTCGATGCCTTGAAGCTTGATACAGAACGCCTCGAAGCGCGCCTCAAGCGCCTGTCCCGATCCCTTGATACCAGCGATAACGCATGAAgctgc                              >  6:254540/1‑147 (MQ=255)                                                                                                                         gaagaaTCCCGTACCCTGGTCGGCAAGCGCGAGGCCGAAGCCGCCTTCAGCGAGCTCGATGCCTTGAAGCTTGATACAGAACGCCTCGAAGCGCGCCTCAAGCGCCTGTCCCGATCCCTTGATACCAGCGATAACGCATGAAgctgc                              <  5:254540/147‑1 (MQ=255)                                                                                                                                 ccGTACCCTGGTCGGCAAGCGCGAGGCCGAAGCCGCCTTCAGCGAGCTCGATGCCTTGAAGCTTGATACAGAACGCCTCGAAGCGCGCCTCAAGCGCCTGTCCCGATc                                                             <  2:53086/108‑1 (MQ=255)                                                                                                                                 ccGTACCCTGGTCGGCAAGCGCGAGGCCGAAGCCGCCTTCAGCGAGCTCGATGCCTTGAAGCTTGATACAGAACGCCTCGAAGCGCGCCTCAAGCGCCTGTCCCGATCCCTTGATACCAGCGATAACGCATGAAGCTGCTCGCCGTcc                     <  4:211954/148‑1 (MQ=255)                                                                                                                                     aCCCTGGTCGGCAAGCGCGAGGCCGAAGCCGCCTTCAGCGAGCTCGATGCCTTGAAGCTTGATACAGAACGCCTCGAAGCGCGCCTCAAGCGCCTGTCCCGATCCCTTGATACCAGCGATAACGCATGAAGCTGCTCGCCGTCCGACGt                >  6:103384/1‑149 (MQ=255)                                                                                                                                              ggCAAGCGCGAGGCCGAAGCCGCCTTCAGCGAGCTCGATGCCTTGAAGCTTGATACAGAACGCCTCGAAGCGCGCCTCAAGCGCCTGTCCCGATCCCTTGATACCAGCGATAACGCATGAAGCTGCTCGCCGTCCGACGTCTTTTTCg        >  3:123063/1‑148 (MQ=255)                                                                                                                                              ggCAAGCGCGAGGCCGAAGCCGCCTTCAGCGAGCTCGATGCCTAGAAgcttgccgaccagggtacgggattcttcggccaggtattcggacaggttctggctgaaacgtgccaggccttggcgagtccagcgagcgcgcaggcggatat       <  2:190096‑M2/149‑103 (MQ=255)                                                                                                                                                cAAGCGCGAGGCCGAAGCCGCCTTCAGCGAGCTCGATGCCTTGAAgcttgccgaccagggtacgggattcttcggccaggtattcggacaggttctggc                                                       >  7:35295‑M2/1‑45 (MQ=255)                                                                                                                                                cAAGCGCGAGGCCGAAGCCGCCTTCAGCGAGCTCGATGCCTTGAAgcttgccgaccagggtacgggattcttcggccaggtattcggacaggttctggc                                                       <  8:35295‑M2/99‑55 (MQ=255)                                                                                                                                                 aaGCGCGAGGCCGAAGCCGCCTTCAGCGAGCTCGATGCCTTGAAGCTTGATACAGAACGCCTCGAAGCGCGCCTCAAGCGCCTGTCCCGATCCCTTGAt                                                      <  7:97548/99‑1 (MQ=255)                                                                                                                                                 aaGCGCGAGGCCGAAGCCGCCTTCAGCGAGCTCGATGCCTTGAAGCTTGATACAGAACGCCTCGAAGCGCGCCTCAAGCGCCTGTCCCGATCCCTTGAt                                                      >  8:97548/1‑99 (MQ=255)                                                                                                                                                   gcgcGAGGCCGAAGCCGCCTTCAGCGAGCTCGATGCCTTGAAGCTTGATACAGAACGCCTCGAAGCGCGCCTCAAGCGCCTGTCCCGATCCCTTGATACCAGCGATAACGCATGAAGCTGCTCGCCGTCCGACGTCTTTTTCGCATCCa  <  3:90398/149‑1 (MQ=255)                                                                                                                                                   gCttcaaggcatcgagctcgctgaaggcggcttcggcctcgcgcttgccgaccagggtacgggattcttcggccaggtattcggacaggttctggctgaaacgtgccaggccttggcgagtccagcgagcgcgcaggcggatatggccg  >  2:72736‑M1/1‑2 (MQ=255)                                                                                                                                                    |                                                                                                                                                    CTGCAACGCTGGCTTGGCCCGGTCGCCACGGCAATGCTGGCCGGCCATATCCGCCTGCGCGCTCGCTGGACTCGCCAAGGCCTGGCACGTTTCAGCCAGAACCTGTCCGAATACCTGGCCGAAGAATCCCGTACCCTGGTCGGCAAGCGCGAGGCCGAAGCCGCCTTCAGCGAGCTCGATGCCTTGAAGCTTGATACAGAACGCCTCGAAGCGCGCCTCAAGCGCCTGTCCCGATCCCTTGATACCAGCGATAACGCATGAAGCTGCTCGCCGTCCGACGTCTTTTTCGCATCCA  >  NC_002947/5712295‑5712589

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.